Mustela nigripes (black-footed ferret): 131999391
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Entry
131999391 CDS
T09425
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp00100
Steroid biosynthesis
mnp01100
Metabolic pathways
Module
mnp_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
131999391 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mnp01006
]
131999391 (FDFT1)
Enzymes [BR:
mnp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
131999391 (FDFT1)
Prenyltransferases [BR:
mnp01006
]
Terpene biosynthesis
Squalene/phytoene synthase
131999391 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
131999391
NCBI-ProteinID:
XP_059228116
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All DBs
Position
1:complement(117538451..117574194)
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AA seq
487 aa
AA seq
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MEEKLCSGPTIPMAVAACGTKAMCLFKRTFVLSPAAAPRGTGAGAGSPPRGCPLSSAAWP
SKDWPRGEGVCGWLRTPPAACRRPQSHSCSSASPTSVCLLCPQDSLSNSLKTCYKYLNQT
SRSFAAVIEALDGEMRHAVCIFYLVLRALDTLEDDMTISIEKKVPLLHNFHSYLYEPDWR
YMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIVDICQKMGFGMAEFLDKHVTSEQEWDK
YCHYVAGLVGIGLSRLFSASELEDPLVGEDTECANSMGLFLQKTNIIRDYLEDHREGREF
WPQEVWGKYVKKLGDFAKPQNIDSAVQCLNELITNALHHIPHVITYLSRLRNQSVFNFCA
IPQVMAIATLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIP
SSDPSSGKTRQIISTIRTQNLPNCQLISRSHYSPLYLSFVMLLAALSWQYLSTLSQVTED
YVQTGEH
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaactctgctcgggccccacgattcccatggccgtggcagcctgcggcacc
aaggccatgtgcctgttcaagcggacctttgtgctgagtccggccgctgcaccccggggc
acaggcgcgggcgccggctccccgccgcggggctgccccttgtcttccgccgcctggccc
tccaaggactggccgcggggggagggcgtctgcggctggctgcgcaccccgcctgcagcc
tgccgccggccgcagtcccactcctgctcctctgcatctcccacttcagtgtgtcttctc
tgtccccaggactcgctgagcaacagcttgaaaacttgctacaagtatctcaatcagacc
agtcgcagttttgcagctgtcattgaggcgctggatggggaaatgcgccatgcggtatgc
atattttatctggtcctccgagccctggacactctggaagatgacatgaccatcagtata
gaaaaaaaggttccactgctacacaattttcactcttacctttatgaaccagactggcgg
tatatggagagcaaggagaaggatcgacaagtgctagaggacttcccaacgatctccctc
gagtttagaaatttggctgagaaatatcaaacagtgattgttgacatttgccagaaaatg
ggatttgggatggcggagtttttggataaacacgtaacctctgaacaagaatgggacaag
tactgtcactatgttgccgggctggtgggaattggcctttcccgtctgttctcagcctca
gagttagaagaccccttagttggtgaagacacagaatgtgccaattctatgggcctgttt
ctgcagaaaacaaacatcattcgtgattatctggaagaccatcgagaaggaagagagttt
tggcctcaagaggtttggggcaagtatgttaagaagttgggcgattttgctaagccacag
aacattgactcggctgtgcagtgcctgaacgaacttataaccaacgcacttcaccacatc
ccacatgtcatcacttatctttcaagacttagaaaccaaagtgtgtttaacttctgtgct
attccacaggtgatggccattgccactctggctgcctgttacaacaatcagcaggtgttc
aaaggcgtagtgaagatccgaaaagggcaggcagtaactctaatgatggacgccaccaat
atgccagcggtcaaggctataatctaccagtacatggaagagatttatcatagaatcccc
agctcagacccatcttctggtaaaaccaggcagatcatctccaccatcaggacccagaat
cttcctaattgtcagctgatctcccgaagtcactactcccctctttacctgtcatttgtc
atgctgttggctgccctgagctggcagtacctgagcacgctgtcccaggtcacagaagac
tatgtgcagactggagaacactga
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