Mustela nigripes (black-footed ferret): 131999070
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Entry
131999070 CDS
T09425
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mnp03036
]
131999070 (CHD2)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
131999070 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
131999070
NCBI-ProteinID:
XP_059227613
LinkDB
All DBs
Position
13:11347197..11468682
Genome browser
AA seq
1827 aa
AA seq
DB search
MMRNKDKSQEEDSSLHSNASSHSASEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESS
ESQSESESESAGSKSQPVLPEAKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPS
RFNIKEEASSGSESGSPKRRGQRQLKKQEKWKREPSEDEQEQGTSAESEPEQKKVKARRP
VPRRTVPKPRVKKQQKTQRGKRKRQDSSDDDDEDDEAPKRQTRRRAAKNVSYKEDDDFET
DSDDLIEMTGEGADEQQDNSETIEKVLDSRLGKKGATGASTTVYAIEANGDPSGDFDTEK
DEGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDV
EYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGL
PYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLGGE
NLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVV
PLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILL
KDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSLL
HFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVE
MSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQ
EVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGS
IKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR
AHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLENNSGRSNS
NPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLSQ
FKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKA
QTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGRPRSVRKDLVEGFTDAEIRRFI
KAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENASEGK
GPGKKRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLTCRVKAAHFDVE
WGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQTRADYLLKL
LRKSLEKKGAVTSGEEAKLKKRKPRVKKENKEPRLKDEHGVEFSSPRHSDNPSEEGEVKD
DGLEKSPMKKKQKKKENKENKEKQMSSRKDKEGDKERKKSKDKKEKPKGGDAKSSSKSKR
SQGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGLNVQEQLE
HTRNCLLKIGDRIAECLKAYSDQEHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRS
QEEEEQKKKDDVIGGKKPFRPEASGSSRDSLISQSHTPHNLHPQKPHLPASHGPQMHGHP
RDNYNHPNKRHFSNADRGDWQRERKFNYGGGNNPPWGSDRHHPYEQHWYKDHHYGDRRHV
DAHRSGSYRPNNLSRKRPYDQYSSDRDHRGHRDYYDRHHHDSKRRRSDEFRPQNYHQQDF
RRMSDHRPPMGYHGQGPSDHYRSFHTDKLGEYKQPLPPLHPAVSDPRSPPSQKSPHDSKS
PLDHRSPLERSLEQKNNPDYNWNVRKT
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaagaggaggacagttcgctacacagcaatgcatcg
agtcactcagcatctgaagaagcttccggttcagactcaggaagccagtcggagagtgag
cagggcagtgatccaggaagtggccatggcagtgagtcaaatagcagttctgagtcttca
gagagccagtcggaatctgaaagtgagtcggcaggttccaaatcccagccagtccttcca
gaagccaaagagaagccagcctctaagaaggaacggatagcggatgtgaagaagatgtgg
gaagaatatcctgatgtttatggggttaggaggtcaaaccgaagcagacaagaaccatca
cgatttaatattaaggaggaggcaagtagcgggtctgagagtgggagcccaaaaagaaga
ggccagaggcagctgaagaaacaagaaaaatggaaacgggaaccctcagaagatgaacag
gaacaaggcaccagtgcagagagcgaaccagagcaaaaaaaagtgaaagccagaagacct
gtccccagaagaacagtgcccaaacctcgtgttaaaaagcagcagaagactcagcgtgga
aagagaaaaaggcaggactcttccgatgacgatgatgaagatgacgaagctcctaaaagg
cagactcgtcgcagagcggctaaaaatgttagttacaaggaagacgatgactttgaaacc
gactccgacgacctcattgagatgactggagaaggagccgatgagcagcaggataatagt
gaaactattgaaaaggtcttagactcaaggctgggaaagaaaggagccactggagcttct
actactgtatatgcaatcgaagctaatggagaccctagtggtgactttgacactgaaaag
gatgaaggcgaagtccagtacctcatcaagtggaagggttggtcttacatccacagcaca
tgggagagcgaagaatccttacagcagcagaaagtgaagggcctaaaaaaattagagaac
ttcaagaagaaagaggatgaaatcaagcaatggttgggaaaagtctctcctgaagatgtg
gaatattttaactgccaacaagagctggcctcagagttgaacaaacagtatcagatagtt
gaaagagtaattgctgtgaagacaagcaagtctacactgggtcagacagattttccagct
catagtcggaagccggcaccttcaaatgaacctgaatatctatgcaaatggatgggattg
ccctattcagagtgtagctgggaagatgaagccttgattggcaagaagttccagagctgc
attgatagcttccatagtcggaacaactctaaaaccatcccgacaagagaatgcaaggcc
ttgaagcagagaccacggtttgtggctttaaagaaacaaccggcatatttaggaggggag
aatctggagctccgtgattatcagctagaaggcctcaactggcttgctcattcctggtgc
aaaagtaacagtgtaatccttgctgatgaaatgggcctaggaaagaccatccagaccata
tcattcctctcctacctgttccaccaacaccagctgtatggcccctttcttatagtcgtc
cctttatccaccctcacctcatggcagagggagtttgaaatctgggcaccagagattaac
gtagtggtttacataggtgacctgatgagcagaaatacgatacgggagtatgaatggatt
cattctcagactaaaaggctcaagttcaatgcacttataacaacatatgagatcctctta
aaagataagactgtgctgggcagtattaactgggcctttctgggagtggatgaagcccat
cggttgaagaatgatgactctttattgtataaaactctgattgatttcaagtcccaccat
aggctcctgattacggggacccctcttcagaattccctcaaagagctctggtccctgctg
cactttattatgccggagaagtttgaattctgggaagattttgaagaggaccatgggaaa
gggagggagaacggctaccagagcctccataaggtgctggagcccttcctgctccggagg
gtcaaaaaggacgtggagaaatcccttcctgccaaagtggaacagatcctcagggtggag
atgtctgctctgcagaagcagtattacaaatggattctgacccggaactacaaggctctt
gccaaagggacaagaggtagcacatccggtttcctgaatattgtgatggagttgaaaaag
tgctgtaaccactgctacctgatcaagccccccgaggagaacgagcgagagaatgggcag
gaggttcttctgtccctgatcaggagcagtgggaagctgattctgttagataaactgctg
acaagacttcgagaaagaggcaacagagtccttattttctcccagatggtcagaatgttg
gacatcctggccgagtacttgacgatcaagcactatcctttccagcgtctggatggttcc
atcaagggagaaatccgaaaacaggcactggaccacttcaatgcagatgggtctgaggac
ttctgtttcctgctctcgacaagggctggtggcctgggaatcaatctggcttcagcggac
acagttgtcatctttgactccgactggaacccccagaacgacttgcaggcacaagcccga
gcccatagaattggtcagaagaagcaggtaaatatttaccgcttggttacaaaggggact
gtggaggaggagatcatcgaacgggccaaaaagaagatggtattggaccatctggtgatt
cagcgtatggataccactggccggacggttctggaaaacaactcaggaaggtccaactca
aatccttttaataaagaagagctgacagctattttgaaatttggagcagaggatctcttc
aaagaactggaaggggaggagtcagagcctcaggaaatggacatagatgaaattttgcgc
ttggctgaaaccagagagaacgaagtgtcaacaagtgcaacagatgagcttctgtcacag
tttaaggttgccaacttcgcaacaatggaagacgaagaagagctggaagagcgtcctcac
aaggactgggatgagatcattccggaggagcagaggaaaaaagtagaggaggaagagcgt
cagaaggagctggaagaaatttacatgcttcctcgaattcggagttccactaaaaaggct
cagacaaatgacagtgactctgacactgagtctaagaggcaggcgcagagatcctctgcc
tctgagagcgagacggatgactctgatgatgacaagaagccgaagcgcagagggcgcccc
cgaagcgtgcggaaggaccttgtcgagggatttactgacgctgagatccgaaggttcatc
aaggcatataagaagtttggtctccctcttgaacggctggagtgcatagcacgagatgct
gagctggtagataagtctgtagcagatctgaaacgcctgggggaactgattcacaacagc
tgtgtgtccgccatgcaggagtatgaagagcagctgaaggaaaacgccagcgaggggaaa
ggaccagggaaaaagagaggcccaacaatcaaaatatcgggggtccaggttaatgtgaaa
tccattatacaacatgaggaagagtttgagatgctgcacaaatcgatccctgtggacccc
gaagaaaaaaaaaaatactgcttaacctgtcgagtgaaagctgcacattttgatgtggag
tggggggtggaggatgattcgcgactcctgctgggaatttatgaacatggctatggaaac
tgggagctaattaagacggacccagagcttaagttaactgacaaaattctgcccgtggag
acagataaaaagcctcaggggaagcagctgcagacccgagcggactacttgctcaagttg
ctcaggaaaagtctggagaagaagggggccgtgacgagcggggaagaggccaaattaaag
aagcggaagcctcgagtaaagaaggaaaacaaagaacccaggctgaaagatgagcatggg
gttgagttttcatctcctagacattcagacaatccgtcggaagagggagaagtaaaggat
gatggcttagagaaaagtccaatgaaaaagaaacagaagaagaaagagaacaaggagaac
aaggagaaacaaatgagttctaggaaggacaaagaaggggacaaggaaaggaagaagtca
aaagataagaaagagaagcctaaaggtggtgatgccaaatcttcaagtaaatcgaagcga
tctcagggtcctgtccatattacagcaggaagtgagcctgtccccattggagaggatgag
gatgatgatctggaccaggagacattcagcatatgcaaagagcggatgaggccagtgaaa
aaggctctgaagcagctggacaaacccgacaaggggctcaatgtgcaggaacagctagag
cacacccgaaactgcctgctgaagatcggagaccggatagccgagtgccttaaagcctat
tcagaccaggagcacatcaaactctggagaaggaacctatggatttttgtttccaagttt
acagaatttgatgctcgaaaattgcataagttatacaagatggctcataagaaaagatct
caagaagaggaggagcaaaagaagaaagatgatgtgattggtggaaagaagccgtttcgg
ccagaggcctcaggctccagccgggactccctgatctctcagtcccacaccccgcacaac
cttcaccctcagaagcctcacttgcccgcctcccatggcccacagatgcacggacaccca
cgagataactataatcaccccaacaagagacacttcagtaacgcagaccgaggagactgg
cagagggaaagaaagttcaactatggtggcggcaacaatcctccgtggggcagcgacagg
caccatccatacgagcagcactggtacaaggaccaccattacggcgaccggcggcacgtg
gacgcccaccgctctgggagctatagacccaacaacttgtccagaaagagaccttatgac
cagtacagcagtgaccgagaccacaggggacaccgagattactacgacaggcaccatcat
gactccaagcggaggagatccgatgaatttcggcctcaaaattatcaccagcaggatttc
cgacgaatgtctgaccaccgcccccctatgggctaccatggccaaggaccctcggaccat
taccgctctttccacacagacaaattgggggaatataaacagcccctgccccccctgcac
cccgcagtctcagaccctcgctcgcccccttctcagaaatctccccatgattccaagtca
cccctggatcacaggtctccattggagagatcactagaacagaaaaacaacccagattat
aactggaatgttcggaaaacataa
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integrated database retrieval system
