Marinobacter nanhaiticus: RE428_35670
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Entry
RE428_35670 CDS
T10288
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mnk Marinobacter nanhaiticus
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnk03400
]
RE428_35670 (phrB)
Enzymes [BR:
mnk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RE428_35670 (phrB)
DNA repair and recombination proteins [BR:
mnk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RE428_35670 (phrB)
Prokaryotic type
RE428_35670 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BES72549
LinkDB
All DBs
Position
3918858..3920258
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AA seq
466 aa
AA seq
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MPQLVWFRNDLRVADNPALVAACNEDDKVEACFILTPDQWQEHDWSPARVNLILDHVEDL
GRQLAGLGIPLHILQAKRFSESLDALEKLTKERSVTTVHINEEYAVNERRRDKTAHQRLQ
KLDIALHKYRDQTVAPVGTILTQQDQPYSVFTPFSRSWWDWVEKANPQSLAIPKPQGPKI
KAPERPQTPSNFRKAPPPLVKSGEDAAHDALQEFLDERANHYKDERDFPSLNGTSLLSPY
LASGILSGRQCVQAGREALKSQPSSKGIRTWLNEICWRDFYVNILYHYPRVSMHRAFKPE
TEELTWNDPENVLEAWKEGRTGVPLVDAAMRQLNETGWMHNRLRMVTAMFLSKNLFLDWR
LGEAYFMQNLVDGFLASNNGGWQWSASTGTDAAPYFRVFNPMTQSERFDPRGDFIRRYLP
ELRDLDNKRIHNPSAGGTVPKGYVRPIVDLKESRKDAIARFQALKK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaactggtctggttccgcaacgacctccgcgtcgccgacaacccggccctggtg
gccgcctgcaatgaggatgataaggtcgaagcgtgtttcatcctgacgccggaccaatgg
caggagcatgactggtcgcccgcacgggtcaacctcatcctcgaccacgttgaagacctc
gggcgacagcttgcgggactcggcattcccctgcatatcctgcaggcgaagcgcttcagc
gaaagcctggacgctctggaaaagctgacaaaggaacgcagcgtcactacggtccatatc
aacgaggagtatgcggtcaacgaaagacgccgggacaagacggcgcaccagcgtctgcag
aagctggacatcgcactgcacaaataccgggaccagaccgtcgcgcccgtcggcacaatc
ctcacccagcaggaccagccctattcggtgttcacaccgttttcacgcagttggtgggac
tgggtcgagaaagccaatccccagagcctggcaatccccaaaccccagggtccaaaaatc
aaggcgccagaacgcccccaaacgccttcgaacttccgcaaggcgccgcccccattggtc
aagagcggtgaagatgccgcacatgatgcgctacaggaatttctcgatgagcgcgcgaac
cactacaaggacgagcgcgatttcccgtcgctcaatgggacgagcctgctctcgccgtat
ctggccagtggcatcctgtccggccgccaatgcgtgcaagctgggcgggaagcgctaaag
tcccaacccagctccaagggcatccgcacctggctcaacgaaatctgctggcgtgatttc
tacgtcaacatcctctatcactatccgcgagtcagcatgcaccgggccttcaaaccggag
acggaggagctcacctggaacgaccctgagaatgtattggaggcctggaaggaaggacgt
accggggtgccactggtggatgctgccatgcgccagctcaacgagaccggctggatgcac
aatcgactgcggatggtgaccgcgatgttcctgtcgaagaacctgttcctcgactggcgg
ctgggtgaagcctacttcatgcagaacctggtggatggcttcctcgcctccaacaacggc
ggctggcagtggagcgcatccaccggcaccgatgcagcgccctacttccgggtatttaac
ccgatgacgcagagtgagcgcttcgacccacgcggggacttcattcgccgctacctgccc
gaactgcgggacctggacaataaacgtatccacaatccatccgccggcggcaccgtgcct
aagggttacgttcgccccatcgtcgacctcaaggaaagtcgtaaggatgccatcgcccgg
tttcaggccctgaaaaaataa
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