Mustela nigripes (black-footed ferret): 131999589
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Entry
131999589 CDS
T09425
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
131999589 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnp03400
]
131999589 (APEX1)
Enzymes [BR:
mnp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
131999589 (APEX1)
DNA repair and recombination proteins [BR:
mnp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
131999589 (APEX1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
131999589
NCBI-ProteinID:
XP_059228408
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All DBs
Position
13:complement(49846102..49849365)
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AA seq
317 aa
AA seq
DB search
MPKRGKKGAVVEDGEEPKIEPEAKKSKAGAKKNEKEAGEGPVLYEDPPDQKTSPNGKSAT
LKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPVELQELPGLSHQYWSA
PSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFDAFVLVTAYVPNAGRGLVR
LEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFG
ELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIR
SKALGSDHCPITLYLAL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgtgggaaaaagggagccgtggtagaagacggggaagaacccaagattgag
ccagaagccaagaaaagtaaggcgggagcaaagaaaaacgaaaaagaggcaggagagggg
ccagtcttgtatgaggaccccccagatcagaaaacctcgcccaatggtaaatcggccacc
ctcaagatctgctcctggaatgtggatgggcttcgagcctggattaagaagaaaggttta
gattgggtaaaggaagaagccccagatatcctctgcctccaagagaccaaatgttcagag
aacaaactaccagttgaacttcaagagttacctggactatcccatcagtactggtcagct
ccttcagacaaggaggggtacagtggtgtgggcctgctttcccgccagtgccccctgaaa
gtctcctatggcattggtgaagaggaacatgatcaggaaggccgagtgatcgtggctgaa
tttgatgcatttgtgctggtaacagcctatgtacctaatgcaggccgaggtctggtacgc
ttggagtaccggcagcgctgggatgaagcctttcgcaaattcctgaagggtttagcttcc
cgcaagccccttgtgctatgtggggacctcaatgtggctcatgaagaaatcgaccttcgc
aaccccaagggaaacaaaaagaatgctggcttcactccacaagagcgtcaaggctttggg
gaattactacaggccgtgccactggctgacagtttccggcacctctaccccaacacggcc
tatgcctataccttttggacctatatgatgaatgctcgatccaaaaatgtcggttggcgc
cttgattactttttgttgtctcactctctgttacctgcattgtgtgacagcaagatccgt
tccaaggccctgggtagtgaccactgtcctatcaccctatacttagcactgtga
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