Marinobacter nanhaiticus: RE428_35160
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Entry
RE428_35160 CDS
T10288
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mnk Marinobacter nanhaiticus
Pathway
mnk03410
Base excision repair
mnk03430
Mismatch repair
mnk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RE428_35160 (recJ)
03430 Mismatch repair
RE428_35160 (recJ)
03440 Homologous recombination
RE428_35160 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnk03400
]
RE428_35160 (recJ)
DNA repair and recombination proteins [BR:
mnk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RE428_35160 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RE428_35160 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RE428_35160 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
SIS_2
Motif
Other DBs
NCBI-ProteinID:
BES72498
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All DBs
Position
complement(3871413..3873149)
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AA seq
578 aa
AA seq
DB search
MTPRKIIRRPLPEHPADWGHSLPPLLRRLYQARGVQSEVELDYTLKQLASPFDLRGIDRA
VELIAEAIQQGQRILILGDFDADGATSTAVAILGLQMMGARHLDFRVPSRFSDGYGLTPG
IIDRLREEGALPDLLITVDNGISAIEGVEAARHHGMRVVVTDHHLPGETLPPADAIVNPN
QHGCPFLSKNAAGVGVMFYVLTALRRFMSDRGLLQGPPPNLGCLLDLVALGTVADVVPLD
QNNRIFVEQGLRRIRQGEARPGILALLEVAGREYSQISATDLGFVVGPRLNAAGRLDDMS
LGIACLLADTPVEARRLATELDQMNRERRTIETGMKEQAQDLLASLSLDREGLPWGLALF
DPDWHQGVIGILAARIREQTHRPVIAFAPDDGGKLIKGSARSIPGLHIRDVLASLDARNP
GLLQKFGGHAMAAGMTIAADAFQQFAEAFDATVRSTITEDALEATITTDGPLGLDELTLD
TAYTLKRSGPWGQHFPEPVFDGEFEVINQRIVGERHLKLVLRPRNGGDILDGIAFNTGAE
VPDFTVTGARVVYKPDANTFRGRTQLQLLVDYIEPVQG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgacgccacgcaagattatccggcgtcccctgccggagcaccccgccgattggggccat
tccctgccgccgttgctcaggcgcctctaccaggcccgtggcgtgcagtccgaggtcgag
ctcgattacaccctgaagcaattggcatcgccgtttgacctgcgcggcatcgatcgtgcg
gttgagctgatagccgaggcgatccagcagggacaacggatcctgatccttggtgacttc
gatgccgatggtgcaaccagtactgcggtggccattctgggattgcagatgatgggcgcg
cgtcacctggatttccgggtgcccagccgcttctccgacgggtacggtttgacgccgggg
atcatcgaccgactgcgagaggaaggcgcgttacctgatctgttgattaccgtcgacaac
ggtatctctgccatcgagggtgtcgaagccgcccgacatcatgggatgcgtgtggtggtt
actgatcatcacctgccaggcgagaccctgcccccggcggatgccatcgtgaatcccaac
cagcatggatgtcctttcctgagcaagaatgccgctggtgtgggggtcatgttctatgta
ctgaccgccctgcgccgctttatgagcgatcgggggttattgcagggtccgccgccgaac
ctgggctgcctactcgacctggtggcattggggaccgtggccgatgtggtgccgttggac
cagaacaaccgcattttcgtcgagcagggactgcgccggatccgacagggcgaagcccgg
ccgggtatcctggcattgctggaggtcgccggccgcgagtacagccagatcagtgcaaca
gacctgggttttgtcgtgggcccgcgtctgaacgctgcgggacgccttgatgacatgagt
ttgggtattgcctgtctgttggcggatacgcccgtcgaggcgcgccgtctggcgactgaa
ctggatcagatgaaccgcgagcgacgcacgattgaaacggggatgaaggagcaagcccag
gacctgcttgcatccctgtcacttgatagggaagggttaccctgggggctggcgctgttc
gacccggactggcaccaaggggtgatcggcatccttgcggcgcggatccgcgaacagacc
catcggccggtgattgcctttgccccggacgacggcggcaaacttatcaagggatcggca
cgctctattccggggctgcatatccgcgatgtgctagcgtcgctggacgcccgcaatcct
ggcctgctgcaaaaattcggtggtcacgccatggcggcgggaatgacgatcgccgcagat
gctttccagcaatttgccgaggccttcgacgccacggtacgcagcacgattaccgaagat
gccctggaggcgacgattaccaccgacgggccgctaggtctcgatgagttgacgctggac
acagcctatacgctgaagcgctcgggcccttgggggcagcactttccggagccggtcttc
gatggcgaattcgaagtgatcaatcagcgtattgtcggtgagcgtcacctcaagctggtg
ctccggcccaggaatggtggcgatatcctcgatgggatcgccttcaataccggagccgaa
gttcctgatttcactgttaccggcgcccgggtagtctacaagccggacgccaacaccttc
cgcggtcggacccagctccagttgctggtggattacatcgagccggtgcagggctga
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