Marinobacter nanhaiticus: RE428_46090
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Entry
RE428_46090 CDS
T10288
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mnk Marinobacter nanhaiticus
Pathway
mnk03420
Nucleotide excision repair
mnk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RE428_46090 (uvrD)
03430 Mismatch repair
RE428_46090 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnk03400
]
RE428_46090 (uvrD)
Enzymes [BR:
mnk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RE428_46090 (uvrD)
DNA repair and recombination proteins [BR:
mnk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RE428_46090 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
RE428_46090 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
BES73591
LinkDB
All DBs
Position
complement(5060122..5062287)
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSPIIDSLNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRMAWLMQVDQVPATGLLAV
TFTNKAAREMRHRIGELMNLHGHGMWFGTFHSIAHRLLRAHYQDAGLPENFQVLDSDDQV
RLIKRVMREQQIDESRWPPKQVQWFINGQKDEGLRADHIQENPDDHFTSVMLKIYRQYEK
QCQLSGLVDFGELLLRSHELWLHRPELLAHYQRRFQHILVDEFQDTNTIQYAWLQVLAGN
RVPLTIVGDDDQSIYGWRGAKIENIQKFQQDFPNARMVRLEQNYRSTQTILKAANAVIAN
NQGRLGKELWTDGVEGEPISLYAAFNEQDEANYIADTISAWVNDGNLRSEAAILYRSNAQ
SRVLEESLLRQGIPYRVYGGLRFYDRQEIRNALGYLRLVHYRHDDAAFERVVNTPPRGIG
AKSLADLREMATGQGISLWQATERLLEAGAMKGRAKTGLQQFVSIIEGLAADQDELDLKQ
LTQRAIQDSGLRDHHANEKGEKAQARVENLEELVSAMADFEVEDGIDPLSEFIAQAALDA
GESQADDNQDSVQLMTLHSAKGLEFPLVFLAGVEEGLFPHSMSLEEPGRMEEERRLAYVG
ITRAMKRLILTYAESRRLYGQEKFHALSRFVREIPGDCIQEVRLRNTVTRPAMVQRPNEG
LFDSSPMEQAGLQLGQRVRHPKFGEGVVMNCEGSGHHTRVQVNFDDGAKWLVLAYAPLEQ
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctccccgattatcgattccctgaacgacgcccagcgtgaggcggtgacggcg
cagaacgatcacctgctggtgctggccggtgccggttcgggcaagacccgcgtgctggtg
caccgcatggcgtggctcatgcaggtggaccaggtgccggccactggtctccttgccgtc
acgtttaccaacaaggccgcgcgggagatgcgccaccgtatcggggagttgatgaacctg
catggccatggcatgtggttcggtaccttccacagcattgcccatcgcctcttgcgtgct
cactaccaggacgccgggctgccggagaacttccaggtgctggatagcgacgaccaggtg
cggttgatcaagcgggtcatgcgcgaacagcagatcgatgagagccgctggccgccgaaa
caggtgcagtggttcatcaatgggcagaaggatgaggggctgcgggcggaccatatccag
gagaaccctgacgatcacttcacctcggtgatgctgaagatctatcgccagtacgaaaag
cagtgtcagctttccggcctggtggattttggcgagctgctgttgcgctcccatgagctc
tggctacaccggcccgagctgctggcccattaccagcgtcgcttccagcacatcctggtg
gatgagttccaggacaccaacaccatccagtacgcctggctgcaggtgctggcgggtaac
cgggtgccgttgaccatcgtcggggacgacgaccagtccatctacggttggcgcggcgcc
aagatcgagaacatccagaaattccagcaggattttcccaatgcccggatggtgcggctg
gagcagaattatcgttccacccagaccatcctcaaggcggctaatgcggttatcgccaac
aaccagggtcgcctgggcaaggaactctggaccgatggtgtcgagggcgagccgatcagt
ctctacgccgccttcaacgagcaggacgaagccaactacatcgccgataccatcagtgcc
tgggtcaatgacggcaacctgcgcagcgaagcagccattctttatcgctccaatgcgcaa
tcccgggtcttggaagaatccttgttgcgccagggtattccatatcgggtctatggcggg
ctgcgtttctacgaccgtcaggaaatccgcaacgccctggggtatctacggctggtgcac
taccggcacgacgatgcagccttcgaacgcgtggttaatacgccgccccggggtatcggc
gccaagagcctggcggatctgcgggaaatggccaccgggcaggggatttccctctggcag
gcgaccgaacgactgcttgaagccggggccatgaaaggtcgcgccaagaccggtttgcag
caattcgtttccattatcgaagggttggctgccgaccaggacgaactggatctcaagcaa
ctgactcaacgcgctatccaggacagcggcctgcgcgaccaccacgccaatgaaaaaggc
gagaaggcgcaggcccgggtggaaaacctggaagagcttgtcagcgccatggcggatttc
gaggtggaagacggtatagatccgctatcggaatttatcgcccaggcggcgctggacgcg
ggtgaatcccaggcggacgacaaccaggacagcgtgcagctgatgacgctgcactccgcc
aagggcctggagttcccgctggttttcctggccggtgtagaggaagggctgttcccacac
agtatgtccctggaggaaccaggacgcatggaggaggagcggcgcctggcctatgtcggt
atcacccgggcgatgaagcggttgatactgacctacgccgagtcccgtcggctgtatggt
caggagaagttccatgccttatcacgcttcgtgcgtgagattcctggcgactgcatccag
gaagtgcggctgcgcaatacggtgacgcgaccggcgatggttcagcggccgaatgagggg
ctgttcgattcctccccgatggaacaggccgggctgcaactgggccagcgggtacgccat
cccaagttcggcgagggcgtggtaatgaattgcgagggttccggccaccatacccgggtc
caggtcaacttcgacgacggggcaaaatggctggttctggcctatgctcctctggagcaa
ctttga
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