Moraxella nonliquefaciens: I6G26_06505
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Entry
I6G26_06505 CDS
T07003
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mnn
Moraxella nonliquefaciens
Brite
KEGG Orthology (KO) [BR:
mnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnn03019
]
I6G26_06505 (hrpA)
Enzymes [BR:
mnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
I6G26_06505 (hrpA)
Messenger RNA biogenesis [BR:
mnn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
I6G26_06505 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
HA2_N
T2SSE
nSTAND3
NACHT
SRP54
AAA_30
PhoH
Motif
Other DBs
NCBI-ProteinID:
QPT43742
LinkDB
All DBs
Position
1252103..1256308
Genome browser
AA seq
1401 aa
AA seq
DB search
MLTTQNTKKPQLLAKDRHIVHRLERELQGNFPADIKAKKQSQLDSIVQRSTRAVQARMDG
MPSDLAGRLNTDLPVSARADEIVRAIQTHQVIIVAGETGSGKTTQLPKLAMLAGRGMTGQ
IGHTQPRRLAARSVAMRIADELGEPLGQTVSFKVRFNEQGSKNSLIKLMTDGILLAELGR
DKFLTRYDTIIIDEAHERSLNIDFILGYLKRLLPKRPDLKVIITSATLDTVRFAEYFKSA
VKADVPIINVQGRSYPVQTRYRPLTDEVIKSHDDDVFDEIEDKLPRALTAAVAECFEDAR
IKGHPMQSDILIFASTEAQIREIQEVLTTHAPPHTQILPLFARQSFAEQQRIFNPTGGRR
IIISTNVAETALTVPNIRYVIDLGFARVSRYSHRSRIQRLPIEAISQAAANQRQGRCGRI
GDGVCIRLYSKEDFDSRPPFTEPEILRTNLASVILQMEHLGLGDVAEFDFITPPDLRLIN
DGRKLLYELGALSDVPTKTAFKKALKGQMDKENAKKRHSSNLSDIGKKMARMPIDPRLAR
MLIAGHEFACLDKMLVIVSALAVQDVRERPADKQSQADQKHALFRRDNSDFLFYLALFDV
LFNAHEMHGGDRLTGNGRKNFAKKHYLSFPRIKEWQKTHEQLSQMMVDLGYQIADANNLD
NKTDDKKDTPKGRIGLKGGKRAKADNSAILASLKKQAKTKLPLSEDYTSIHRALLTALLS
FVAHKTDVVGEYLMTKNQKARIFPASTLHKKGADWVLAFEVVETSQVYMRTLAKIEPEWI
LSAGKNLLKYHYFEPHWSKKAGRVQAYAQISLFGLIVVHKQLVNYETIDPSASREIFIRD
ALVGDVQDNQTGERYPKALGFLTHNRQKIKDVGDTEDKLRRRDLLVDEQRLYEFYDDKIP
SHIASAKAFEDWLGKMGDDEFLKFKDSDVILDAVSVGQEFPKFWQVGVARFPLSYVFDPS
SDDDGVSVKVGVGALSQLDSVDLLWGVAGWRFELVVGLLKTLPKDIRRKIVPIPDTANAL
MDKLTKGNGVGLLDQLCHHLLRMGVHVAADDFRIHEIDKYLQPLICVLDDKGRVIEKGRD
LEKLQAKYRTHAQIPTVFEGIHDNFPEHFEFMKTRHHKGMVTQAFFALSPDETAKVSVVE
FGDLAEALAMHKKGVLSLIKMTLGAKQKQLTSQIDKAFKMAFAPLGDLEKLKNTLVDATL
QVTFDKYAKRFYGHVREKVAGFVRDERMGDLLDTLPLSAGEFLVVKELIHEKFLAVGQEM
LQVLKEIYTTWQHVRGQLLMLDREIFGESIDDIEDQLDDLSLHDFIYRTDFVVWQAYPRY
LNALRIRLDRLPNNLDADTDAVYLLDEHMERLANRVHDPKIAKYRWLVEEYRIQLFAQPM
KTAVPVSAKRLDKVWANVTTR
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaacacaaaatacaaaaaaaccccaattactcgccaaagaccgccatatcgtt
catcgcttagagcgtgaattgcaaggtaattttcctgctgacattaaagccaaaaaacaa
tcccagcttgatagcatcgtacagcgttccactagggcggtgcaggctcgcatggatggc
atgccatcagatttggcagggcgattaaataccgatttacctgtaagtgctcgtgctgat
gagattgtccgtgccatacagacccatcaggtcatcatcgtggcaggcgagacaggttcg
ggtaagacaacccaactgcccaaacttgccatgctggcagggcgtggcatgacagggcaa
attgggcatactcagcccagacgacttgccgctcgcagtgttgccatgcgaattgcagat
gagcttggtgaacctttggggcagacggtgagttttaaggtgcgatttaatgaacagggc
agtaaaaacagcctgattaaactcatgacggatggcattttgcttgctgagcttgggcgt
gataaatttttgacacgctatgacaccatcatcattgatgaagcacacgagcgtagttta
aatattgactttattttaggttatctaaaacgcttactgccaaaacgccctgacttaaag
gtcatcatcacctctgctactttggacaccgtccgatttgctgagtattttaaaagtgcg
gtaaaagccgatgtgccaatcatcaacgtgcaaggacgaagctaccctgtgcagacacgt
tatcgccctttgacagatgaggttatcaaaagccatgacgatgatgtctttgatgagata
gaggacaaattgccacgagctttaaccgctgctgttgctgagtgttttgaagatgcacgc
atcaaagggcaccccatgcagtcggacattttgatttttgccagcaccgaagcccaaatt
cgtgaaatacaagaggttttgacaactcacgcaccgcctcacactcagattcttcccctg
tttgctcgccaaagttttgccgaacaacagcgaatttttaatcccacaggcggtcgtaga
atcatcatctcaaccaacgttgctgaaactgccttgaccgtgccaaatatacgctatgtg
atagatttgggctttgctcgtgtgagccgttacagccatcgctcacgcattcaacgcctg
cccattgaagcgataagccaagcggcggcgaaccaacgtcaaggacgttgtgggcggatt
ggggatggtgtgtgtatacgcctgtactcaaaagaggattttgacagccgtccacccttt
accgaacctgagattttgcgtaccaatttggcaagcgtgattttgcaaatggagcatttg
gggctgggtgatgtggcagaatttgactttattacaccgcctgatttacgccttatcaat
gatggtcgcaaattgctctatgagcttggggcgttgtctgatgtgccaaccaaaaccgct
tttaaaaaggcattaaaggggcagatggacaaagaaaatgccaaaaaacgccattcatcc
aatcttagcgacattggcaagaaaatggctcgcatgcccatagacccacgccttgcccgc
atgctcattgcagggcatgaatttgcctgtcttgataaaatgcttgtcatcgtatccgct
cttgctgtgcaagatgtgcgtgagcgacctgccgacaagcagtcgcaagctgaccaaaaa
catgccttgtttcgtcgtgataactcggactttttgttctatttggcattgtttgatgtg
ttgtttaacgctcatgagatgcacggaggcgataggctaacaggcaacggacgcaagaat
tttgccaaaaaacattatctgtcttttcctcgtatcaaagaatggcaaaaaacgcatgaa
cagcttagtcagatgatggtggatttgggttatcagattgccgatgccaacaatcttgac
aacaaaactgatgacaaaaaagacaccccaaaaggacgcattggcttaaagggtggtaaa
agagctaaggcggataacagtgccattttagccagtcttaaaaaacaagccaaaaccaaa
ctgccacttagcgaagattataccagcattcatcgggctttattgaccgctcttttgtcc
tttgtcgcccataagaccgatgtggtgggcgagtatctgatgaccaaaaaccaaaaggca
cgcatttttcctgccagtaccttgcataaaaaaggtgcagattgggtgcttgcctttgaa
gtggtagaaacttcacaggtatatatgcgtacacttgctaagattgaacctgagtggata
ttgtccgcgggcaaaaatctcttaaaataccattattttgaaccgcattggtcaaaaaaa
gcagggcgagtgcaagcctatgcccaaattagcttgtttgggcttattgttgtgcataaa
cagctggtcaattatgaaaccattgacccatcagcaagccgtgagatattcatccgtgat
gctctggtgggggatgtgcaggacaatcaaacaggcgagcgttatcccaaagccttgggg
tttttgacccataaccgccaaaaaatcaaagacgtaggcgataccgaagataagctaaga
cggcgagatttactcgtagatgagcagagactttatgaattttatgatgataaaatccca
tctcacattgcatcagccaaggcatttgaagactggcttggtaaaatgggcgatgatgag
tttttaaaattcaaagacagcgacgtgatacttgatgctgtcagtgttggtcaagaattc
cccaaattttggcaagtgggagtagcccgattccctttgtcttatgtgtttgacccaagt
tcagatgatgatggtgtgagtgttaaagtgggggtgggagcattatctcagcttgacagt
gtggatttattgtggggtgtggcaggctggcgatttgagttggttgtaggactgttaaag
accctgccaaaggacattcgccgaaaaatcgtccccatccctgataccgccaatgccttg
atggataaattgacaaagggtaatggcgtgggactgcttgaccaactttgtcatcatctg
cttagaatgggcgtacatgtggcggcggatgattttaggattcatgagattgataaatac
ttgcagcccctgatttgtgtgcttgatgacaaggggcgagtgattgaaaaagggcgagat
ttggaaaaattacaagccaaataccgcacgcatgcccagataccaactgtgtttgagggc
attcatgacaacttccctgagcattttgagttcatgaagacccgccatcataagggtatg
gtaacacaagcctttttcgccctaagccctgatgagacagcgaaggtgtctgtggtggaa
tttggtgatttggcagaagcattagccatgcataaaaaaggcgtgctgtcgcttattaaa
atgacacttggggcaaaacaaaaacagctgacatcccaaattgataaagcctttaaaatg
gcgttcgcccctttgggtgatttggaaaaattaaaaaacacgctggtggatgcaaccttg
caagttacttttgacaaatacgccaaaagattttatggtcatgtgcgtgaaaaagtggca
ggctttgtgcgtgatgagcgtatgggagatttactagacacattacccctaagtgcaggc
gagtttttggtggtcaaggagctgatacatgaaaagtttttggcagtgggacaagagatg
ttgcaggtactaaaagagatttataccacatggcaacatgtgcgtgggcaactgctcatg
cttgaccgtgagatttttggtgagagtattgacgacattgaagatcagctggatgatttg
tcgcttcacgactttatttatcgcactgactttgtggtgtggcaagcatacccacgttat
ctaaatgccctaagaatccgccttgacagactgccaaataacctagacgctgacaccgat
gcggtatatctgcttgatgaacatatggaacgactggcaaaccgtgtgcatgaccccaaa
atcgctaaatatcgttggcttgttgaagaatatcgcatacagttatttgcccagcccatg
aaaacagcggtgcctgtctcagccaaacgacttgataaggtgtgggcaaatgttaccact
cgctga
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