Moraxella nonliquefaciens: I6G26_04795
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Entry
I6G26_04795 CDS
T07003
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mnn
Moraxella nonliquefaciens
Brite
KEGG Orthology (KO) [BR:
mnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mnn03016
]
I6G26_04795
Enzymes [BR:
mnn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
I6G26_04795
Transfer RNA biogenesis [BR:
mnn03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
I6G26_04795
Prokaryotic type
tRNA splicing ligases
I6G26_04795
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
QPT45309
UniProt:
A0A1B8QMC3
LinkDB
All DBs
Position
903849..905063
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AA seq
404 aa
AA seq
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MSIGLILNENGNNGVPVKIFTKDVEQKALNQLYAMSQLQFIHSHIAVMPDVHAGKGATVG
SVIPTKSAIIPSAVGVDIGCGMNALRLSIKAEQLPDNLKPARLAIEKHVPVGFEKHKQIM
AKMSTLDPLAIRLKKITDKHKGLLKMMSNFDRTWAKQLGTLGGGNHFIELCVDENDDVWI
MLHSGSRGIGSCIGEYFISLAKKVNETCFGYIPDRELSYLAQGTPFFEDYIEAVGWAQDY
ATENRKEMMRLIIKALQSKDAQFPRFTVTKEAINCHHNYVSRERHFGSSVYVTRKGAISA
YEGELGIIPGSMGAKSYIVRGRGNSESFCSCSHGAGRKMSRGRAVREFGLADLVSQTDGI
ECRKDKGVLDEIPQAYKDIDEVMANQTDLVEVVHTLKQVMCIKG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcggacttattttaaatgaaaatggcaacaatggcgtgcctgtcaaaatcttt
accaaagacgtggaacaaaaggcgttaaatcagctctacgcgatgagccagttgcaattt
atccatagccatatcgccgtcatgcctgacgttcatgcgggcaagggggcgactgtgggg
agcgtgattccgaccaaatcggcaatcattccgtctgcggtgggcgtggatattggctgt
ggcatgaacgccctacgcctgtctatcaaggcagagcagttgcccgacaacctaaaacct
gcccgccttgccattgaaaaacacgtccctgtcggctttgaaaagcacaagcaaatcatg
gcaaaaatgagtacgcttgacccgcttgccattcgtctcaaaaaaattaccgacaagcac
aagggtttattgaaaatgatgagtaactttgacagaacgtgggcaaaacagcttggcacg
ttgggcggtggcaatcactttattgagctgtgcgtggacgagaacgatgatgtgtggatt
atgcttcactctggttctcgtgggattggctcgtgtattggcgagtattttatcagtctt
gccaaaaaagtgaatgagacgtgttttggttatattcctgaccgtgagctgtcgtatttg
gcacagggtacgccgttttttgaggattatattgaggcggtgggctgggctcaggactat
gcgactgaaaaccgcaaggagatgatgagactcattatcaaagccttacaaagcaaagac
gcacaatttccccgctttaccgtaaccaaagaggcgataaactgtcatcacaactatgtc
agccgtgagaggcattttggcagttcggtctatgtaactcgcaagggggcgattagtgcc
tatgagggcgagcttggcattatccctggctctatgggggcgaaatcctatatcgtgcgt
gggcgtggcaatagcgagagtttttgttcgtgttcgcatggggcagggcgaaaaatgagc
agggggcgtgcggtgcgtgagtttggcttggcggatttggtgagccaaacggacggtatc
gaatgccgtaaagataagggcgtgttggacgaaattccacaggcgtataaagatattgat
gaggtcatggcaaaccaaaccgatttggtggaggttgtgcataccttaaagcaggtgatg
tgtattaaggggtga
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