Mogibacterium neglectum: QU661_01675
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Entry
QU661_01675 CDS
T09253
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mnl
Mogibacterium neglectum
Pathway
mnl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mnl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QU661_01675 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnl03021
]
QU661_01675 (rpoC)
03400 DNA repair and recombination proteins [BR:
mnl03400
]
QU661_01675 (rpoC)
Enzymes [BR:
mnl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QU661_01675 (rpoC)
Transcription machinery [BR:
mnl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QU661_01675 (rpoC)
DNA repair and recombination proteins [BR:
mnl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QU661_01675 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
WLD76575
LinkDB
All DBs
Position
364340..367972
Genome browser
AA seq
1210 aa
AA seq
DB search
MAKNDNNQDLRNFESLQIKLASTDKMLEWSHGEVTKPETINYRTLKPERDGLFCEKIFGP
TKDWVCSCGKYNKIRFKGIVCPYCGVEVTKSKVRRERMGHIQLVSPVSHIWYFKGIPSRI
GLVLDITPKQLERVLYFAAYIVTDPGETPFEYKQIIEENQYNEAREIYGKNFEASMGAEA
IKKLLENINVDEETELLREQLKKATGQKRIRLVKRLEVIEALKQSENRPEWMILEVVPVI
PPDLRPMVQLEGGRFATSDLNDLYRRVINRNNRLKKLLELGAPDIIVRNEKRMLQESVDS
LIDNGRRGRAVTGAAGRQLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKFYQ
CGLPKTMALELFKPFIMKELVEQELAHNIKSAKTMVEKMKSEVWDVLDYVIKDHPVLLNR
APTLHRLGIQAFEPVLVEGKAIKLHPLVCTAFNADFDGDQMAVHVPLSVEAQAEARFLML
SVNNILAPKDGSPITIPTQDMILGSYYLTHEGTEDRNLENEKGDGKCFADIDEMLMAYRN
HAVGIHAKVKVRRQAFPGDPGKLVESTVGRFIFNQGLPQDMGFVNRDEDPYSLEVDFLCD
KKKLGVIIDKCFKKHGNTRTVLMLDYVKSIGYHYSTKAAVTISVSDMEVPEEKAEIVAAA
DKQVDKFEVAYRRGLMTDRERYDRIIKTWKDATDQVADALMDSLGPLNNLFIMASSGARG
NKSQISQVGGMRGLMANATGHTVEIPIKANFREGLSILEYFISSNGARKGLADTALRTAD
SGYLTRRLVDISHSVIVTEDDCGAEEGVEIKAFTDGKEVIEPLSQRIAGRFVTESVVHPE
TDEVLAAEGDFIEDDVAEAIEAAGVEVVKIRSVMTCQAEHGVCAKCYGRNLATGTAVLPG
ETVGIIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRVEELFEARKPKGLAEICEGDG
EVVSIEPTDDNRTSVVVKEEGGNREYIISYGSRLNVKVGDTVYAGGQITKGPLDPHDVMR
ILGVQGVYEYLLREVQRVYRQQGVDINDKHVEVITSQMLSKYKIEKAGDTNLLPGSMYSI
NEINKANAEIDSEEGEPATYERQLLGITKAALATSSFLSAASFQETTRVLTDAAVKGKTD
HLDGLKENVMIGKLIPAGTGMKRYGAVEVDYGDNEPLMNSSYDDENMVLKMPSANVQPQA
TAPLYDGIEE
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaacgataataatcaagatcttagaaattttgaatccctacagatcaagttg
gcttcaacagataagatgcttgaatggtctcatggtgaggtaacaaagccggagactatc
aactacagaactctcaagcctgaaagagacggactcttctgcgagaagattttcggacct
accaaggattgggtgtgctcctgtggaaaatacaacaaaattcgctttaagggcatcgtt
tgcccttactgcggagttgaggtaacgaagtccaaggttagaagggagagaatgggacac
atacagcttgttagtcctgtatctcacatatggtacttcaagggaatcccttcaagaata
ggactagtgctcgacatcactcctaagcagctagagagggtgctatattttgctgcatat
atagtaactgatccaggagaaactccattcgagtacaagcagattattgaagaaaatcaa
tataatgaagctcgcgaaatttatggaaagaacttcgaagcctcgatgggggcagaggct
atcaagaagcttctagagaacatcaatgttgacgaggaaacagaacttctcagagagcag
ctcaagaaggcaactgggcagaagagaatccgtctagttaagagactcgaagttatcgag
gctctaaagcagtctgaaaatagacctgaatggatgattctcgaggtagtccctgtaatt
ccgcctgaccttagacctatggttcagcttgagggcggtagattcgctacatccgatcta
aatgacctatacagaagagttataaacagaaataacaggcttaagaagctactcgagctt
ggagctcctgacatcatcgttagaaacgagaagagaatgcttcaggaatcagttgactct
ctaatcgataacggtagaagaggtagagcggttacaggtgctgctggtagacagcttaag
tcgctatctgacatgcttaagggtaagcagggtcgtttccgtcagaacttgctcggtaag
cgtgtcgactactccggacgttctgtaatcgtagtaggacctgaactgaaattctatcag
tgcggacttcctaagactatggcgcttgaactgttcaagccttttataatgaaggagctt
gtagagcaggaactagcgcataacattaagagtgcaaagacaatggttgagaagatgaag
tccgaggtatgggacgttctcgactatgtaatcaaggatcatccggtacttcttaaccgt
gctccgacactgcacaggcttggaattcaggcatttgaaccggttctagtagagggtaag
gctattaaacttcatccacttgtttgtacagcgttcaacgccgacttcgacggagaccag
atggctgtacacgtacctctatccgtagaggcgcaggcagaggctagattcctcatgctg
tcggttaacaatatccttgctcctaaggatggttcacctatcacaatccctactcaggac
atgattctcggaagctactacctcactcatgagggtacagaagatcgtaaccttgagaat
gagaagggtgacggcaagtgctttgcagatattgatgagatgctcatggcttatagaaac
catgctgtagggattcacgcaaaggttaaggttagaagacaggcttttcctggagatcca
ggcaagctagttgagtctacagtaggcagattcatcttcaaccaggggcttcctcaagat
atgggcttcgtaaatagagatgaagacccatattcgctagaggtagatttcctatgtgac
aagaaaaaactcggtgttatcatcgacaagtgcttcaagaagcacggtaatacaagaaca
gttctcatgctcgactatgtaaagagtataggttaccactactcaactaaggcggctgtt
acaatcagtgtatctgacatggaggttcctgaggagaaggctgaaatcgttgcagcggct
gataagcaggtagataagtttgaggttgcatacagacgtggtctgatgacggatagagaa
cgttacgacagaatcatcaagacttggaaggatgcaactgatcaggttgctgatgccctg
atggattccctgggacctctcaacaatctgttcattatggcaagctctggagccagaggt
aacaagtctcagatcagccaggttggcggtatgagaggccttatggctaatgcgacagga
cacacagtagagattcctattaaggctaacttccgtgagggtctatctatcctggagtac
ttcatttcatccaatggtgctcgtaagggtctcgctgatactgcgcttcgtacggctgac
tccggatacctaacaagaagacttgtagatatttcgcatagcgtaatcgtaactgaggat
gattgtggggcagaagaaggcgttgagatcaaggcatttacagatggtaaggaagtaatt
gagccactatcacagagaatcgcaggtagatttgttactgagtccgttgtgcatccagag
actgacgaagttctcgctgcggaaggcgacttcatcgaggatgatgttgcagaagcaatc
gaggcagctggggttgaagtggttaagattagatctgtcatgacttgtcaagcagagcat
ggagtttgcgctaagtgttacggcagaaacctcgctacaggaactgcagttctaccaggt
gagactgttggtattattgccgctcagtctatcggtgagccgggtacgcagttgactatg
agaacattccacactggtggtgtagcaggaagcgatatcacacagggtctcccaagagtt
gaggagctgttcgaagctagaaagcctaagggtctagctgaaatctgcgagggggatgga
gaggttgtatctattgagccaactgacgacaacagaactagcgttgttgttaaggaggaa
ggtggcaaccgcgagtacatcatctcttacggttcgcgactcaatgtaaaggttggagac
actgtatacgcaggtggccagattacaaaagggcctctcgatccacacgatgtaatgaga
atcctcggcgttcagggagtatacgaatacttgctgcgcgaggttcagagagtgtacaga
cagcagggtgtagacatcaacgacaagcacgttgaggtaatcacatctcagatgctatct
aagtacaagattgaaaaggctggagatacaaacctgcttcctggaagtatgtatagcatc
aacgagattaacaaggcaaatgcggaaattgattcagaagagggcgagccagctacatac
gagcgtcagctacttggtatcaccaaggctgctcttgctacaagttcattcctatctgct
gcgtcatttcaggagacaactcgcgtattgacagacgctgcagttaagggtaagacagac
catctggacggactcaaggagaacgtgatgattggtaagctgattccagccggaactggc
atgaaacgctacggagcagttgaggttgattacggtgacaatgaacctctaatgaactcg
agctacgatgacgagaacatggttcttaagatgccatcggctaatgtgcagccacaggca
acagcaccgctatacgatgggattgaggaataa
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integrated database retrieval system
