Mustela nigripes (black-footed ferret): 131999644
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Entry
131999644 CDS
T09425
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04140
Autophagy - animal
mnp04148
Efferocytosis
mnp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131999644 (VPS18)
04148 Efferocytosis
131999644 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
131999644 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnp04131
]
131999644 (VPS18)
Membrane trafficking [BR:
mnp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
131999644 (VPS18)
Hops complex
131999644 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-C3HC4_2
zf-RING_16
zf-ANAPC11
KNOX2
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
131999644
NCBI-ProteinID:
XP_059228534
LinkDB
All DBs
Position
13:59794253..59803012
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AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCALEAERGPDGRGFVIATTRQRLFQFIGRAAEGAE
VQGFSGLFAAYADHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREAEFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLAGL
KPAERTQATLLTTWLTELYLSRLGALQGDPEALSLYRETRERFRSFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEAQQVSQATRYMEFCVNVLGETE
QAIHNYLLSLYARSQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEDDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNYHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPAPAKGSTRTKEAEAGAAAAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgaatacgaggactccctgtcccgctcagccgtcttgcagcct
ggctgccccagcgtgggcatcccccactccgggtatgtgaatgcccagctagagaaggaa
gtgcccattttcacgaagcagcgcattgactttaccccttctgagcgaattaccagtctt
gttgtctcctgcaatcagctctgcatgagcctgggcaaggatacactactccgcattgac
ctgggcaaggccaatgaacccaaccacgtggagctggggcgcaaggatgatgccaaggtt
cacaagatgtttctggaccacactggctctcacctgctgattgctctgagcagcactgag
gtcctctatgtgaaccgtaatgggcagaaggtacgaccactggcacgctggaaggggcag
ctggtggagagtgtgggctggaacaaggcactgggcaccgagagcagcacaggtcccatc
ctggtcggcaccgcccaaggccagatcttcgaagcggagctctcagccagcgagggtggg
cttttcggccctgcgccagacctctacttccgccccttgtacgtactcaacgaagaaggg
ggtccagctcctgtgtgtgcccttgaggccgagcgaggccctgatgggcgtggctttgtc
attgccaccacccggcagcgcctcttccagttcatagggcgagcggcggagggagccgag
gttcagggcttctctgggctctttgctgcatacgcggaccacccacccccattccgtgag
ttccccagcagtctgggctacagtgaattggccttctatacccccaagttgcgctctgca
ccgcgggccttcgcctggatgatgggggatggcgtgttgtatggagccctggactgcggg
cgtcccgattccctgctgagcgaggagcgagtctgggagtacccagagggggtcggtccg
ggagccagcccacccctggctatcgtcctgacccagttccatttcctgctgctgttggca
gaccgcgtggaggcggtgtgcacgctgacagggcaggtggtgctacgggatcacttcctg
gagaagtttgggcccctgaggcacatggtgaaggactcctccacaggccacctgtgggcc
tacaccgaaagggccgtcttccgctaccacgtgcagcgggaggcccgggacgtctggcgc
acctacctggacatgaaccgcttcgacttggccaaagagtactgtcgagagcggcctgac
tgcctggacactgtcctggcccgcgaggccgagttctgctttcgccagcgtcgttacctg
gagagcgcccgctgctatgccctgacccagagctactttgaggagattgccctgaagttc
ctggaggcccgtcaggaggaggccctggctgagttcctgcagcgaaaactggccggtctg
aagccagccgaacgcacccaggccacgctgcttaccacctggctcacggagctttacctg
agccgactcggggcgctgcagggtgatcctgaggctctgagcttataccgggagacccgg
gagcgcttccggtccttcctcagcagcccccgccacaaggagtggctcttcgccagccgg
gcctccatccacgagctgctggccagccacggggacacggagcacatggtgtacttcgct
gtgatcatgcaggattacgagcgcgtggtggcataccactgccagcacgaggcctacgag
gaggccctggctgttctcgctcgccaccgtgacccccagctcttctacaagttctcgccc
atcctcatccgtcacattcctcgccagctggtggacgcttggattgagatgggcagccgg
ttggatgcccggcagctcatccctgcgctggtgaactacagccagggtggcgaggcccag
caggtgagccaggccacccgatacatggagttctgcgtcaatgtgctcggggagacggag
caggcgattcacaattacctgctgtcgctgtatgcccgcagccagccggcctcgctgctg
gcatacctggagcaggcaggcgccagcccacaccgcgtgcattacgacctcaagtacgca
ctgcggctctgtgcagagcatggccaccaccgtgcctgcgttcacgtctacaaggtcctg
gagctgtacgaggaggctgtggacctggccctacaggtggatgtggacctggccaagcag
tgtgcggacttgccggaggatgacgaggagctgcgtaagaagctgtggctgaagatcgct
cggcacgtggtgcaggaggaggaggatgtgcagacggccatggcctgcctggccagctgc
cccctgctcaagatcgaggacgtgctgcccttctttccggactttgtcaccatcgaccac
ttcaaggaggccatctgcagctctctcaaggcctacaactaccacattcaggagctacag
cgggagatggaagaggccacagccagcgcccagcgtatccggcgagacctgcaggagctg
cggggccgctacggcacagtggagccccaggacaagtgtgccacctgcgacttccccctg
ctcaaccgccctttttaccttttcctctgcggccacatgttccatgctgactgcttgctg
caggccgtgcggcctggcctgccggcctacaagcaggcccggcttgaggagttgcagcgg
aagttgggagctgctccagcccctgccaagggctctacccgcaccaaggaagccgaggca
ggggctgccgcggcagggcctagtcgggaacagctcaaggctgacctcgatgaactggtg
gccgccgagtgcgtgtactgtggggagctgatgatccgctccattgaccggcccttcatt
gacccccagcgctatgaggaggagcacctcagctggctgtag
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