Moraxella nonliquefaciens: I6G26_00630
Help
Entry
I6G26_00630 CDS
T07003
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mnn
Moraxella nonliquefaciens
Pathway
mnn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G26_00630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnn03019
]
I6G26_00630
03009 Ribosome biogenesis [BR:
mnn03009
]
I6G26_00630
Enzymes [BR:
mnn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
I6G26_00630
Messenger RNA biogenesis [BR:
mnn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I6G26_00630
Ribosome biogenesis [BR:
mnn03009
]
Prokaryotic type
rRNA processing factors
I6G26_00630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QPT44598
LinkDB
All DBs
Position
44250..47954
Genome browser
AA seq
1234 aa
AA seq
DB search
MKRILINATHNEEIRVALCKDHHLYDFDLENRTREQKKANIYKGYITRIEPSLEAVFVEY
GSARQGFLPLREISAEYLNGNLRTDNIKDLIKEGDSVIVQVEKEERGNKGAALSTYVSLA
GRYLVLMPNKSKAGGISRQISGKVREEMKQIIASLSIPRGMSVIVRTAGLGKGFDDLQND
LNHLLQTWSAIQEKNRTHPSPCLVHQEAGVVTRAVRDYLRDDIGEVWIDSENAYNEAAHF
IASVMPTQMGKLRKYTDYEPLFGRFGVERQIETAYQREVRLPSGGSIVIDQTEAMVAIDI
NSAKSTKGSDVAETAYHTNLEAADEIARQLRLRDMGGLIVIDFIDMNDSRHQKEVEKRLI
EACRYDRARVQFGEISKFGLMEMSRQRLRPSLEEATGYICPRCHGNGMIRDLRSLALSIM
RQIEQIALKERMGEIQAEVPTEIAAFLLNEKRESLVYLEQDSGTRITVLPHAHLESPNFS
LHFNPNGFAPSSYDRIVDVEERESGDRGYDVNWQTKTDEPAITTNRWQKADNAGVKPQKD
TATNGKDGSAQKAPAHQSQAVAWLSNLFAPKPQAHLAYTLNNRDAAAAIESIINHGGVSL
GSFGTLTLPKEEHKEPKTDDKIHDKDNDKHHDKAERPTRFERDDKHKKKTKREHGDNDNQ
IKADKRESHDKDKNEKTDRRKKEQDHPKREPNSVRQSRGEMVRGETLTPADKANMANTDS
HKLDNPPHDKADKRADKGVDKSQNKPQTHESKPVSKADKTNDKTAKVDHNTRKSANPNEV
VLHISPINRSEMAGDVVHLSLDNSKSTPERTKAEPTKESTQDTKVAELTAQTEVQAKTAV
STQIRTLSDDTAITVNDAKANQQEQAAQADTTNTNANNAAQKANASTADVISTERLSTLA
YKMNKAINDPRVVAVALREKFSPIKTQSATTATGSTITGTAGEFIQSVLGNTLPQAWRDD
FVAYFLRAVDAIHADKPTETHSVADGEQEFEQAFAKQFANYGYAPLSNEYLADFAEHTTA
QRAWHIGQGKTKATPRPIGQRASNDPRGQYPSPDTSPVSNEMADESALGTIADGTMTSTT
KTHSSEAVDNFDQQSKSDTTDKVLASDESTLESLVQPLDDITDPTDEAKDDGKASDIKAQ
KMDDKADETTKTSPASYKDMIESVSGQLLQPMGILNLVTPKKPKPPKTKTPKPPKTPAKR
TSKAAQKAEVIKRKSKADDNAVLDKSPSDDNLAQ
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcattcttatcaacgcaacccacaacgaagagattcgtgtggcattgtgcaaa
gaccatcacctttacgattttgacctagaaaatcgcacacgtgaacaaaaaaaagccaat
atctacaaggggtacatcactcgtattgaaccatcattggaggcggtatttgtagaatat
ggctcagctcgtcaaggttttttaccacttcgtgaaatatccgctgaatacctaaacggc
aacctacgcaccgacaacatcaaagaccttatcaaagaaggggacagtgtcatcgttcag
gttgaaaaagaagaacgtggcaacaaaggagcagccctatctacctatgtgtcgctggct
gggcgttatttggtactcatgcctaacaaaagcaaggcaggaggcatcagtcgccaaatc
tcaggtaaagtacgtgaagagatgaagcaaatcatcgcaagcctatcaatacctcgtggc
atgagtgtcatcgtgcgaacagcggggctgggtaagggctttgatgacctacaaaatgac
ctaaaccatctactacaaacatggtcagccatccaagagaaaaatcgcacacaccccagc
ccctgccttgtccatcaagaagcaggcgtggttactcgtgctgtgcgtgattatctgcgt
gatgatatcggtgaggtgtggattgacagcgaaaacgcctataacgaagcggcacatttt
attgcatcggtcatgccaacccaaatgggaaaattgcgtaaatacaccgattatgaacca
ctgtttggtcgttttggtgtagaacgtcagattgagaccgcctatcagcgtgaagtacgc
ttgccatctggtggctctatcgtcattgaccaaaccgaagcgatggttgccattgacatt
aactccgccaaatccaccaaaggctcggatgtggctgagaccgcttaccacactaatttg
gaggccgccgatgagattgctcgccagttacgcctaagagacatgggaggtcttattgtc
attgactttattgacatgaacgactcacgccaccaaaaggaggtagaaaaacgcttaatt
gaagcctgccgttatgacagagccagagtgcaatttggtgagattagtaaatttggattg
atggagatgagtcgtcagcgtctacgcccatccttagaagaggccacaggctatatctgc
ccacgctgtcatggtaatggcatgattagggatttgcgttcgcttgccctgtccatcatg
cgtcagattgaacaaatcgccctaaaagagcgtatgggcgagattcaagctgaggtacca
actgagattgctgcctttttgttaaacgaaaaacgtgaaagccttgtctatttagagcaa
gattcaggcacacgcattaccgtcttgccccacgcccatttagaatcgcccaattttagc
ttgcactttaatccaaatggctttgccccatcaagttatgaccgcattgtggatgtagaa
gaacgtgaatctggcgaccgtggttatgatgtgaactggcaaaccaaaacggacgaacct
gctatcactaccaaccgttggcaaaaagcagataacgcaggagtcaaaccccaaaaagac
actgctaccaatggcaaggatgggtctgcccaaaaagcacctgctcatcaatcacaggct
gtggcatggctgtctaatctgttcgctcccaaaccacaagcacatcttgcttacacccta
aataacagagatgcagccgctgccattgagtctattattaatcacggtggtgtaagtttg
ggttcgtttggcactctaactctgcccaaagaagaacacaaagaaccaaaaactgatgat
aaaatccacgacaaagacaatgacaaacatcacgacaaggcagaacgccctactcgcttt
gaacgtgatgacaaacacaagaaaaaaaccaagcgtgaacatggcgacaatgacaatcaa
atcaaagcggacaagcgtgaaagccatgacaaggataaaaacgaaaaaactgaccgtcgc
aaaaaagaacaagaccaccccaagcgtgaaccaaactctgtacgccaatctcgtggcgag
atggtacgtggcgagacgctaacgcctgctgataaagcaaatatggcaaataccgacagc
cataagttggacaaccccccccatgataaagcagacaaaagagcggataagggtgtagat
aaatcacaaaacaaaccccaaacccatgaatcaaagcctgtatcaaaagcagataaaact
aatgacaaaactgccaaagttgaccacaacacacgcaaatctgccaaccccaatgaagtg
gtgttgcacattagccccatcaataggtctgagatggcaggtgatgtggtgcatctttcg
ctagacaacagcaaatccacgccagaacgcaccaaagccgaacctaccaaagagtccacc
caagataccaaagtagcagagctgacggcacaaacagaggtacaggcaaaaacagcagtt
agcactcaaatcagaactctaagtgatgatactgccatcactgtcaatgatgcaaaggca
aatcaacaagagcaagctgcccaagctgatacaaccaacaccaacgccaacaatgcagca
caaaaagcgaacgcatcaaccgctgatgtcatcagtacagaacgcctaagcacgcttgcc
tacaagatgaacaaagcaatcaacgacccccgagtcgtggcggtcgccctgcgtgagaag
tttagtccaatcaaaacacaatcagccactaccgccactggttctaccatcacaggtacg
gcaggcgaattcatccaaagtgtgctgggtaataccctgccccaagcgtggcgtgatgac
tttgtggcatactttttgcgtgcggtagacgccattcacgctgacaaacccacagagact
cactctgtggcagacggagagcaagagtttgaacaggcgttcgccaagcagttcgccaac
tatggatatgctccgctatcaaacgaatatctggcggactttgccgagcataccaccgcg
cagcgtgcatggcacatcggacaaggtaaaaccaaagccacaccacgccccatcggtcag
cgtgccagtaatgaccctcgtggacaataccctagcccagacacaagccctgtttccaat
gagatggcagacgaatctgctctgggtacgattgcagatgggacgatgacctctaccaca
aaaactcactcatccgaagctgtggacaattttgaccagcaatcaaaaagtgacaccacg
gataaagtgctagcatctgatgaatccaccttagaatctttggtgcaacccttggatgac
atcaccgacccaaccgatgaagccaaagatgatggcaaagcgtcagacatcaaagctcaa
aagatggacgataaggcagatgagaccaccaaaaccagtcctgccagctataaggacatg
attgaaagtgtctcaggtcagctactacaaccgatggggattttaaatttggtaacgccc
aaaaagcccaaaccccccaaaacaaaaaccccaaaaccccccaaaacccctgccaaacga
acatccaaggcagcccaaaaagcagaagtcatcaaacgcaaatccaaagccgatgataat
gctgtgcttgataagtcaccatcagatgataatctggcacaataa
DBGET
integrated database retrieval system
