Marinobacter nanhaiticus: RE428_26130
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Entry
RE428_26130 CDS
T10288
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
mnk Marinobacter nanhaiticus
Pathway
mnk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RE428_26130 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mnk01007
]
RE428_26130 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mnk03016
]
RE428_26130 (serS)
Enzymes [BR:
mnk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
RE428_26130 (serS)
Amino acid related enzymes [BR:
mnk01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RE428_26130 (serS)
Transfer RNA biogenesis [BR:
mnk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RE428_26130 (serS)
Prokaryotic type
RE428_26130 (serS)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
UPF0242
OmpH
Motif
Other DBs
NCBI-ProteinID:
BES71595
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All DBs
Position
complement(2883739..2885016)
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AA seq
425 aa
AA seq
DB search
MLDPKRVRNQTEDIARRLAVRNYTFDVEAFQSLESRRRSLQVRTEELQSEQNKRSKAIGK
AKAAGEDIQPLLDAVEDLKRQRGDAEDELRALQEELNAFLSGIPNVPDDSVPEGKDEDDN
VELRTWGNVPAFDFEPKDHVDLGQGVHGLDFETAGRLAQSRFAVMRGPVARLHRALAQFM
LNTHTDEHGYSETYLPYLVNANTLYGTGQLPKFEEDLFKMEGEHPLYLIPTAEVPATNLV
GDSILKPEELPLRMVCHTPCFRSEAGSYGRDTRGMIRQHQFDKVELIHVVRPEDSDEALE
QLTGHAEKILQKLELPYRVVALCGGDIGFSAAKTYDLEVWLPGQGKYREISSCSNTRDFQ
ARRMQARWRNPETGKPEFVHTLNGSGLAVGRALIAVMENYQQADGSIRIPEVLQPYMGGI
DVIRP
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcccaaacgtgttcggaaccagactgaagacattgcccgccgacttgccgtg
cgcaactacaccttcgatgtggaggctttccagtccctggaatcccgtcgccggtctctc
caggtcaggactgaagaactccagagcgagcagaacaagcgatcgaaggcgatcggcaag
gccaaggcggccggtgaagatatccagccgctgctggatgcggtcgaagatctcaaacgg
cagcgtggggatgcggaagatgaactgcgggcgctgcaggaagagctcaatgcgttcctg
tccggcatcccgaatgtcccggacgacagtgtcccggaaggcaaggacgaagacgacaat
gtcgagcttcggacctggggcaacgtgccggcgttcgatttcgagccaaaggaccatgtg
gatctcgggcagggcgttcacggcctggatttcgagacagccggccgactggcgcaatcc
cggttcgcggtgatgcgtggtccggtggctcgcctgcatcgtgcactggcgcaattcatg
ctcaacacccacacggacgagcacggttattccgagacctacctgccgtacctggttaat
gcaaatacgctgtatggcaccggtcagttgccgaaattcgaggaagacctgttcaagatg
gagggtgaacatcccctctacctgatcccgacggcggaggtgcccgccaccaacctggtc
ggcgacagcatcctcaagcccgaggagttgcccttgcggatggtttgtcataccccgtgt
ttccgcagcgaagcgggatcatacggtcgcgacactcggggcatgatacggcagcaccag
ttcgacaaggtggaattgattcacgtggtgcgtccggaagattccgatgaggcgctggag
cagctgaccgggcatgcggagaagatcctgcagaagctggaactgccataccgggttgtg
gccctctgcggcggtgatattggcttctccgcagcgaaaacctatgacctggaagtgtgg
ctgccggggcagggtaaataccgggagatttcctcctgcagcaacacccgggatttccag
gcgcgtcgcatgcaggcgcgttggcgcaacccggaaaccggaaagccggaattcgtgcat
accttgaacggctctgggctggcggttgggcgggcgctgatcgccgtcatggagaattac
cagcaggccgacggcagcatccgtattccggaagtactacagccctacatgggcggcatc
gacgtaatacggccttga
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