Methylobacterium nodulans: Mnod_7234
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Entry
Mnod_7234 CDS
T00839
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mno
Methylobacterium nodulans
Pathway
mno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mnod_7234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mno03019
]
Mnod_7234
Enzymes [BR:
mno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mnod_7234
Messenger RNA biogenesis [BR:
mno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mnod_7234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ACL61973
UniProt:
B8ILJ8
LinkDB
All DBs
Position
complement(7326572..7328092)
Genome browser
AA seq
506 aa
AA seq
DB search
MTQFVDFGLAAPIMKALAETGYVTPTPIQAQAVPPAMTGRDLCGIAQTGTGKTAAFALPI
LHRLASETPAKRAPRRGCRVLVLSPTRELASQIADSFRDYGKFLPFSTTVVFGGVTIGRQ
ERALANGIDVLVATPGRLLDLVDRRSLSLDSVEYLVLDEADQMLDLGFIHALKRIVTLLP
KARQSLFFSATMPKNIATLAAQYLRDPVQVAVTPVATTAERVEQRVIHVSTGAKQALLGT
ILRDESIDRVLVFTRTKHGADRVVRGLEKVGIGSAAIHGNKSQPQRERALAAFRAGTCRV
LVATDIAARGIDVEGVTHVVNFDLPNVPEAYVHRIGRTARAGADGLAISFCNEEERAYLR
DIERLTRQKVPEMAIPVGFVPPSRQEAAEAVAEAERDRRQPGPRGQRPGRSHGARPQGGP
GGRPQGGRQHGQGGRPGEGRPRDGGRPAQEARPGRPAQDGRPAAHRAEGPKGHGRPQGQP
HRDRGRAPAQGGQDGRAIGWLDRAPR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
ttgacccagttcgttgatttcggcctcgcggcgccgatcatgaaggcgctcgccgagacc
ggctacgtcacgccgaccccgatccaggcgcaggcggtgccgcccgccatgaccggccgc
gatctctgcggcatcgcccagaccggcaccggcaagaccgccgccttcgcgctgccgatc
ctgcaccgcctcgccagcgagaccccggccaagcgcgccccgcgccgcggctgccgggtc
ctcgtcctctcgccgacccgcgagctcgccagccagatcgccgacagttttcgcgattac
ggcaagttcctgcccttcagcaccaccgtggtgttcggcggcgtcaccatcggccgccag
gagcgggcgctggcgaacggcatcgacgtcctggtcgcgaccccgggccggctcctcgac
ctcgtcgaccgccggtcgctgagcctcgactccgtcgagtacctcgtcctcgacgaggcc
gaccagatgctcgacctcggcttcatccacgcgctcaagcgcatcgtcaccctgctgccg
aaggcgcgccagagcctgttcttctcggccaccatgccgaagaacatcgcgaccctcgcg
gcgcagtacctgcgcgacccggtccaggtggcggtgacgcccgtcgccaccacggccgag
cgcgtcgagcagcgggtcatccacgtctcgaccggcgccaagcaggcgctgctcggcacg
atcctgcgcgacgaatcgatcgaccgggtgctggtcttcacccgcaccaagcacggcgcc
gaccgcgtcgtgcgaggtctggagaaggtcggcatcggctcggcggcgatccacggcaac
aagtcccagccccagcgcgagcgggcgctcgccgccttccgggccgggacctgccgggtg
ctcgtcgccaccgacatcgccgcccgcggcatcgacgtcgagggcgtcacccatgtggtg
aatttcgacctgccgaacgtgccggaggcctatgtccaccgcatcggccgcacggcccgc
gcaggcgcggacgggctcgccatctcgttctgcaacgaggaggagcgcgcgtatctccgc
gacatcgagcgcctgacccgccagaaggtgcccgagatggcgatccccgtgggcttcgtg
cccccgagccgccaggaggccgccgaggcggtagcggaggccgagcgcgaccggcgccag
cccgggccgcggggccagcgccccggccggtcgcacggcgcgcgtccgcagggcgggccc
ggcggtcgcccgcagggcgggcgccagcatggccagggcggacgccccggcgagggacgg
ccccgcgacggcggccgcccggcccaggaggcgcgtcccggccgtccggcgcaggatggg
cgcccggcggcgcaccgggccgagggcccgaagggccatggccggccgcaggggcagccg
caccgcgaccgcggccgggcccccgcccaaggcggccaggacggccgcgccatcggctgg
ctcgaccgcgcgccgcgctaa
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integrated database retrieval system
