Marinobacter nanhaiticus: RE428_39240
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Entry
RE428_39240 CDS
T10288
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
mnk Marinobacter nanhaiticus
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnk03400
]
RE428_39240
Enzymes [BR:
mnk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
RE428_39240
DNA repair and recombination proteins [BR:
mnk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
RE428_39240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
5_nucleotid
Motif
Other DBs
NCBI-ProteinID:
BES72906
LinkDB
All DBs
Position
4327006..4328538
Genome browser
AA seq
510 aa
AA seq
DB search
MRNLILILGDQLTTDISALKDADPKRDRIVMAEVRDEASYTNHHKKKIVLLFSAMRHFAQ
RLENEGWQVQYYRYSPKSRHNSLFDVVQAQVKKFSPDRLVTTECGEWRLDADIRKWEKSL
ELPVEIRLDDRFIATKDEFARWAEGRKQLRMEFFYREMRKKTGLLMTPDGGPEGDHWNFD
ADNRRKWTGKPPAPAPFRVEPDRITQEVIELVDKEFKDHFGTTDDFHFAVTPEDAEEALA
HFLDFALPCFGDFQDAMSDDEDWLFHSILSPYINCGLLNPLGVCEAAAQHYYSGQAPLNA
VEGFVRQIIGWREFVRGIYWLLMPDYARENRLGNTRKLPWFYWTGETDMRCMHQAIDATR
RNGYAHHIQRLMVTGNFALLAGVKPEDICDWYLAVYADAYDWVELPNTLGMVMHADGGYL
GSKPYAASGKYIQRMSDYCSQCKYNVAKATEEDACPFNALYWHFIDRHRKAFEGNPRMGM
MYRNWDRQKPDRREALLTRAEWLLEHVEEL
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacctcatcctgatcctcggcgatcagctcaccaccgacatcagcgcgctcaag
gacgcggatccgaagcgggacagaatcgtcatggcagaggttcgggatgaggccagctac
accaaccaccacaagaagaagatcgtgctgctgttcagcgccatgcggcatttcgcccag
cgcctggaaaacgaaggttggcaggtccagtactaccgttactcaccaaaaagccgccac
aactcgctattcgatgtggttcaggcgcaggtgaaaaagttcagtcccgacaggctcgtc
actaccgaatgtggggaatggcgactcgatgcggatatccgcaagtgggaaaagtcgctg
gaactcccggtggagatccgcctcgacgatcgctttatcgcgaccaaggacgagtttgcg
cgctgggccgagggtcgcaagcaactaagaatggagttcttctaccgcgagatgcgaaag
aagaccggcctgctgatgacgccggacggcggccccgagggcgaccactggaatttcgat
gccgacaaccggcgcaagtggaccggcaaaccgcctgcgcccgcgcctttccgggtggag
ccggacaggattacccaagaagtcatcgaactggtggacaaggaattcaaggatcacttt
ggcaccacggatgatttccacttcgcagtgacacccgaagacgccgaggaagccctggcc
catttcctggatttcgccttgccctgtttcggtgacttccaggatgccatgtccgacgac
gaagactggctatttcactccatcctctcgccttatatcaattgcggtctgctaaacccg
ctcggcgtatgcgaggcggccgcgcagcactattattccggccaggcgccgctcaatgcg
gtggaaggctttgtccgccagattatcggctggcgcgaattcgtgcgcggcatctactgg
ttgctgatgcccgactatgccagggaaaaccggctcggcaacacgcgtaaactcccctgg
ttctactggaccggtgagaccgacatgcgctgcatgcaccaggctatcgatgccacccgc
cgcaacggctacgcccaccatatccagcggctgatggtcacgggcaactttgccctgttg
gccggcgtaaaaccggaggacatctgcgactggtacctggcggtctatgccgacgcctac
gactgggtcgaactgcccaacaccctgggcatggtaatgcacgcggatggcggttacctg
gggtccaaaccctacgccgccagcggcaagtatatccagcgcatgtccgactactgcagc
cagtgcaagtacaacgtggccaaggccactgaggaggatgcctgcccgttcaacgcgctt
tactggcacttcatcgaccgtcatcgcaaggcctttgagggtaatccccgcatgggtatg
atgtaccgcaattgggatcgccagaagccggatcggcgcgaagcccttctgaccagggcc
gagtggctgctggagcatgtggaggagctgtaa
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