Mycobacterium novum: MNVM_22670
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Entry
MNVM_22670 CDS
T06926
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mnm
Mycobacterium novum
Brite
KEGG Orthology (KO) [BR:
mnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnm03032
]
MNVM_22670 (topA)
03400 DNA repair and recombination proteins [BR:
mnm03400
]
MNVM_22670 (topA)
Enzymes [BR:
mnm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MNVM_22670 (topA)
DNA replication proteins [BR:
mnm03032
]
Prokaryotic type
DNA Topoisomerases
MNVM_22670 (topA)
DNA repair and recombination proteins [BR:
mnm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MNVM_22670 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
DNA_photolyase
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BBX13186
UniProt:
A0A7I7JMS1
LinkDB
All DBs
Position
2447036..2449822
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AA seq
928 aa
AA seq
DB search
MADSKTVSARNGDKTPVRRLVIVESPTKARKIAGYLGSGYVVESSRGHIRDLPRNAGDVP
AKYKTEPWARLGVNVDAEFEPLYIVSPDKKSTVTELKGLLKDVDELYLATDGDREGEAIA
WHLLETLKPRVPVKRMVFHEITEPAIRNAAENPRDLDIDLVDAQETRRVLDRLYGYEVSP
VLWKKVAPKLSAGRVQSVATRIIVQRERERMAFRSASYWDVVAQLDASVSDPGAAPPTFT
ARLVAVDELRVASGRDFDSLGTLRKPDEVRVLDEAAATALAAGLAGASLSVTSVEEKPYT
RRPYAPFMTSTLQQEAGRKLRFSAERTMSIAQRLYENGYITYMRTDSTTLSASAIDAART
QARQLYGEEYVSPTPRQYTRKVKNAQEAHEAIRPAGETFATPDAVRNELGSDEFRLYELI
WQRTVASQMADARGTTLSLRIGGRSGSQQVTFAASGRTITFAGFLKAYVETVDELAGGEA
DDAERRLPQLTQGQRVDAAEATPDGHSTNPPARYTEASLVKSLEELGIGRPSTYSSIIKT
IQDRGYVYKKGSALVPTWVAFAVIGLLEQHFGRLVDYDFTAAMEDELDGIAAGRQRRTDW
LHNFYFGGDYGVEGSIARAGGLKKLVGVNLEGIDAREINSIKLFDDEQGRPVYVRVGKNG
PYLERMVAGDDGEPTPQRANLDDSLPPDELTLALAEERFATPQEGRPLGIDPETGHEIVA
KDGRYGPYVTEILPPPDDESGTTAKKGKKPTGPKPRTGSLLRSMDLQTVTLEDALKLLSL
PRVVGVDPGSGDEITAQNGRYGPYLKRGTDSRSLSSEEQIFEITLEEALKIYAEPKRRGR
QAAAAPPLRELGADPATGKPMVIKDGRFGPYVTDGETNASLRKGDEVASITDERAAELLA
DRRAKGPVKKKAAKKTTRKAPAKKATKR
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
ttggctgactctaagacggtgagcgcccgcaacggcgataaaacacccgtgcggcgactc
gtcatagtcgagtcgcccaccaaggcgcggaaaatcgccggttacctgggcagtggctac
gtcgtcgagtcctcccgaggtcatatccgggacctgccgcgcaacgccggcgacgtgccg
gcgaagtacaagaccgagccgtgggcgcgcctcggggtgaacgtcgacgccgagttcgag
ccgctctacatcgtcagccccgacaagaagagcaccgtcaccgaactcaagggcctgctc
aaagacgtcgacgagctctatctggccaccgatggtgaccgggagggcgaggcgatcgcc
tggcacctgctggagaccctcaagccgcgcgtgccggtcaagcggatggtgttccacgag
atcaccgaaccggcgatccgcaacgccgccgagaacccccgcgacctggacatcgacctg
gtcgacgcgcaagagacccggcgcgtcctggaccggctctacggctacgaggtcagcccc
gtgctgtggaagaaggtcgcaccgaagctgtcggcgggccgtgtccagtcggtggccacc
cgcatcatcgtgcagcgcgaacgcgagcggatggcgttccgcagtgcctcctactgggat
gtggtggcccagctggacgccagcgtctccgacccgggcgccgccccgcccaccttcacc
gcccgactggtcgccgtcgacgagctgcgggtggccagcggacgcgacttcgactcgctg
ggcacgctgcgcaaacccgacgaggtgcgggtgctcgacgaggcggcggccaccgcgctg
gcggccgggctggcgggcgcgtcgctgtcggtgacctcggtggaggagaagccctacacc
cggcggccctacgcgccgttcatgacctcgacgttgcagcaggaagcgggccgcaagctg
cggttctccgccgaacggacgatgagcatcgcccagcggctctacgagaacggctacatc
acctacatgcgtaccgactcgacgacgctgtcggccagcgccatcgatgccgcgcgcacc
caggcgcgccagctctacggcgaggaatacgtctcgccgacgccgcggcagtacacccgc
aaggtcaagaacgcccaggaggcccacgaggcgatccggccggccggcgagacgttcgcc
acccccgacgcggtgcgcaacgagctgggcagcgacgagttccggctctacgagttgatc
tggcagcgcacggtggcctcgcagatggccgacgcccgcggcaccacgctgagcctgcgt
atcggtggccgctcgggttcgcagcaggtcaccttcgccgccagcgggcgcaccatcacc
ttcgccgggttcctcaaggcctacgtcgagaccgtcgacgagttggccggcggtgaagcc
gacgacgccgagcgccggctgccgcagctgacccagggccagcgggtggatgccgccgag
gccaccccggacgggcactccaccaacccgccggcccgttacaccgaggcctcgctggtc
aagtcgctcgaggagttgggcatcggacggccctcgacctactcgtcgatcatcaagacc
atccaggaccgcggctacgtctacaagaagggcagcgcgctggtcccgacctgggtggcg
ttcgccgtcatcggtctgctcgaacagcacttcggccggctggtcgactacgacttcacc
gcggcgatggaggacgaactcgacggcatcgccgccgggcggcagcgccgcaccgactgg
ctgcacaacttctacttcggcggcgactacggcgtggagggttcgatagcccgggccggg
ggcctcaagaagctggtcggggtcaacctggagggcatcgacgcccgcgagatcaactcg
atcaagttgttcgacgacgagcagggccggccggtgtatgtccgggtcggcaagaacggc
ccgtacctggagcgcatggtcgccggcgacgacggcgagccgacgccgcagcgcgccaat
ctcgacgattcgctgccgcccgatgaactgaccctggcgctggccgaggaacgcttcgcc
actccgcaggagggccggccgctgggcatcgacccggagaccgggcacgagatcgtcgcc
aaggacggccgctacggcccctacgtcaccgagatcctgccgccgccggacgacgagtcg
ggcaccaccgccaagaagggcaagaagccgaccggacccaagccgcgcaccggatcattg
ctgcgcagcatggatctgcagacggtgaccctcgaggacgcactcaagctgctgtcgttg
ccgcgggtggtcggcgtcgacccgggctccggcgacgagatcaccgcccagaacggccgc
tacggcccgtatctgaagcgcggcaccgattctcggtcactgtccagcgaggagcagatc
ttcgagatcaccctcgaagaggcgctcaagatctacgccgagccgaaacgccgtggccgc
caagcggctgccgcgccgccgctgcgtgaactgggcgccgacccggcgaccggcaagccg
atggtgatcaaggacggccgcttcgggccgtacgtcaccgacggcgagaccaacgccagc
ctgcgcaagggcgacgaggtggcgtcgatcaccgacgagcgggccgcggaactgctcgcc
gatcggcgggccaaggggccggtgaaaaaaaaggctgccaagaagaccacccgcaaggca
ccggccaagaaagccaccaagcgctga
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