Marinobacter nanhaiticus: RE428_28920
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Entry
RE428_28920 CDS
T10288
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mnk Marinobacter nanhaiticus
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mnk03016
]
RE428_28920 (truD)
Enzymes [BR:
mnk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
RE428_28920 (truD)
Transfer RNA biogenesis [BR:
mnk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RE428_28920 (truD)
Prokaryotic type
RE428_28920 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BES71874
LinkDB
All DBs
Position
complement(3214270..3215250)
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AA seq
326 aa
AA seq
DB search
MSQWRLDWPPASGQRLGTCVLRQEADDFQVDELIDIEFTGEGEHLCLRLQKTGDNTEFVA
KELARMAGLRPFDVSFCGLKDRHAVTRQWFSLYRPGKPDDTAFINTVNERWPVLDHSRHR
RKLRRGEHLGNHFRLRLREVTAGQAEVDQRLSRIALEGVPNYFGPQRFGRDGGNLAKAVA
DGGRPRRGRNFKAGLAFSAARSWLFNEILAERVEQGNWHRTLEGEPSSEPTGPLWGDGGT
SAAGVAADLEWAVVDRFPEVKAVFSSTRMKPERRSLALPLSGLTWTWESSDTLFLDFVLG
AGGFATALVAEILDAVSGGPVTNPAS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtggcgcctggattggccaccggcttcggggcagcgactcggtacctgtgtg
ctgcgccaggaagcggacgatttccaggttgatgaactgatcgatatcgagtttaccggc
gagggagagcatctctgtctgcggctgcaaaaaaccggtgacaacaccgagttcgtagcg
aaggagctggctcgaatggccggtttgaggccctttgatgtcagcttctgcggactgaag
gatcggcacgcagtgacgcgtcaatggtttagtctttaccgcccgggcaaacccgacgac
acagcttttatcaacacggtcaacgagcgatggccagtactggaccacagtcgtcaccgc
cgtaagctgcggcgcggcgagcatctgggcaatcactttcgcctgcgcttgcgagaagtc
accgccggccaggcggaggtcgatcagcgcctatcccgaatcgcgctcgaaggtgtaccc
aattacttcggtccccagcgttttggtcgcgatggcggcaacctggctaaggccgttgcc
gacgggggtcggccaagacgagggcgcaacttcaaggctggtcttgctttttccgctgca
cgttcctggctgttcaatgagatcttggccgagcgggtcgagcagggcaactggcaccgg
acgcttgagggcgaaccgtcatccgaacccacggggccactctggggcgatggtggcacc
tcggcggcaggcgtggcagcggatcttgaatgggctgtggttgatcgttttcccgaggtt
aaagcggtgttttcctccacacgcatgaagccggaacgtcgatctctggccctaccgctc
agcggtctcacatggacctgggaatccagtgatacactctttctcgacttcgtgctgggt
gccggcggctttgccacggcgttagtggctgaaattctggatgccgtgtctggcgggcct
gttacaaacccggcatcataa
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