Methylobacterium nodulans: Mnod_4141
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Entry
Mnod_4141 CDS
T00839
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mno
Methylobacterium nodulans
Pathway
mno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mnod_4141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mno03019
]
Mnod_4141
Messenger RNA biogenesis [BR:
mno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Mnod_4141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ACL59019
UniProt:
B8IUW1
LinkDB
All DBs
Position
4193609..4195279
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AA seq
556 aa
AA seq
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MAKGDELVFVPLGGVGEIGMNAALYGFGPPTARKWIMVDCGMGFASEEHMPGVDLMYPDL
SFIEQQRENLLGILITHGHEDHIGALVELWPRLKVPVYATGFTKSLIETRRLGEPGAPKI
DLREVRPNERMSFGPFEVEYVPVAHSIPEANALAIRTAHGLVVHTGDWKLDDAPVVGNVT
SEEVFTRLGEEGVLALVCDSTNVTREGRSPSEAEVAAHLAELIRSAPHRVAVTTFASNVA
RIRAVADAAQACGREVVAVGRAMDRVIDVARECGYLDGLPEFREPEAYGYLPREKVVALL
TGSQGEPRAALSRVSRDEHPEIALSPGDRVIFSSRAIPGNERAIGAIINDLVEAGVEVVT
DRTELVHVSGHPRRDELAAMYRWTKPRIAVPVHGEPLHLAEHATFARKQGVEDVVKARNG
TLIRLAPGAPQIIDHVSHGRLYKDGMVLITETDRALPERRKLSFTGIISVAIAIDQHGEM
KGEPAIDLMGLPTYGRNGEAIIDIVEDVVERTFGGLSRQKRRDSEAVENAVDRAIRAAVN
EVWGKKPACHVQVVEI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagggagatgaactcgtcttcgtgccgctcggcggcgtcggcgagatcgggatg
aatgcagcgctctacggattcggtccgccgacggcgcgcaaatggatcatggtcgattgc
ggcatgggcttcgcgagcgaggagcacatgccgggcgtcgacctgatgtatccggacctg
agcttcatcgagcaacagcgcgagaacctgctcggcatcctgatcacccacggtcacgag
gaccatatcggcgcgctagtcgagctgtggccccgcctgaaggtgccggtctacgcgacg
ggcttcaccaagagcctgatcgagacgcgtcgcctcggcgagccgggcgcgccgaagatc
gacctgcgcgaggtcaggccgaacgagcgcatgagcttcggtcccttcgaggtcgagtat
gtcccggtggcgcactcgatccccgaggcgaacgcgctggcgatccgcaccgcgcacggc
ctcgtggtgcatacgggcgactggaagctcgacgacgcgccggtcgtcggcaacgtcacc
tcggaggaggtgttcacccgcctcggcgaggagggcgtgctggcgctggtctgcgattcg
accaacgtcacccgcgagggccgctcgccgagcgaggccgaggtcgcggcccatctggcg
gagctcatccgctcggcgccgcaccgggtcgccgtcaccaccttcgcgtcgaacgtcgcc
cgcatccgggcggtggcggatgccgcgcaggcctgcgggcgcgaggtcgtggcggtcggg
cgcgccatggaccgcgtcatcgatgtcgcgcgcgaatgcggctatctcgacggcctgccc
gagttccgcgaacccgaggcctatggctatctgccgcgcgagaaggtggtggccctgctc
accggctcgcagggcgagccgcgcgcggctttgtcccgcgtctcccgcgacgagcatccg
gagatcgccctgtctcccggcgaccgggtgatcttctcgtcgcgggcgatccccggcaac
gagcgcgcgatcggggccatcatcaacgacctggtcgaggccggggtcgaggtcgtcacc
gaccgtacggaacttgtccacgtctcgggccatccgcgccgggacgaactcgccgccatg
tatcgctggacgaagccgcgcatcgccgtgccggtgcatggcgagccgctgcacctcgcc
gagcacgccaccttcgcgcgcaagcagggcgtcgaggacgtggtgaaggcccgcaacggc
accctgatccgcctcgcgccgggcgcgcctcagatcatcgaccatgtcagccacgggcgc
ctctacaaggacggcatggtgctgatcaccgagacggaccgggcgctgcccgagcgccgc
aagctctccttcacggggatcatctcggtggcgatcgccatcgatcagcatggggagatg
aagggcgagccggcgatcgacctcatgggcctgccgacctacggccggaacggcgaggcg
atcatcgacatcgtcgaggacgtggtggagcggaccttcggcgggttgtcgcgccagaag
cggcgcgattccgaggccgtcgagaacgccgtcgaccgcgcgatccgcgcggccgtcaac
gaggtctggggcaagaagcccgcctgccacgtccaggtggtggagatctga
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