Marinobacter nanhaiticus: RE428_40180
Help
Entry
RE428_40180 CDS
T10288
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mnk Marinobacter nanhaiticus
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mnk03016
]
RE428_40180 (truB)
Enzymes [BR:
mnk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RE428_40180 (truB)
Transfer RNA biogenesis [BR:
mnk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RE428_40180 (truB)
Prokaryotic type
RE428_40180 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BES73000
LinkDB
All DBs
Position
complement(4433021..4433929)
Genome browser
AA seq
302 aa
AA seq
DB search
MSRRRRGRDVSGILIIDKPQGVTSNGVLQQVKRLYGAAKAGHTGSLDPLATGVLPLCFGE
ATKFSQLMLDSDKSYVAEGKLGVVTDSGDSDGQIVAERAVPADLARGRLEAVLAQFRGDI
EQVPSMYSALKHKGRPLYEYAREGVEIERPARPVTIHALELIGFEADRFRIAVTCSKGTY
IRSLVEDIGEALGCGAHVTALRRTRAAGFGLDRARGVAELEAMRERGESLDPLLVPVETA
LAEFPKLMLEEGQIVSILNGQPVKIAGHPPGWVRLYGGERFLGLGEQLPDGQVAPRRLVK
QG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcgccggcgccggggtcgtgatgttagcggcatcctgatcatcgacaagccccaa
ggcgtaacatcgaatggggtcctgcagcaggtcaaacgcctctatggcgcggccaaggcc
ggtcataccggtagtctcgatcccctcgcaaccggggttctgcccctgtgcttcggcgag
gccaccaagttttcccagttgatgctcgatagcgacaagtcctatgtggccgaaggcaag
cttggtgtcgttaccgatagcggcgacagtgatggccagattgtggccgagcgagctgta
ccggcggatctggccagaggcaggcttgaggccgtgctcgcgcaatttcgcggcgatatc
gagcaagtgccgtcgatgtactcggcgctcaagcacaaggggcggccgttgtatgagtat
gcccgcgaaggcgttgaaatcgagcgccctgcgcgtccggtcaccatccacgcgctggag
cttataggttttgaggcggaccgtttccgaatcgctgtgacctgcagcaaagggacgtat
atccggtcccttgtcgaggatatcggcgaggcgttgggttgcggggcgcacgtgacggcg
ctgcgccgtacccgagcagccggtttcggtctggaccgggcacgcggcgtggctgaactc
gaggcaatgcgggagcgtggcgagtcactagacccgctgctggtcccggtggagaccgcg
cttgcggaatttccgaaattaatgctcgaggaagggcagattgtatcgatattgaacgga
caacccgttaaaatagcgggtcatccaccaggatgggttcgtctctatggaggcgagcgc
tttctcggactgggtgagcagttacccgacggccaggtcgcaccccggcgtctggtaaag
cagggctga
DBGET
integrated database retrieval system
