Mycobacterium novum: MNVM_38710
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Entry
MNVM_38710 CDS
T06926
Symbol
dnaE1
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mnm
Mycobacterium novum
Pathway
mnm03030
DNA replication
mnm03430
Mismatch repair
mnm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mnm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MNVM_38710 (dnaE1)
03430 Mismatch repair
MNVM_38710 (dnaE1)
03440 Homologous recombination
MNVM_38710 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnm03032
]
MNVM_38710 (dnaE1)
03400 DNA repair and recombination proteins [BR:
mnm03400
]
MNVM_38710 (dnaE1)
Enzymes [BR:
mnm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MNVM_38710 (dnaE1)
DNA replication proteins [BR:
mnm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MNVM_38710 (dnaE1)
DNA repair and recombination proteins [BR:
mnm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MNVM_38710 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BBX14790
UniProt:
A0A7I7JSL2
LinkDB
All DBs
Position
4102734..4106273
Genome browser
AA seq
1179 aa
AA seq
DB search
MGSSFVHLHNHTEYSMLDGAAKIAPMLAEAQRLEMPAIGMTDHGNMFGASEFYNAATAAG
IKPIIGVEAYIAPGSRFDTRRVHWGDPGQKSDDVSGSGSYTHLTMVAENATGLRNLFKLS
SLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGQDREALESAAKWREI
FGPQNYFLEVMDHGLAIERRVRDGLLAVGRKLGIPALATNDCHYVTRDASQNHEALLCIQ
TGKTLSDPTRFKFDGDGYYLKSAAEMRALWDDQLPQACDSTLLIAERVQSYADVWAPRDR
MPVFPVPDGHDQGSWLRHEVAAGLQRRFPAGVPAEYTDRAAYEIDVICGKGFPSYFLIVA
DLINYARSINIRVGPGRGSAAGSLVAYALGITNIDPLPHGLLFERFLNPERPSAPDIDID
FDDRRRGEMVRYAAERWGSDRVAQVITFGTIKTKAALKDSARVHYGQPGYAIADRITKAL
PPPIMAKDIPLSGITDPNHERYKEAAEVRTLIDTDPDVRTIYETARGLEGLVRNAGVHAC
AVIMSSEPLIDVIPLWKRPQDGAIITGWDYPSCEEIGLLKMDFLGLRNLTIIGDCLENIK
ANRGIDLDLESVPMDDPATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLAL
YRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQIMFIAQKVA
SYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNK
SHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAIYLADCRRLGITVLPPDVNE
SELNFASVGSDIRYGLGAVRNVGANVVGSLIATRTHKGRFTDFSDYLNKIDIAACNKKVT
ESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAQAMGQFDLFGGGDGESAGADAVFG
IRVPDEEWADKHKLALEREMLGLYVSGHPLNGIAHLLAAQVDTAIPAILEGDIASDTQVR
VGGILASVNRRVNKNGLPWASAQLEDLTGGIEVMFFPQTYSAYGAEVVDDAVVLVSAKVN
IRDDRISLIANELVVPDFSANAADRPLAVSLPTRQCTMDKVSALKQVLTRHPGTAQVQLR
LISGERITVLELDPSLRVTPSSALMGDLKALLGPGCLGG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgggatcttcgtttgtacacctgcacaatcacaccgagtactcgatgctcgatggcgcg
gcgaagatcgccccgatgctggccgaggcgcagcgtctggagatgccggcgatcggaatg
accgaccacggaaacatgttcggcgccagcgagttctacaacgccgccaccgcagccggt
atcaaaccgatcatcggggtggaggcctacatcgctcccggttcccggttcgacacccgc
cgggtccactggggggaccccggccagaagagcgatgacgtctccggcagcggctcctac
acccacctgacgatggtggccgagaacgccaccggcttgcgcaacctgttcaagctgtcc
tcgctggcctccttcgagggccagctcggcaaatggtcgcggatggacgccgagatcatc
gccgagcacgccgaggggatcatcgccaccaccggctgcccctcgggggaggtgcagacc
cggttgcggctgggccaggaccgcgaggcgctggagtcggccgccaaatggcgggagatc
ttcgggccgcagaactacttcctggaggtgatggaccacggcctggccatcgaacgccgg
gttcgcgacgggctgctggccgtcggccgcaagctcggcatcccggcgctggccaccaac
gactgccactacgtcacccgcgacgcatcccagaaccacgaggcgctgctgtgcattcag
accggcaagacgctgtcggatcccacccggttcaagttcgacggggacggctactacctg
aagtcggccgccgagatgcgtgcgctctgggacgaccagctgccgcaggcgtgcgactcg
acgctgctgatcgccgagcgggtgcagtcgtacgccgacgtctgggcgccgcgcgaccgg
atgccggtgttcccggttcccgacggccacgaccagggctcctggcttcgccacgaggtg
gcggccgggctgcaacggcgctttccggccggggtgccggccgaatacaccgatcgggcc
gcctatgagatcgatgtcatctgcggcaagggattcccgtcctacttcctgatcgtcgcg
gacctgatcaactacgcgcgttcgatcaacatccgggttggcccgggccgcggctcggcc
gccggatcgctggtggcctacgcgctgggcatcaccaacatcgacccgctcccgcacggg
ctgctgttcgaacgcttcctcaacccggaacgaccgtcggctcccgacatcgacatcgac
ttcgacgaccgccggcgcggcgagatggtgcgctatgccgccgagcggtggggtagcgac
cgggtcgcccaggtgatcaccttcggcaccatcaaaacgaaagcggcgctgaaggactcg
gcccgtgtccattacggccagcccggttacgcgatcgccgaccggatcaccaaggcgctg
ccgccgccgatcatggccaaggacatcccgttgtcgggcatcaccgaccccaaccacgag
cggtacaaggaggccgccgaggttcgcacgctgatcgacaccgatcccgacgtgcgcacc
atttacgagaccgcgcggggcctcgagggcctggtccgcaacgccggtgtgcacgcctgc
gcggtgatcatgagctccgagccgctcatcgacgtgatcccgttgtggaaacggccgcag
gacggcgccatcatcaccggctgggactacccgtcgtgtgaagagatcggcctgctgaaa
atggactttctgggcctgcgcaacctgacgatcatcggggactgcctggagaacatcaag
gccaatcggggcatcgatctggatctcgaatcggtgccgatggacgacccggccacctat
gagctgctgggccgcggcgacaccctgggggtgttccagctcgacggcggcccgatgcgt
gacctgttgcgccgcatgcagcccaccgagttcaacgacatcgtcgcggtgctggcgctg
taccggcccggcccgatgggcatgaacgcccacaacgattacgccgaccgcaagaacaac
cgccaggcgatcaaacccatccaccccgagctcgaagagccgctgcgcgagatcctcgcc
gaaacctacggcctgatcgtctaccaagagcagatcatgttcatcgcccagaaggtggcg
tcctacacgatgggcaaggccgatgcgctgcgcaaggccatgggtaagaagaagctcgag
gtactggaagccgagtacaagggcttctacgagggaatgacggccaacgggttctccgag
aaggccgtgaaggcgttgtgggacaccattcttccgttcgccggctacgcattcaacaag
tcgcacgcggccggctacggcctggtgtcgtattggacggcgtatctgaaggccaactac
ccggccgagtacatggccggcttgttgacatcggtcggtgacgacaaggacaaggccgcc
atctacctcgccgactgccgccggctggggatcaccgtgttgccgccggacgtcaacgaa
tccgaattgaatttcgcctcggtgggttccgacatccgctacgggctcggcgcggtgcga
aacgtcggcgccaacgtggtcgggtcactgatcgccacccgaacccacaagggccgcttc
accgatttctccgactacctcaacaagatcgacatcgcagcctgcaacaagaaggtcacc
gagtcgttgatcaaggccggcgccttcgactcgctgggccatccgcgcaagggcctgttc
ctggtgcacaccgatgccgtggactcggtgctgggcaccaagaaggcccaggcgatgggc
cagttcgatctgttcggtggcggcgatggcgaaagcgccggagccgacgcggttttcggc
atccgggtacccgacgaagaatgggccgacaagcacaaactggccctggaacgggagatg
ctcggactctacgtctccgggcacccgctcaacggcatcgcccatctgctggccgcccag
gtcgacaccgcgatccccgccatcctggagggcgacatcgcctccgacacacaggtgcgg
gtcggcgggatcctggcatcggtgaaccgccgagtgaacaagaacggtctgccctgggcg
tcagcgcaattggaggatctcaccggcggcatcgaggtgatgttcttcccgcagacctac
tccgcctacggcgccgaggtcgtcgacgacgccgtggtgctggtcagcgccaaggtgaac
atccgcgacgaccggatctcgctgatcgccaacgagctggtggtgccggacttctccgcc
aacgccgcggatcgcccgctggcggtcagtctgccgacccggcaatgcaccatggacaag
gtcagcgcactcaaacaggtgctgacccgccatcccggaacggcacaggtgcagctgcgg
ctgatcagcggggagcggatcaccgtgctggaactggacccgtcgctgcgggtcacgcca
tcgtcggcgctgatgggggacttgaaggcgctactagggccgggctgcctcggcggctga
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