KEGG   Marinobacter nanhaiticus: RE428_40540
Entry
RE428_40540       CDS       T10288                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
mnk  Marinobacter nanhaiticus
Brite
KEGG Orthology (KO) [BR:mnk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mnk02048]
    RE428_40540
Enzymes [BR:mnk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     RE428_40540
Prokaryotic defense system [BR:mnk02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   RE428_40540
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like T1RH-like_C 7TMR-HDED FlxA DUF2383 DUF3083
Other DBs
NCBI-ProteinID: BES73036
LinkDB
Position
4477238..4480570
AA seq 1110 aa
MPGPEFTEVELPFIQQLEQEGWDYIEGSLDSPSVTHRETFAQVIMEPLLRDRLLAINTRN
GKPWLDERRLDQAVSAITRLPASKVMEANKLTTGLLHGGITVEGLSGWDGGRGQTIHFID
WTNPENNTFTVVNQFKVKCPPGHDGWKGHVIPDLVLFVNGIPLVVIECKSRTVPEGLSDA
VDQLRRYYDQRHLDLEVEQHEGAPALFSTNQFMVASNFDDARVGTIGAGFNHYLNWKTVA
PRSEADVTDALGVQSLSSQQRLIAGMLPPANLLDIVRHFTLFMTMGGQTIKLVCRYQQYR
AVTRAVQRLKTGKTRAEDGEHDRRGGIIGHTQGSGKSLTMVFLVLKLRTDPELRRFKVVV
ITDRKDLQDQLSDTAELTGETVKVASNTGKLKLLLGQPGPGLIFGTIQKYREHESASPAY
PSPKPPRGLETDRRDAADNPERKPAKPIPSRPLGLINESPDILVMIDEAHRTQAGDLHAN
LLQAVPNAARIGFTGTPIIMGKKKQTSEIFGDYIDRYTIKEAENDGATVPILYEGRTAEG
AVKEGANLDDLFEDLFKERTKDELELIKKKYATKGQIFEAPRLIEEKAADILRHYVTNIL
PNGFKAQLVAYSRRAAIRYLEALKQSRTKLLEEAMALPPEDKNIGETELISRPPRIKAAI
KAWQYRELLQQLEFAVVFSSSNNDDSGWAQWSDRSAIEQNIKRFKKPLFHKDPEKADPLS
FLIVKSMLLTGFDAPIAGVMYLDRPIREAELLQAVARVNRTGFGKRCGIVVDYYGVANHL
KEALAAYSDEDIEGALQSLKDEIPLLRDRHLRVVDVLRKQGIDSLTDTEEAVTALGDERL
RAEFIVKLKEFSRTLDDVLPRPEALEFVNDAKQLAHIHALARNRYKDSPELGKDVGSKVR
KLIDDYMISLGINPKIPPVQLTDTDFDQHINRQVSDRAKASEMEHAVRSHVRKHLDEDPV
KYTKLSERLKDILEQMDGLWQEQVDALSALIRQLQEDETTDDETPSALPPNHLPFLRVMA
EIKQDSDEALTSDEQENLEQATVSTVQIITEELRIPDFWKPSHLPDQERLRGRLFEELFE
LDLFPVNQLDALLDKLIDLAKANHSKLVNP
NT seq 3333 nt   +upstreamnt  +downstreamnt
atgcctggcccggaattcaccgaagttgagctcccctttattcaacaactggagcaagag
ggctgggattacatcgagggctccctggattccccatccgtcacccatcgtgaaaccttc
gcccaggtcatcatggagccgttgcttcgtgaccggctactggcgatcaacacccgaaat
ggcaaaccctggctagacgaaaggcggctcgatcaggccgtctccgccattacccgactt
cccgccagcaaagtaatggaagccaacaaactgacaaccggactgctccatggcggcatc
acagtagagggattgtcaggttgggatggtggcagggggcaaaccatccactttatcgac
tggaccaaccctgagaacaataccttcaccgtggtgaatcagttcaaggtaaaatgccca
ccgggccatgacggctggaaaggtcacgtcattcccgatcttgttctgttcgtgaacggc
attcctctggtggtcatcgagtgcaaaagccgcactgttcctgagggcctttcggacgcc
gtggatcagctacgccgatactacgatcagcgccatctggatcttgaggttgagcaacat
gaaggtgcccctgccctgttctctactaaccagtttatggtggcctccaacttcgatgat
gcccgggtgggaaccattggtgccgggtttaaccattacctgaactggaaaaccgtggcg
ccacgatccgaagcggacgttacagacgctctaggagtccaatcgctttcgtcacagcag
cgattgattgcgggcatgctgcctcccgccaacctgttggatattgtccgccacttcaca
ctctttatgaccatgggcggccagaccatcaagctggtgtgccggtatcagcagtatcgg
gcggtcacacgagccgttcagcgcctgaaaaccggtaaaacccgagccgaagacggcgaa
cacgaccgccgtggcggaatcatcgggcacacccagggcagcggcaaaagcctgaccatg
gtattcctggtgctcaagctcagaaccgatccggagcttcgccgtttcaaagtcgtcgtg
ataacagatcggaaggatctgcaggatcagctgtcggatactgcggagctcacgggcgag
accgtcaaagtcgccagcaacacgggcaaactcaagttgttgctgggacagccaggaccc
gggcttatttttgggaccatccagaaataccgggaacatgaatcggcctctcctgcttat
ccttcacccaagcccccacgcggcctggaaactgatcgacgggatgctgcagacaacccc
gagcgcaaaccggcgaaacccattccctctcgcccccttggtctgatcaatgaaagcccg
gacattctggtgatgatcgacgaagctcaccgcacccaggccggggacctgcatgcgaac
cttttgcaggcggtacctaatgctgcccgaatcgggtttacgggcaccccaattatcatg
ggcaagaaaaaacagaccagtgagatcttcggcgactacatcgaccgctacaccataaag
gaagcggagaacgatggtgccactgtaccaattctttacgaggggcgaacggcagagggt
gcagtgaaagagggtgccaacctggatgacctattcgaggacctgttcaaggaacgcacc
aaggacgaactggaactcataaaaaagaaatacgccaccaagggccagatttttgaggca
ccccgcctgatcgaggaaaaggcagcggacatcctgcgtcactacgtcaccaacatcctg
cccaatggtttcaaagcccagctggtagcctatagccgaagagccgccatacgctacctt
gaagcgcttaaacagtcccggacgaagctgcttgaggaggctatggcgctacctccggaa
gacaagaacatcggtgagaccgaactgatttcccggccacccagaatcaaagcagccatc
aaggcttggcaatatcgcgagttactacagcaattggagtttgctgtggtattcagcagc
agtaacaacgatgacagcggctgggcacagtggagtgaccggtccgcaattgagcagaac
atcaaacgattcaaaaagcccctttttcacaaagatccggagaaagccgacccactcagc
ttcctgatcgtgaagtccatgctgctaactggttttgacgcacccattgcaggtgtgatg
tatctcgaccgcccgattcgtgaagcagaattgctgcaagccgttgcccgagtaaaccgc
acagggttcgggaaacgctgcgggattgtggtggattactatggagttgcaaaccacctc
aaagaagctctggctgcctatagcgatgaagatattgagggcgcactccagagcctgaaa
gacgaaattccgctgctacgggatcgccaccttcgggttgtggatgtgctgagaaaacag
ggcatcgatagcctaacggatacggaggaagccgttacagcgctaggtgacgaacggctg
cgagcagagttcatcgttaagctaaaagagtttagccgaacactggatgacgtcctgccc
cgcccggaagcactggaattcgtgaatgacgccaagcaactggcccatattcacgcactg
gctcgaaaccgatacaaagacagcccggaattgggcaaagacgttggcagtaaggtccgc
aaactgattgacgactacatgatctcgctgggcatcaacccgaagataccgccggtgcaa
ttgactgacactgactttgaccagcatataaatcggcaggtcagtgaccgggccaaggcg
tccgagatggagcacgcagttcgctcccatgtcagaaagcacctggacgaagacccagtg
aaatacaccaagctcagtgaacgcctgaaggacatcctggagcagatggacgggctctgg
caggagcaggtagatgcactatcagccttgatcaggcaattgcaggaagatgaaacaacg
gatgacgagacaccctcagcccttccaccgaaccacctccccttcctgagagtgatggcc
gagatcaagcaggatagcgacgaagcacttacctcggatgagcaggagaacctggagcaa
gccaccgtatccacggttcagataatcacagaagaactgcgcatcccggacttctggaag
ccttcccacctgccagaccaggagcgcctacgaggccgactgtttgaagagttgttcgag
ctggaccttttcccagtcaatcaactggatgcactgctggacaaattgattgatctggcc
aaagcgaaccacagcaagctggtgaacccgtga

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