Moraxella nonliquefaciens: I6G26_09575
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Entry
I6G26_09575 CDS
T07003
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mnn
Moraxella nonliquefaciens
Pathway
mnn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mnn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I6G26_09575 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnn03021
]
I6G26_09575 (rpoB)
03400 DNA repair and recombination proteins [BR:
mnn03400
]
I6G26_09575 (rpoB)
Enzymes [BR:
mnn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I6G26_09575 (rpoB)
Transcription machinery [BR:
mnn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I6G26_09575 (rpoB)
DNA repair and recombination proteins [BR:
mnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I6G26_09575 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
QPT44293
UniProt:
A0A1B8QRW4
LinkDB
All DBs
Position
complement(1944563..1948669)
Genome browser
AA seq
1368 aa
AA seq
DB search
MAYSYTEKKRIRKSFSRLPDVMDVPYLLAIQVDSYEQFLQEHKKPAARANIGLQAAFSSI
FPITSHSGNAELQFIEYYLGEPEFDERECIMRGSTFAAPLRVKIRLVVKDKDVKDKESKA
AIKDIKEQVVYMGEMPLMTDNGTFIINGTERVIVSQLHRSPGVFFDHDKGKSHSSGKVLY
NARIIPYRGSWLDFEFDVKDLVYARIDRRRKLLATIILRAIGMNTADILSTFFETVDVFK
GDSGFEIELVPERLQGEMAQFDIVSPDGKVIVEQGKRINARRIKEIQASGMTKLAVPDEY
LYERVLAQDVIYHDEVIARANSLIDHELLIKLIDKDIKAFKILFTNDIDHGAYIADTLRA
DTINTREEALIEIYKIMRPGEPPTLETAEKLFESMFFSHERYDLSNVGRMKFNRRLGRDF
VNSDSIDVQREQGVLSNQDIVDVLKELIEIRNGRGEVDDIDHLGNRRIRSVGEMTENQFR
IGLARVERAVKERLTVAESDNLSPQDLINSKPVAASIKEFFGASQLSQFMDQNNPLSEIT
HKRRVSALGPGGLTRERAGFEVRDVHTTHYGRVCPIETPEGPNIGLINSLAVFAKTNNFG
FLETPYRRVVDGKVTDDIEYMSAIEEVGAVVAQADSPMNEHGELTEEMVMVRHHGESVRM
SPDKVTHMDVSPRQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGME
RHVARDSGVCVVAKRGGVIEEVDASRIIVRVNDAEMIAGEAGIDIYNLIKYTRSNQNTCI
NQRIIVNAGDVIARGDILADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILLSERVVQE
DRFTTIHIQELTCVARDTKLGPEEITGDIPNVGEAALSNLDEAGIVYIGAEVDAGDILVG
KVTPKGESQLTPEEKLLRAIFGEKAADVKDTSLRVPSSTKGTVIDVQVFTRDGLEKDSRA
KAIEKAMLDDYRKDLKEELVIFEAAARGRIITLLDGKKVSGGAGFKAGTVLTGTDMESLA
LETLLDIQPAEEEISERLTQIADYLTDKQKEIDDKFARKKAKLTAGDDLAHGVQKIVKVY
LAVKRRIQPGDKMAGRHGNKGVVSRIMPVEDMPYDENGNPVDIVLNPLGVPSRMNIGQVL
ETHLGMAARGLGDRINAMLRSQVAVGELREFLDKIYNQVGGEQVDLDSLSDEDILAMADN
LRAGVPMGTAVFDGAKETQIKELLTLAGLDESGQQTLYDGRTGKKFDRPVTVGYMYMLKL
NHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGATYTLQEMLTVKS
DDVEGRTRMYKNIVDGEQYMNPGMPESFNVLTKEIRSLGINIDLKEKK
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggcatattcttatactgaaaaaaaacgtattcgtaaaagtttttctcgtctgcctgat
gtgatggacgtgccgtacttgctcgccattcaggtggattcttacgagcagtttttacaa
gaacacaaaaaacctgctgcccgtgctaatattggtttgcaagcagcattttcatctatt
tttccgataaccagccattctggtaatgctgagttgcagtttattgaatattatttgggt
gaacctgagtttgatgaacgtgaatgtatcatgcgtggttcaacctttgccgctccactg
cgtgtcaagattcgtttggtggtcaaagacaaagatgtcaaagataaagagagtaaagcg
gcgattaaagatatcaaagagcaagttgtgtatatgggtgagatgccactcatgaccgat
aatggtacattcatcattaacggtactgaacgtgtgattgtctcacagttgcaccgttca
ccgggcgtattctttgaccacgacaaaggtaaatcgcattctagtggtaaagtgttatat
aacgctcgtatcattccttaccgtggttcatggcttgactttgaatttgacgtcaaggat
ttggtgtatgctcgtattgaccgtcgccgtaaattgcttgcaactattatactgcgtgcc
atcggtatgaatactgccgatattttatccacattctttgagaccgtagatgtttttaaa
ggggatagtggttttgagattgagcttgtacctgagcgtctacaaggcgagatggcacaa
tttgacattgtctcacccgatggcaaggtgattgttgaacaaggcaaacgcattaacgca
cgccgtatcaaagaaatccaagcatctggtatgactaaattagctgtgcctgatgagtat
ctttatgagcgtgtccttgcccaagatgtgatttatcatgatgaggtcattgctcgtgct
aatagcttgattgatcatgagttgcttattaaactcattgataaagatatcaaagccttt
aaaatcctatttaccaatgacattgaccatggagcgtatatcgctgatacgctacgtgct
gacacgattaatacacgtgaagaggcactcattgagatttataaaatcatgcgtccaggt
gagccaccaaccttagaaactgctgaaaaactatttgaatccatgttttttagccatgag
cgttatgatttgtcaaatgttggtcgcatgaagtttaaccgccgtttgggtcgtgatttt
gtaaatagcgacagtattgatgtgcaacgtgaacagggtgtgttatccaatcaagacatt
gttgatgtactaaaagagttgattgaaattcgtaatggtcgtggtgaggttgatgatatt
gaccatttgggtaaccgtcgtatccgctcggttggtgagatgaccgagaatcaattccgc
attggacttgcaagagtagagcgtgctgtcaaagagcgtttgactgttgccgaatctgac
aatctgtctccccaagatttgatcaactctaagcctgtggcagcttccatcaaagaattt
tttggtgcatcgcaactgtcgcaatttatggatcaaaacaacccattatcagagattacc
cataagcgtcgtgtctctgccttaggtcctggtggcttaactcgtgagcgtgcaggcttt
gaggttcgtgatgtacacaccacgcactacggtcgtgtgtgtccgattgagacgccagag
ggtccaaacattggcttgattaactcattggcggtttttgccaagaccaataactttggg
tttttagaaacgccttaccgtcgtgttgttgatggtaaggtaaccgatgacattgaatac
atgtctgccattgaagaggttggggctgttgttgcccaagcagattcacccatgaacgaa
catggcgaactgaccgaagagatggttatggtacgccatcatggtgaatcggtacgaatg
agtcctgataaagtaacacatatggacgtctcgccacgccaagtggtgtcagtggcagca
agtttgattccatttttggagcatgatgatgccaaccgtgctttgatgggttcaaacatg
caacgtcaagcagtaccaaccttgcgtgctgataaaccgcttgtgggtacaggcatggaa
cgccatgttgctcgtgacagtggcgtgtgtgttgtcgccaaacgtggcggtgtgattgaa
gaggttgatgccagtcgtattatcgtacgtgtcaatgatgctgaaatgatcgcaggtgag
gcaggtattgatatttataacctcatcaaatacactcgctccaaccaaaacacctgtatt
aaccaacgcatcattgtcaatgctggcgatgtgattgctcgtggtgatatcttggctgat
ggcccatctactgatttgggtgaacttgctttgggtcaaaacatgcgtgtggcgtttatg
ccatggaatgggtataactttgaggactctattttgctctctgagcgagtggttcaagaa
gaccgtttcaccacgattcacattcaagagttaacttgtgtggctcgtgataccaaactt
gggccagaagagattacaggcgatattccaaacgtgggcgaggcagctctgtctaatctt
gacgaagcgggtattgtctatatcggtgctgaggtggatgctggtgatattttggttggt
aaagtaacaccaaaaggtgaaagtcagctgaccccagaggagaagttacttcgtgccatt
tttggtgaaaaagcggcggatgttaaagacacatctttgcgtgtgccatcatcaaccaaa
ggtacggttattgacgtgcaagtctttacccgtgatggattggaaaaagacagccgtgcc
aaagccattgaaaaagcaatgcttgatgattatcgtaaagacctaaaagaagagcttgtt
atttttgaagcggcggcacgtggtcgcatcatcaccttgttagatggtaaaaaagtctca
ggcggtgcaggctttaaagcaggtacggtactaacaggtactgacatggagagcttagca
cttgaaaccttgcttgacattcaacctgccgaagaggaaatctctgaacgtctcactcag
attgctgattacttaaccgataagcaaaaagagattgatgataaatttgccagaaaaaaa
gccaaactaaccgcaggtgatgatttggctcatggtgtgcaaaaaatcgtgaaggtatat
ttggcggtaaaacgtcgcatccagccaggtgacaagatggcaggtcgtcacggcaacaag
ggtgtcgtctctcgcatcatgccagttgaggatatgccttatgacgaaaatggcaatcct
gtggatatcgtattaaacccacttggcgtaccatctcgtatgaacatcggtcaggtgcta
gaaacgcatctgggcatggcggcacgtggtttgggcgataggattaatgccatgttacgt
tcgcaagttgctgttggtgagcttcgtgaattcttagataagatttataatcaagtcggt
ggcgaacaggtggatttggacagtttgtccgatgaagacatcctagccatggctgataat
ttgcgtgctggtgtgccaatgggtacggctgtctttgatggtgccaaagaaactcaaatc
aaagagctgcttacgttggcaggacttgatgaatcaggtcagcaaacgctatatgatgga
cgtacaggtaagaaatttgaccgccctgttacggtcggctatatgtacatgcttaaattg
aaccacttggttgatgataaaatgcacgcccgttcaactggctcttattcactggtaacc
caacaaccattgggtggtaaagcacaatttggtggtcagcgttttggtgagatggaagtt
tgggcgttagaggcatatggtgcaacctacaccttacaagagatgcttactgtgaagtcg
gacgatgttgagggtcgtacacgcatgtataagaacatcgtcgatggtgaacaatacatg
aatcctggcatgccagaatcatttaacgtactgaccaaagaaattcgctctttgggtatt
aatattgacctaaaagagaaaaagtaa
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