Marinobacter nanhaiticus: RE428_39910
Help
Entry
RE428_39910 CDS
T10288
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mnk Marinobacter nanhaiticus
Pathway
mnk03030
DNA replication
mnk03430
Mismatch repair
mnk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RE428_39910
03430 Mismatch repair
RE428_39910
03440 Homologous recombination
RE428_39910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnk03032
]
RE428_39910
03400 DNA repair and recombination proteins [BR:
mnk03400
]
RE428_39910
Enzymes [BR:
mnk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RE428_39910
DNA replication proteins [BR:
mnk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RE428_39910
DNA repair and recombination proteins [BR:
mnk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RE428_39910
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
GIY-YIG_UvrC
UvrC_M
Cho_C
GIY-YIG
GIY_YIG_2
RNase_H_2
Phage_spike_2
Motif
Other DBs
NCBI-ProteinID:
BES72973
LinkDB
All DBs
Position
complement(4398246..4399718)
Genome browser
AA seq
490 aa
AA seq
DB search
MSSMNDLLPFLDSCTLAFLDLETTGGNAAHDRITEVGIRFWRDGEVVDEWQTLLNPETRI
SPFIEQLTGISNQMVADAPLFEDIADTLRAKLKGCVFVAHNARFDYGFVKSEFRRLGQAF
SARVLCTVKLSRKLYPAYRRHNMDALIARHGLPVVQRHRAMGDVEAMHAFFETAMGDHGA
GMVEYAARELLKRPSVPSHLPTDVLDTLPQCPGVYRFYGENDVLLYVGKSTNILQRVASH
FSGDHNSHRGIRMSQSLRRVEWTETAGELGALLLELKQIKTLSPIYNRRQRAAKNLVSIE
LTPNADGYLQARLVREIEPHRLGDYYGLFRSIRDAERALKGIAAKNELCNQLLGLEPEND
GPCFQRSLGRCKGACDGGEDVTRYNLRTQIAFHTLRLKTWPWKGPIGVIERNPKRERTDI
LVIYNWMHVATLHDEDELSDISLRGQSVTFDVDSYKLVVKALHQRDGHERRIVELPALST
PDVLMPEGSA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcatgaatgacctgctccctttcctcgattcctgcaccttggcgtttctcgat
ctggaaaccacgggcggcaatgcagcccatgaccggattaccgaagtgggtatccgcttc
tggcgtgacggggaggtcgtcgacgaatggcagacgctgctcaatccggaaacgcgcata
tcgccctttatcgagcaattgaccggtatcagcaatcagatggtggcggacgcgccgctg
ttcgaggatatcgccgataccctgagggcgaagctcaagggctgcgtgttcgtcgctcac
aatgcccgctttgactatggcttcgtgaagtcggagttccgtcgcctggggcaggcgttc
tcggcgcgggtgctgtgtacggtcaagctttcgcgcaagctttaccccgcctatcggcgt
cacaacatggacgccttgatcgcccggcatgggctgccggtggtccaaaggcatcgggcc
atgggcgatgtcgaggccatgcacgccttcttcgagacggctatgggcgaccatggcgcc
ggcatggtcgaatacgctgcccgtgaactgctgaaacggcccagcgtgccgtcccatctg
cccacggatgtactcgacaccctgccacagtgccccggcgtctaccgcttttatggcgaa
aacgacgtgctgctctatgtgggcaagagtaccaacatcctccagcgggtcgcctcccac
ttttcgggggatcacaattcccatcgtggcatccgtatgtcccagagtctccgacgggta
gagtggacggaaaccgcgggcgaactgggtgcgctgctattggagctgaagcagatcaag
acgctcagcccgatctacaaccgccgtcaaagggccgccaagaacctggtgagtatcgaa
ctgacgccgaacgcagacggctacctgcaggcccgcctggtgcgtgaaatcgagccccat
cgactgggcgattactacggcctgttccgcagcatccgcgatgccgaacgagcgctgaag
ggtatcgctgccaagaacgaactgtgtaaccagttgcttggtctcgagccggaaaacgat
gggccttgcttccagcgcagtttgggacgctgcaagggcgcgtgcgatggcggcgaggat
gtgactcgctacaacctgcgtacccagatcgccttccacaccctgcgtctgaaaacctgg
ccctggaaggggcctatcggcgtgatcgaacgcaaccccaaacgtgagcggacggatatc
ctggtgatctacaactggatgcatgtcgccaccctccacgatgaagatgagcttagcgac
atctcactgcgcgggcagagtgtcaccttcgacgtcgattcctataaactggtggtcaag
gcgctgcatcagcgggacggccatgagcgccgtatcgtcgagctgccagcgctaagcacg
ccggacgtgttgatgcccgaaggcagtgcgtag
DBGET
integrated database retrieval system
