KEGG   Marinobacter nanhaiticus: RE428_46920
Entry
RE428_46920       CDS       T10288                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
mnk  Marinobacter nanhaiticus
Brite
KEGG Orthology (KO) [BR:mnk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mnk02044]
    RE428_46920 (tssC)
Secretion system [BR:mnk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RE428_46920 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: BES73674
LinkDB
Position
complement(5161105..5162586)
AA seq 493 aa
MSDTAVQQSAATESVEEGSLLDQVMANSRMKPADEGYDVARRGVATFIANLLNSDEKGQP
VNKALVDQMVVELDRKISAQMDEILHAPKLQELESSWRGLKLMVDRTDFRENIKVDILHA
TKTELLEDFEFAPDVTQTGFYKHIYATGYGQFGGEPVGAVVGNYAFTPSTPDMKLLQYVS
SVGAMAHAPFLSSVAPTFFGVDSFQELPAIKELSAVFEGPRYAKWRSLRESEDARYLGLT
APRFLLRTPYDPVENPVRSFNYREDVSGDHDHYLWGNTAYLLATRLTDSFAKYRWCPNII
GPQSGGAVEDLPVHLFESFGQLEAKIPTEVLVTDRREYEMADEGFIALTMRKGSDNAAFF
SANSVQKPKVFPNTKEGKEAETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDL
ERELNGWIKQYVADQENPPAEVRSRRPLRAAQVTVSEVEGDPGWYQVSLAVRPHFKYMGA
NFELSLVGRLDKE
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgtctgatacagccgtgcagcaatccgctgccaccgaatccgtagaagaaggctctctg
ctcgatcaggtcatggccaacagccggatgaagccggcagatgaaggctatgacgtggcc
cgtcgcggtgttgcgacatttattgccaacctgctgaacagcgatgaaaagggtcagccg
gtcaacaaggccctggtcgaccagatggtggtcgagctggaccgcaagatcagcgcgcag
atggatgaaatcctgcacgcgcccaagctgcaggagctggaatcctcctggcgcggcctg
aaactgatggtcgaccgcaccgatttccgcgagaacatcaaggtggatatcctgcacgcc
accaagaccgagctgctcgaggacttcgagttcgcaccggacgtcacccagaccggcttc
tacaagcatatctatgcgaccggttacggtcagttcggcggtgagccggtcggcgccgtc
gtcgggaactacgcgtttacgccgtccaccccggacatgaagttgctgcagtatgtctcg
tccgttggcgccatggcccacgcaccgttcctgtcctctgtagcgccgaccttctttggt
gtcgacagcttccaggaactgccggcgatcaaggaattgagtgccgtgttcgaaggtccg
cgttacgccaagtggcgctccctgcgggaatccgaagacgcccgctacctgggtctgact
gcaccccgattcctgctgcgtacgccgtatgatccggtcgagaacccggtgcgcagcttc
aactaccgtgaagatgtcagcggcgaccacgatcactacctgtggggcaacaccgcctac
ctgctggccacccgcctgaccgacagcttcgccaagtaccgctggtgcccgaacatcatc
ggtccccagagcggcggcgcggtggaagacctgccggttcacctgttcgaatccttcggt
cagctggaagccaagatccccaccgaagtgctggtcaccgaccgtcgtgagtacgaaatg
gcggatgagggcttcatcgccctgaccatgcgcaagggcagcgacaacgctgcattcttc
tccgccaactcggtgcagaagcccaaggtcttcccgaataccaaggaaggcaaggaagcg
gaaaccaactacaagctgggtacgcaactgccgtacatgttcatcattaaccgcctggcg
cactacatcaaagtgctgcagcgcgagcagatcggctcttggaaggagcgccaggatctg
gagcgtgaactgaacggctggatcaagcagtacgtggccgaccaggaaaacccgccggca
gaagtacgcagccgccgtccgctgcgggccgcccaggtcacggtgtccgaagtggaaggc
gatccgggctggtaccaggtatccctggccgtacgtccgcatttcaaatacatgggtgcc
aacttcgagctttcgctggtcggacgtctcgacaaggagtaa

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