Mustela nigripes (black-footed ferret): 131999215
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Entry
131999215 CDS
T09425
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
131999215 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mnp04990
]
131999215 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
mnp04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
131999215 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
TSP1_CCN
ADAMTS_CR_3
TSP1_spondin
PLAC
Motif
Other DBs
NCBI-GeneID:
131999215
NCBI-ProteinID:
XP_059227935
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All DBs
Position
13:33531979..34089267
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AA seq
1017 aa
AA seq
DB search
MVSHFMGSFSVLGSFLLLGLQFVCPQPSTEHRKVPQRMAAAQGVPEDSGGGGGSPGVWGA
WGPWSACSRSCSGGVMEQTRPCLPSSYRARGALRPGAPPRAFAGHVVSAVRTSVPLHRSR
ERQELRAPVGPDASRQGLESRGSRHPQARARDPTAERRSRTRGPIGPGKYGYGKAPYILP
LQTDSAHSPQRLRRQRPSRSQGASGPSHGYSPPAHRAPQHGPLYQSDGGPRSGLQTSEAS
VYQLPLTHDPGFPAASSLFHGLESGSSHDPGVPRAAQSSSQPARSAAISCIGAYRQYKLC
NTNVCPESSRSIREVQCASYNNKPFMGRFYEWEPFAEVKGNRKCELNCQAMGYRFYVRQA
EKVIDGTPCDQNGTAICVSGQCKSIGCDDYLGSDKVVDKCGVCGGDNTGCQVVSGVFKHA
LTSLGYHRVVEIPQGATKINITEMHKSNNYLALRSRSGRSIINGNWAIDRPGRYEGGGTM
FTYKRPNEISSTAGESFLAEGPTNEILDVYMIHQQPNPGVHYEYVIMGTNAISPQVPPHR
RPGEPFNGQLGTDGRSQEEGAEKEGAEEKEDVHGGAPEVFTSESAQTFPVRHPDGFSSHR
PDNLVPAAPQPPRRSRDHNWKQLGTTECSTSCGKGSQFPIFRCVHRNTHEEVPESYCDSS
MKPTPEEEPCNLFPCPAFWDIGEWSECSKTCGLGMQHRQVLCRQVYANRSLTVQPYRCQH
LEKPETTSTCQLKICSEWQIRTDWTSCSVPCGVGQRTRDVKCVSNIGDVVDDEECNMKLR
PNDIENCDMGPCAKSWFLTEWSERCSAECGAGVRTRSVVCMTNHISSLPLEGCGNNRPAE
ATPCDNGPCTGKVEWFAGSWSQCSIECGSGTQQREVICVRKNADIFEVLDPYECSFLEKP
PSQQPCHLKPCGAKWFNTEWSMCSKSCQGGFRVREVRCLSDDMTISNLCDPQLKPEEKES
CNPQDCVPEVDENCKDRYYNCNVVVQARLCVYNYYKTACCASCTRVANRQAGFLGSR
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggtttctcatttcatggggtcgttcagtgtcctgggttccttcctgctgcttggactc
cagttcgtctgcccacagccctccactgaacacagaaaggtcccgcagcggatggcggcg
gcccagggcgtcccggaggacagcggcggcggcggcggctccccgggcgtgtggggcgcc
tggggaccctggtccgcctgctcgcgcagctgcagcggcggcgtgatggagcagacgcgg
ccctgcctgcccagctcgtaccgcgcgcggggggccctgcggcccggagctcccccgcgc
gccttcgcgggccacgtggtgtcggccgtgcgcacgtcggtgccgctgcaccggagccgc
gagcgccaggagctgcgcgcccctgtcggccccgatgccagccgccagggcctggagtcg
cggggcagccggcacccgcaggcgagggcccgcgaccccacggcggaaagaaggagcagg
acccgcggccccatcggccctggcaagtatggctacggtaaggccccgtacatcctgccg
ctgcagacggactccgcacactcaccgcagaggctccggaggcagaggccttccaggtcg
cagggggcatcgggtcccagccacggctacagcccgccggcccaccgggctccccagcac
gggcctctgtaccagagtgacgggggcccccgttctggactgcagacctccgaggcctcc
gtctaccagctgccattgacccatgacccaggcttccccgcagcttccagtctcttccat
ggcctggaaagcggcagcagccatgacccgggggtccccagggcagcacagagctcctca
cagcccgcccggtctgcagccatctcctgcatcggggcctaccgacagtacaagctgtgt
aacaccaatgtgtgtccagaaagcagtagaagcatccgggaagtccagtgcgcgtcctac
aacaacaagcccttcatgggccggttctatgaatgggagccgtttgcagaagtaaagggc
aaccggaagtgtgagttgaactgccaggcaatgggctaccgcttctacgtccgccaagct
gagaaggtcattgatggtaccccctgtgaccagaatggcacggccatctgcgtgtctggg
cagtgcaagagcattggctgtgacgactacctgggctcagacaaggtggtggacaaatgc
ggggtgtgcggcggcgacaacacaggctgtcaggttgtgtcgggcgtgttcaagcacgcc
cttaccagcctgggctaccaccgcgtggtcgagatcccccaaggagccaccaaaatcaac
atcaccgagatgcacaagagcaacaactatttggctttgcgaagtcgttccggccgctca
atcatcaacgggaactgggcgattgaccggccaggaaggtacgagggtggagggacaatg
ttcacctacaagcgtccgaatgagatttcgagcaccgctggagaatcctttctggctgaa
ggccccacgaatgagatcttggatgtctatatgatccaccagcagcccaatcccggagtc
cactatgagtatgtcatcatggggaccaacgccatcagcccgcaggtgcctcctcatagg
agaccaggggagcccttcaatggccagctgggaacagatgggaggagccaggaggaggga
gcagagaaagagggggccgaggagaaggaagatgtgcatggcggggcccccgaagtattc
acctcggaatcagcacagaccttcccagtcaggcatccagatggattttcctcccaccga
cccgacaatctggttccagcggccccgcagcccccaaggcgaagccgggaccacaactgg
aaacagctcgggaccacagaatgctccacgagttgtgggaaaggatcgcagttccctatt
tttcgctgtgtacacagaaacacccacgaagaggttcctgagagctactgcgactccagc
atgaagcctacccccgaggaggagccctgcaacctcttcccttgcccagccttctgggac
atcggagagtggtccgagtgcagcaaaacctgtggcctgggcatgcaacaccgccaggtc
ctgtgccgccaggtatacgccaaccgcagcctgacggtgcagccgtaccgctgccagcac
ctggagaagcccgagaccaccagcacctgccagctcaagatctgcagcgagtggcagatc
cggacggactggacctcgtgctcggtgccctgcggagtggggcagaggacccgagatgtg
aagtgcgtgagcaacatcggagacgtggtagacgacgaggaatgcaacatgaagctccgg
cccaacgacattgagaactgcgacatggggccctgtgccaagagctggttcctcaccgag
tggagtgaacggtgctcagcggagtgtggggctggagtgcggacacgctccgtggtgtgc
atgacgaaccacatcagcagcctgcccctggagggctgtgggaacaaccggcctgcggag
gccaccccttgtgacaatgggccctgcacgggcaaggtggagtggtttgcagggagctgg
agtcagtgttccatcgagtgtgggagtgggacccaacagagggaggtgatttgtgttagg
aagaatgcggacatctttgaagtcctggacccctatgaatgttccttcctggagaaaccc
cccagccagcaaccgtgccacctcaagccttgtggggccaaatggtttaacacagaatgg
agcatgtgctccaagagctgccagggtggcttccgggtccgcgaagtacgctgcctgtca
gatgacatgaccataagcaatctctgtgacccgcagttgaaaccagaagagaaagaatcc
tgtaaccctcaggactgtgtccctgaagttgatgaaaactgcaaggacaggtactacaac
tgcaacgtggtggtccaggcgcgactctgcgtctacaactactacaagaccgcctgttgt
gcctcctgcacccgcgtggccaacaggcaggcgggcttcctggggagcagataa
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