Moraxella nonliquefaciens: I6G26_09570
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Entry
I6G26_09570 CDS
T07003
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mnn
Moraxella nonliquefaciens
Pathway
mnn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mnn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I6G26_09570 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnn03021
]
I6G26_09570 (rpoC)
03400 DNA repair and recombination proteins [BR:
mnn03400
]
I6G26_09570 (rpoC)
Enzymes [BR:
mnn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I6G26_09570 (rpoC)
Transcription machinery [BR:
mnn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I6G26_09570 (rpoC)
DNA repair and recombination proteins [BR:
mnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I6G26_09570 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
QPT44292
LinkDB
All DBs
Position
complement(1940259..1944488)
Genome browser
AA seq
1409 aa
AA seq
DB search
MKDLLDIMKSPADGGLKEFDSIQISLASPDTIKSWSHGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDFECLCGKYKRRKFQGIICEKCGVEVTTAKVRRDRMGHIELASPVAHIWFLK
SLPSRIGLLLDITLRDIERVLYFESYIVTDPGMTSLEKYQLLDDEQYFNALEQYGDEFIA
KMGAEAVQDLLKDIDVDGEIDELRTAIPQTGSETKLKKMSKRLQLLEAFRDSGNKPEWMV
MTVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRM
LQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVG
PTLRLHQCGLPKKMALELFKPFTYAKLLQNNIAQTIKAAKKMVEREEPVVWDMLASVIRE
HPVLLNRAPTLHRLGLQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQL
EARALMMSTNNVLSPANGDPIIVPSQDVVLGLYYISRSHVNAKGENMTFSTVNEALRAIG
SDDLSVNAKVKVRVTETILDEKTGEKTTKTEIKDTVAGRLLIWNIMPEGMAFEECNKEMT
KKNISKLLNSCYRQLGVKESVLFADHLMYLGFAQATLSGISIGMEDMVIPPNKKEIVDAA
DAEVREIEQQFEGGFVTAGERYNKVVDIWSRTSDKIANAMMDNLSTDEVINSQGEIEREK
SFNSIYMMADSGARGSATQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFISTH
GARKGLADTALKTANSGYLTRRLVDVAQDLVITHDDCGTDAGQLITPVIKGGDIVERLGD
RVLGRVTAKDVVNHDGEVIILAGTLIDERLVEVLDNNAIDEVYVRSVITCEATQGVCAKC
YGRDLARGHLVNIGESVGVMAAQSIGEPGTQLTMRTFHVGGAASAASVDNSVSVGNNGTV
RFHNMKTVEHTDGHLVVVSRSAEIGVTDSQGRERERYKVPYGSNILVRDGDEVSAGDVIA
KWDPHTHPIITEFAGTARFSDIADGMTATVKVDETTGMSSFEVLAGKDRPSLSKDLRPAI
ILDTTDGREVVYFLPAETVIRVSEGETVAAGSVLGRVPQATSGTKDITGGLPRVADLFEA
RKPKDHAIMAEVSGTVSFGKETKGKNRFIITDEEGNEHEELIPKWRQINVFEGEHVECGE
VISDGPQNPHDILRLKGETALANYVVKEVQEVYRLQGVKINDKHIEVIIRQMLRKVEVID
GGDSSYFKGDQVEYTKVRALNEEFTANGKSPITYERQLLGITKASLATESFISAASFQET
TRVLTAAATMGKVDDLSGLKENVVVGRLIPAGTGLAYHQNRQRLAERGLEPVITVTEDPY
ANPVDTLLAKTDAEVDLAAAFASEFGQSE
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagatttattagacatcatgaaaagccctgctgatggtgggctaaaagagtttgac
agcattcaaatttctttggcaagtcctgataccatcaaatcatggtcgcatggtgaggtt
aaaaagccagaaaccattaactatcgtacctttaagcctgagcgtgatggtctgttttgt
gccaagatctttgggcctgtgaaggactttgaatgtctgtgtggcaaatacaaacgccgt
aagtttcaaggcattatttgtgaaaaatgtggtgtggaggtaactactgccaaagttcgc
cgagaccgcatgggtcatattgagcttgccagtcctgtggcacatatttggttcttaaaa
tccttaccaagtcgcattggtctgttgcttgatattaccctgcgtgatattgagcgtgtg
ctttattttgaaagctatatcgtaaccgaccctggcatgacaagccttgaaaagtatcaa
cttttggatgatgagcaatattttaatgccctagaacaatacggcgatgaattcatcgca
aaaatgggtgcagaggctgttcaagatttgttaaaagacattgatgttgatggtgagatt
gatgagcttcgtactgccattccccaaacaggctctgagaccaagcttaaaaaaatgtca
aaacgcttgcaactgctagaagcgttccgtgattcaggtaataagcctgaatggatggtg
atgacagtattgcctgtcttgccacctgacctacgccctttggtaccacttgaaggcggt
cgttttgccacctctgatttgaatgatttatatcgccgtgtcatcaatcgtaataaccgt
ctaaaacgtctgcttgaacttaatgcccctgacatcatcgtacgtaacgaaaagcgtatg
ctccaagaggcggtagatgcactcttagataacggtcgtcgtggtcgtgccatcacaggt
tcaaacaagcgtccactcaaatcgcttgctgatatgattaagggcaaacaaggtcgtttc
cgtcaaaacctgctgggtaaacgtgtagactattctggtcgttcggtcatcgtggtaggc
cctaccttgcgtctgcaccaatgtggtctgcccaagaaaatggcattagagttgtttaag
ccatttacttatgccaaactgttacaaaataacattgcccaaaccatcaaagctgccaaa
aaaatggtagagcgtgaagaacctgtggtgtgggacatgcttgcaagcgtcattcgtgag
catcctgtgctacttaaccgtgccccaacgcttcaccgtctgggcttgcaagcctttgag
cctgttcttattgagggtaaggccattcagctacatcctttggtatgtgcagcgtttaac
gccgactttgacggtgaccaaatggcggttcacgtgccattaaccttagaggctcagctt
gaagctcgtgccttgatgatgtctaccaataacgttttatcgcctgccaacggtgacccg
atcattgtgccatcacaagatgtggtacttggtctgtactatatcagtcgcagtcatgtc
aatgccaagggcgaaaatatgacatttagcaccgtcaatgaggctttacgtgccattggc
tctgatgatttgtcggttaatgccaaggtcaaagtgcgtgttactgagacgattttggat
gaaaaaacgggtgagaaaaccaccaaaaccgaaatcaaagacacagttgcagggcgtttg
cttatttggaatatcatgccagagggtatggcttttgaagaatgcaacaaagagatgacc
aagaaaaatatctctaagctactaaattcatgttatcgtcaattgggcgtcaaagaatcc
gttctgtttgctgaccatttgatgtatctaggctttgcccaagcgaccctatcaggcatc
tcaatcggtatggaagacatggtgattccaccaaacaaaaaagagattgtcgatgctgcg
gacgccgaggtacgtgagattgaacagcagtttgagggtggttttgttaccgcaggtgaa
cgctataacaaagtggttgatatttggtctcgtacatctgataaaatcgccaatgcgatg
atggataacttatcgactgatgaggtgataaacagtcaaggtgagattgagagggaaaaa
tcctttaactctatctatatgatggcagattctggggctcgtggtagtgccactcagatt
cgtcagcttgctggtatgcgtggtttgatggcaaaaccagatggctctatcattgagaca
cccatcaaggcgaacttccgtgaaggtttgacggtactccaatactttatctcaacgcac
ggtgctcgtaaaggtcttgctgataccgccctaaaaactgccaactcaggttatctaact
cgtcgtttggtggacgtggcacaggatttggtgattacccatgatgactgtggtactgat
gcaggacagcttataacccctgtgattaagggtggtgatattgttgagcgtttaggtgat
cgtgtgctgggtcgtgtaactgccaaagatgtcgtcaatcacgacggcgaggtgattatt
cttgcaggtacgctcattgatgagcgtttggttgaagtgttagataacaacgccatcgat
gaggtgtatgtacgttcagtcattacctgtgaagcaacgcaaggtgtgtgtgctaagtgt
tatggtcgtgatttggctcgtggtcatttggttaatattggcgagtcggttggtgttatg
gcagcacagtctattggtgaacctggtacacagctgaccatgcgtactttccacgtcggt
ggtgcagcaagtgccgcatcagtggacaacagtgtgtctgtgggtaataacggtacggta
cgttttcataacatgaagaccgtagagcatacagatggtcatttggtggttgtatcacgt
tcagctgaaattggcgtgacagactcccaaggtcgtgagcgtgaacgttataaagtgcca
tatggttctaacattttggtgcgtgatggtgatgaggtgagtgcaggcgatgttattgcc
aaatgggatccacacacccatccaatcattaccgaatttgctggtacggcacggtttagc
gatattgcagatggcatgaccgcaactgtcaaggtagatgagaccacaggcatgagctcc
tttgaggtgttggcaggtaaagaccgtccaagcctatccaaggatttgcgtcctgccatc
atcttagacacaacagacgggcgtgaggtggtctatttcctacctgctgagactgtgatt
cgtgtgtcagagggtgagacagtagcagcaggttcggtactcggtcgtgtgccacaagcc
acatcaggcaccaaagacatcaccggtggtctaccacgagtggctgatttgtttgaagct
cgtaagccaaaagaccatgccatcatggcagaggtcagtggtacggtgtcatttggtaaa
gagactaagggcaaaaaccgctttatcatcacagacgaagagggtaatgagcatgaagag
ttgattccaaaatggcgtcaaatcaacgtgtttgagggcgaacatgtggagtgtggcgag
gttatctctgatggccctcaaaatccacatgacatcttgcgtctaaaaggtgagacagca
ttggcaaattatgtggtcaaggaagtccaagaggtttatcgcttgcagggtgtgaagatt
aatgataagcacattgaggtgattatccgtcaaatgcttcgtaaggtggaggtgattgat
ggaggtgattctagctactttaaaggcgatcaggtggaatacaccaaagtacgtgcccta
aacgaagaattcaccgccaatggtaaatcccccatcacctatgagcgtcagttgctgggc
attaccaaagcatcgcttgcaacagagtcgttcatctcagcggcatcattccaagagacc
acacgtgtcttaacggcagcggcaacgatgggcaaagtagatgacttgtcaggtcttaaa
gagaatgtggtggttggtcgtttgattcctgctggtactggtttggcatatcatcaaaac
cgccaacgcttggctgagcgtggtttggagcctgtgattaccgttaccgaagacccatac
gccaaccctgttgatacattgcttgccaaaacagatgccgaagttgaccttgcagcagca
tttgccagtgaatttggtcaaagtgaataa
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