KEGG   Moraxella nonliquefaciens: I6G26_07515
Entry
I6G26_07515       CDS       T07003                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
mnn  Moraxella nonliquefaciens
Pathway
mnn02024  Quorum sensing
mnn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mnn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    I6G26_07515 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    I6G26_07515 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mnn03019]
    I6G26_07515 (hfq)
   03036 Chromosome and associated proteins [BR:mnn03036]
    I6G26_07515 (hfq)
Messenger RNA biogenesis [BR:mnn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     I6G26_07515 (hfq)
Chromosome and associated proteins [BR:mnn03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    I6G26_07515 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: QPT43921
UniProt: A0A1B8QIU6
LinkDB
Position
complement(1479647..1480270)
AA seq 207 aa
MSKGQSLQDPFLNALRKDRIPVSIFLVNGIKLQGQIESFDQYVVLLKNTVSQMVYKHAIS
TVVPTRNPRADGTTSGTATGAGYPSSVGGVMGGSNYQGTGYPNAGFERQGFGSATNATRP
VGGFTRTPPNQGFGSGQGFERTGYVQGGMGFNQGFERTGFDERGFDGKGFEKNERGFDGR
GFDNFDNKAFDDSAFDRQGFDKNKDDE
NT seq 624 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcaaagcctacaagacccatttttaaacgctctgcgtaaagaccgcatt
cctgtatctatttttttggtcaatggcatcaagctacaaggtcagattgaatcatttgat
cagtatgttgtcctactcaaaaataccgtaagtcaaatggtctataagcatgccatttct
acggttgttcctactcgcaatcctcgtgcagacggtacaacttctggtacagccacaggt
gcaggttatccatcatcagtgggtggcgtgatggggggtagtaactatcaaggcacaggc
tatcccaatgcaggttttgaacgtcagggctttggcagtgcaacaaatgcaacccgtcct
gttggtggctttactcgcacgccgccaaaccaaggctttggcagtggtcaaggttttgag
cgtacaggctatgtgcaaggaggcatgggctttaatcaaggttttgagcgtacaggtttt
gatgaacgtggttttgatggcaagggttttgagaaaaatgagcgtggttttgatggcagg
ggttttgataattttgataataaagcctttgatgacagtgcctttgaccgtcaaggattt
gataaaaacaaggatgatgaatga

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