KEGG   Mycobacterium novum: MNVM_29510
Entry
MNVM_29510        CDS       T06926                                 
Symbol
lhr
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mnm  Mycobacterium novum
Brite
KEGG Orthology (KO) [BR:mnm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mnm03400]
    MNVM_29510 (lhr)
Enzymes [BR:mnm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MNVM_29510 (lhr)
    5.6.2.6  RNA 3'-5' helicase
     MNVM_29510 (lhr)
DNA repair and recombination proteins [BR:mnm03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MNVM_29510 (lhr)
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_3rd_Lhr WHD_4th_Lhr DEAD Helicase_C ResIII AAA_25 GST_C_2 PhoH AbiEi_4 AAA_22 Cas3-like_C_2 DUF6406
Other DBs
NCBI-ProteinID: BBX13870
UniProt: A0A7I7JPV1
LinkDB
Position
complement(3165002..3169477)
AA seq 1491 aa
MSRETPAALARFSALTRDWFTGTFAAPTEAQQQAWSAIADGHHTLVVAPTGSGKTLAAFL
WALDRLAAEPGPKAAGTRVLYVSPLKALAVDVERNLRTPLAGIGRIAAHPDYAGLPAPAI
TVGVRSGDTSAARRRELVAHPPDILITTPESLFLMLTSAAREALTGVQTVIVDEVHAVAG
TKRGSHLALSLERLDAMLASPAQRIGLSATVRPAEEVARFLSGQAPTTIVAPPAAKTFEL
TVQVPVPDMASPAEGTIWPQVEERIVDLIEAHRSSIVFANSRRLAERLTARLNEIHAERC
PDDAAPDLARAHHGSVSKETRAAVEEDLKSGRLRAVVATSSLELGIDMGAVDLVIQIEAP
PSVASGLQRIGRAGHQVGEVSAGVLIPKHRTDLIGCAVSVQRMLAGQIETLTVPANPLDI
LAQHTVAAAALEPLDAEAWFDTVRRAAPFATLPRSVFEATLDLLSGKYPSTEFAELRPRL
IYDRDTGTLTGRPGAQRLAVTSGGAIPDRGLFAVYLAGADKPSRVGELDEEMVYESRPGD
VISLGATSWRITEITHDRVLVVPAPGQPGRLPFWHGDGVGRPAELGAALGEFTGELAGLD
RAALDKRCAGLGFDDYAADNLWRLLDDQRTATSTVPTDTTLVVERFRDELGDWRVVLHSP
YGLRVHGPLALAVGRRLHERYGIDEKPTASDDGIVVRLPDTDAGATLDAPGADLFVFDAD
EIEPIVTAEVGGSALFASRFRECAARALLLPRRHPGRRTPLWQQRQRAAQLLDVARRYPA
FPIVLETVRECLQDVYDVPALTELMARIAQRRVRVVQVETATPSPFAASLLFGYVGAFMY
EGDSPLAERRAAALSLDPTLLAQLLGRVELRELLDPDAVAAVAAELQHLTPEKAARDAEG
VADLLRLLGPLTGDEIAARAGGSDVGGWLEHLLAARRVLTVAFAGRAWWVAIEDIGRLRD
GIGVAVPPGVPAGFTEPVTDPLGELLGRFARTHGPFTTGQAAERFGLGARVAADALGRLA
ADGRVVRGEFADFPDSPGEQWCDAQVLRILRRRSLAALRSAIEPVSPAAYARFLPAWQQI
GARGAASGLDGLAGVIEQLAGVPLPASAVEPLVLAARVRDYSPAMLDELLASGEVLWAGA
GAPAGNAPAADGWVTFHTADSAPLTLAPGAPFDFGAAHRQILDTLGGGGAFFFRQLAGDT
SEAELKTALWELIWAGWVTGDTFAPMRTVLAGTRRSTPAHRSKRPPRLSRYSVAHAATRA
ADPAVAGRWSRLPATEPDPGFSTVRAHHTAELLLHRYGVLTRGAVAAEAVPGGFAGLYKV
LTAFEEAGRCQRGYFIESLGAAQFALASTVDRLRGYLDGVDPARPEYHAVALAAADPANP
YGAALSWPAHPGTARPGRKAGALVVLVDGELVWFVERGGRSLLNFATGADAAEVQRAAAG
ALAGLIADRRVDGILVERVDGAAVLEIRDSPTTTALAEAGFSRTPRGLRLR
NT seq 4476 nt   +upstreamnt  +downstreamnt
gtgagccgagaaaccccagccgcgctggcccggttctcggcgctgacccgggactggttc
accggcacgttcgccgcgccgaccgaggcgcagcagcaggcctggtcggcgatcgccgac
ggccaccacaccctggtggtggcgcccaccggatcgggcaagacgctggcggcgttcctg
tgggcgctggaccggctggcggccgagcccggcccgaaagctgcgggcacccgggtgctc
tacgtgtcgccgctcaaggcgctggcagtcgacgtcgaacgcaacctgcgcaccccgctg
gccggcatcggccgcatcgccgcgcaccctgactatgcgggcctgcccgcgccggccatc
acggtcggggtccgctccggcgacacctccgcggcgcggcgccgcgagttggtcgcgcac
ccgcccgacatcctgatcaccaccccggagtcactgttcctgatgctgacgtcggcggcg
cgcgaagcgctgaccggggtgcagacggtgatcgtcgatgaggtgcatgcggtggccggc
accaagcgcggcagccacctggcgttgtccctggagcggctcgatgcgatgttggcctcc
ccggcgcagcggatcgggctcagcgccaccgtgcggcccgccgaagaggtcgcccggttc
ttgtccgggcaggccccgaccacgatcgtggcgccgccggcggccaagacgttcgagctg
acggtgcaggttccggtgccggatatggccagccccgccgagggcaccatctggccgcag
gtggaggaacgcatcgtcgacctgatcgaggcccaccgctcctcgatcgtgttcgccaac
tcgcgccggctggccgagcgactgaccgcgcggctcaacgagatccacgcggaacgctgt
ccagacgacgcggcgccggacttggcgcgagcccaccacgggtcggtgtccaaggagacc
cgcgccgcggtcgaggaggacctgaaaagcgggcggctgcgggcggtggtggcgacctcg
agcctggagctgggcatcgacatgggtgccgtcgacctggtcatccagatcgaggcgccg
ccgtcagtggccagcggcctgcagcgcatcgggcgggcaggtcatcaggtcggggaggtc
tcggcgggggtgctgatccccaagcaccgcaccgatctgatcggctgcgcggtctcggtg
cagcggatgctggcgggccagatcgagacgctgacggtaccggccaatccgctggacatc
ctggcccagcacacggtggccgcggccgcgctggagccgctggacgccgaagcctggttc
gacacggtgcgccgggccgccccgttcgcgacgttgccgcgcagcgtgttcgaggcgacc
ctggacctgctctcgggtaagtacccgtcgaccgagttcgccgagctgcggccgcggctg
atctatgaccgcgacaccggcaccctgaccggccggcccggcgcccagcggctggccgtc
acctccggtggcgccatcccggatcgcggcctgttcgcggtgtacctggccggcgccgac
aagccgtcccgggtcggcgaactcgacgaggagatggtctacgaatcgcggccaggcgac
gtgatctcactgggcgccaccagttggcgcatcaccgagatcacccacgaccgggtgctg
gtggtcccggctcccggccagcccggccggctgccgttctggcacggcgacggcgtcggg
cgaccggccgaactgggcgccgcgctgggcgagttcaccggcgagctggccgggctcgat
cgggccgccctcgacaaacgctgcgcgggtttgggtttcgacgactacgcggccgacaac
ctgtggcggctgctcgacgaccaacgcaccgccacgtcgacggtgcccaccgacaccacg
ctggtggtggagcgcttccgcgacgagctgggcgactggcgggtggtgctgcattccccc
tacgggctgcgggtgcacggcccgctggcgctggcggtgggccggcggttgcacgaacgc
tacggcatcgacgagaagccgaccgcctccgacgacggcatcgtggtgcggctgcccgac
accgatgccggcgcaacgttggacgcacccggtgcggacctgttcgtcttcgacgccgac
gagatcgagcccatcgtcaccgccgaggtgggcggctcggcgctgttcgccagccggttc
cgggaatgcgcggcgcgggcgttgctgttgccccgccggcatccgggccggcgcaccccg
ttgtggcagcagcgccagcgggccgcccaattactcgatgtggcacgccgatacccggcg
ttcccgatcgtgctggagaccgtgcgggagtgcctgcaggacgtctacgacgtcccggcg
ctgacggagttgatggcgcggatcgcgcagcgccgggtgcgggtggtgcaggtcgagacc
gccaccccgtcgccgttcgcggcgtcgttgctgttcggctacgtcggcgccttcatgtac
gaaggcgacagcccgctggccgagcgtcgcgcggcggcactgtcgctggatcccacgctg
ctggcgcagctgctgggccgggtggagttgcgcgagctgctcgaccccgacgccgtcgcc
gccgtcgccgccgagttgcagcacctgaccccggagaaggccgcccgcgacgccgagggc
gtcgcggatctgttgcggctgctgggcccgctcaccggcgacgagatcgccgcgcgggcc
ggcggttcggacgtgggcgggtggctcgagcacctgctggccgcccggcgggtgctgacg
gtggcgttcgccgggcgggcctggtgggtggcgatcgaggacatcggccggctgcgcgac
gggatcggggtggcggtgccgcccggagtgccggccggcttcaccgaaccggtcaccgac
cccctgggtgagctgctgggccgcttcgcccgcacccacggcccgttcaccaccgggcag
gccgccgagcggttcgggctgggcgcccgggtggccgccgacgcgctgggccggctggcc
gccgacggccgggtggtgcgcggcgagttcgccgacttcccggactcgccgggcgaacag
tggtgcgacgcccaggtgctgcggattctgcggcgccggtcgctggcggcgctgcgctcg
gcgatcgagccggtgtccccagcggcctacgcgcgtttcctgccggcctggcagcagatc
ggcgcccgcggcgccgcgtccgggctggacgggctggccggggtgatcgagcagctggcg
ggcgtgccgctgccggcgtcggcggtcgagccgctggtgctggcggcgcgggtgcgtgac
tactcacctgccatgctcgacgagctgctggcctccggggaggtgctgtgggccggtgcg
ggcgccccggccggcaacgcgccggccgccgacggctgggtcaccttccacaccgccgac
tcggcgccgttgacgctggcccccggcgcgccgttcgacttcggtgccgcccaccggcag
atcctggacacgctcggtggcggcggcgcgttcttcttccgccagctcgccggtgacacg
agtgaggccgagctcaaaaccgcactgtgggaactgatctgggccggatgggtcaccggc
gacaccttcgccccgatgcggacggtactggccggcacccggcgctccaccccggcacac
cgcagcaagcgtccgccgcggctgagccggtacagcgtcgcccacgccgccacccgcgcc
gccgacccggcggtggccggtcgctggtcgaggttgccggccaccgagccggatcccggg
ttctccacggtgcgcgcgcaccacaccgccgagttgctgctgcaccgctacggggtgctg
acccgcggcgcggtggccgccgaggcggtgccgggcggattcgccggcctctacaaggta
ttgacggccttcgaggaggccggccgctgtcagcgcggttacttcatcgagtcgctgggc
gccgcccagttcgcgctggcctcgaccgtggaccggctgcgcggctacctcgacggtgtc
gacccggcgcgcccggagtatcacgcggtggcgctggccgccgccgacccggccaacccg
tacggggcggcactgagctggccggcgcaccccggcaccgcgcgtccgggccgcaaggcg
ggagcgctggtggtgctggtcgacggcgaactggtctggttcgtcgaacgtggcggccgg
tccctgctgaacttcgccaccggggccgacgccgccgaggtgcagcgggccgctgccggt
gcgctggccgggctgatcgccgaccgccgcgtcgacgggatcctcgtcgagcgggtggac
ggtgcggcggtgctggagattcgcgattcgccgacgacgacggcgctggccgaggccgga
ttctcccgcaccccgcggggattgcggctgcgctga

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