Marinobacter nanhaiticus: RE428_30350
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Entry
RE428_30350 CDS
T10288
Symbol
groL_1
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mnk Marinobacter nanhaiticus
Pathway
mnk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RE428_30350 (groL_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnk03019
]
RE428_30350 (groL_1)
03110 Chaperones and folding catalysts [BR:
mnk03110
]
RE428_30350 (groL_1)
03029 Mitochondrial biogenesis [BR:
mnk03029
]
RE428_30350 (groL_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mnk04147
]
RE428_30350 (groL_1)
Enzymes [BR:
mnk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RE428_30350 (groL_1)
Messenger RNA biogenesis [BR:
mnk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RE428_30350 (groL_1)
Chaperones and folding catalysts [BR:
mnk03110
]
Heat shock proteins
HSP60 / Chaperonin
RE428_30350 (groL_1)
Mitochondrial biogenesis [BR:
mnk03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RE428_30350 (groL_1)
Exosome [BR:
mnk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RE428_30350 (groL_1)
Exosomal proteins of other body fluids (saliva and urine)
RE428_30350 (groL_1)
Exosomal proteins of breast cancer cells
RE428_30350 (groL_1)
Exosomal proteins of colorectal cancer cells
RE428_30350 (groL_1)
Exosomal proteins of bladder cancer cells
RE428_30350 (groL_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
DHC_N2
Motif
Other DBs
NCBI-ProteinID:
BES72017
LinkDB
All DBs
Position
complement(3383089..3384738)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDVKFGDSARKRMVAGVNILADAVKVTLGPKGRNVVLDKSFGAPTVTKDGVSVAKEI
ELKDKFENMGAQMVKEVASQTNDTAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKATQVAVKAIREMAKPCDDSRNIAQVGTISANGDETIGKIIADAMERVGKEGVITVEEG
RGLEDELDVVEGMQFDRGYLSPYFINNQDNMSAELDDPYILLVDKKISNIRELLPVLESV
AKAGKPLMIIAEDIEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKEMLQDIAILSGGTV
ISEEVGLTLENTTLDDLGTAKRVNITKENTTIIDGAGAQADIEARVEQIRKQIEDSSSDY
DKEKLQERVAKLAGGVAVIKVGAGSEVEMKEKKARVEDALHSTRAAVEEGIVAGGGVTLI
RALAALDSVAADNEEQKAGVNILRRAMEAPLRQIVTNAGGEASVVVDKVRSGDGSYGYNA
ATEGYGDMLEMGILDPAKVTRSALQAAASVAGLMITTEAMVTDEPEDEKGGGMPDMGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgttaaatttggcgactcagcccgcaagcgcatggttgcaggcgtc
aacatcctggctgacgccgtcaaggtgaccctgggcccgaaaggccgcaacgtggttctg
gacaagtccttcggcgcaccgaccgtgaccaaggacggtgtatccgtggctaaggaaatc
gaactgaaagacaagttcgagaacatgggtgcgcagatggtcaaggaagttgcttcccag
accaacgacaccgccggtgacggtaccacgactgcaaccgttcttgcccagtccatcgtc
aatgaaggtctgaaggccgttgctgcaggcatgaacccgatggacctgaagcgcggtatc
gacaaggccacccaagtggctgtgaaggcgatccgtgaaatggccaagccttgtgacgac
agccgcaacattgcccaggtcggcaccatttccgccaacggcgacgagacaatcggcaag
atcatcgccgatgccatggagcgcgtaggtaaggaaggtgtcatcaccgttgaggaaggc
cgtggcctggaagacgagctggatgtggtcgaaggtatgcagttcgaccgcggttacctg
tctccgtacttcatcaacaatcaggacaatatgtccgctgaacttgacgacccatacatc
ctgctggtcgacaagaagatctccaacatccgcgaactgctgccggtcctcgaaagcgtg
gccaaggctggcaagccgctgatgatcatcgccgaagatatcgaaggcgaagcgctggcg
actctggtcgtaaacaacatgcgcggcatcgtcaaggttgctgccgtgaaggcgccgggc
ttcggtgatcgtcgtaaggaaatgctgcaggacatcgctatcctgtccggcggtaccgtg
atctccgaagaagttggcctgaccctggaaaacaccaccctggatgacctgggtacagcc
aagcgtgtcaatatcaccaaggaaaacaccaccatcatcgatggcgctggtgcccaggct
gatatcgaagcgcgcgtcgagcagatccgcaagcagatcgaagacagctcctccgactat
gacaaggaaaagctgcaagagcgcgtggccaagctggctggcggtgttgccgtcatcaag
gttggtgccggttctgaagtggaaatgaaagagaagaaggcccgtgtcgaagatgcgctg
cactccacccgcgctgcggttgaagaaggcatcgtcgctggcggtggcgttaccctgatc
cgtgccctggcggcactggacagcgtggcagccgacaacgaagaacagaaggccggcgtc
aatatcctgcgtcgtgcgatggaagcgcctctgcgccagatcgtcaccaacgcaggtggc
gaagcctctgttgtggtcgacaaggttcgttccggtgacggtagctacggctacaacgcc
gcgaccgaaggctacggcgacatgctggaaatgggtatcctggaccctgccaaggtcacc
cgttcagccctgcaggcagccgcttccgttgccggcctgatgatcaccaccgaagcgatg
gtgactgatgagccggaagacgagaaaggcggtggcatgccggatatgggcggcatgggt
ggaatgggtggtatgggcggcatgatgtaa
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