Mustela nigripes (black-footed ferret): 131999708 Help Entry 131999708         CDS       T09425                                  Symbol SPG11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism mnp  Mustela nigripes (black-footed ferret) Pathway mnp05014   Amyotrophic lateral sclerosis mnp05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:mnp00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     131999708 (SPG11)    05022 Pathways of neurodegeneration - multiple diseases     131999708 (SPG11)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:mnp03400]     131999708 (SPG11) DNA repair and recombination proteins [BR:mnp03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      131999708 (SPG11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  131999708 NCBI-ProteinID:  XP_059228702 LinkDB All DBs Position 13:complement(63087510..63172685) Genome browser AA seq 2444 aa AA seqDB search MATEKAARGAAACGTCSAKAMERVLPMLLVPVPVEATGRLGCRAQLHREQEVLGSLTAAG SLQVLSLAPGGRSGGACCLNGPFRHFVWEDSRNSSSPTDKPKLLALSESYELLIYEFDLK DGRCDATILYSCSEETLQKLIGDQNINISLLSLRILSFHNNTSLLFINKCIVLHIVFPER DAEIGVLNCFTLPLPTQAVDRIIDVQLCRGILFILSSLGWIYIFDTVDGTHVAHVDLALH QEDVCDEQQQEPAKISSFTSLKVSQDLDVVVIVSSSNSAIAVNLNLYFRQHPGHLLCERT LEDIPIEGPKGIDEDDPVNSDYNMKLTKFSFQVDRSWKAQLSSLNETIKSSKLEVSYCAP WFQNILHLESPESGNHNTSMLGWAFIPQDIMRSHYKFPQKDHANTNEPGRSWKIMNISEQ EEPVELTCMSVTGFSALFTWAVEGMGCTIGLWDLETQGMQCFSLGRKCIPIDASGDEQLC LVLTENGLSLILFGLTQEEFLNRLMIHGSASTVDSLCHLNGWGRCSIPIHALEAGIENRQ LDTVDFFLKSKENLLNPSSKSSVPDQLDDFPSYLYLRNVEKLIPALDLLCSAIRESDSET QSKHFSEQLLNLTLSFLNKQIKELFVHNEELDEHLQKGVNILTSYINELRTFMIKFPWKT IDTVDDYDVNENIPKVRESSMWEKLSIEEVIASAVLDNKIPEAQTFFRINNHSAQRLEEL IRIGLNLVFDNLKRNNIKEASELLKNMGFDVKDQLLKICFYTTDTNIRDFLVEILKEKNY ISENEKRTIDFVHQVEKFYSGQFQENVQIQSFARYWIKEQDFFKHKSVLDSLLKYDPKDK CNKQDHKVVLNWAQWWNQLTQESILLPRISPEEYKSYSPEALWSYLTARHDWSSVILWIG EFQTQNSCALLEKNRWPLLTVDVIDRHTCCSSYMRNEILDQLARNGIFLESELEDFELLL LRLTRIGGVMQDAVPVQNYRAQEGWDFHSHFILYCLEHGLQYLLYVYLDCYKLSPSNCPF LEKKELHEAYPWFEFLVQCRQVSSNLTDPKLIFHASLANAQILIPSNQASVSSMLLEGHT LLALATTMYAPGGVSQVVQNDENETCLKKVDPQLLKMALTPYPKLKTALFPQYTASNVLP PDITLYHLIQSLLPFDPSRLFGWQCANTLAIGDAVSHLPHFSSPDLVNKYAIVERLNFAY YLQHGRPSFAFGTFLVQELTKSKTPKQLIQQVGNEAYVLGLSSFYVPSVGAACVCFLELL GLDSLKLRVDMKVANIILSCKCRNEDARSSYIRESLAEKLSKLAVGEKATIEELLILLEE GIWNSIQQQEIKRLSSESSSQWALAVQFCRLHNVKLSTSYLRECAEANDWLQFIIHSQLH NYHPEEVKSLLQYFSPVLQDHLRLAFENLTSVSNSKMDSDPVCNRVPQELQRNKEEMTDL FEVLLQCSEEPDSWCWLLAEAVKQRAPILSVLASCLQDASTIPCLCVWIVTSVEDTVAAE ATEHIQGSMEEHIWDLQDLSVIWRTLLTRQKSKTLIRGFQLFFKDSPLLLMMEMYELCMF FKNYKEAEAKLLEFQKSFETVETAATGVHATIPAPWLKEHVCFLLKLMLQQCGTQYELGK LLQLFVGIENLFSDGPDVKKLFVLSQILKDTSIAINHVIISSYSLENFQHECKSILEKLE TEGRFALARRVAELAELPVDNLVIEEITQEMQTLQHTDQWALKQARIDFWTKCHENFKKN AISSRAAASFFSAQAQESPEAPGEGGPPGLEERRLLLTLAAHWLAQEAPGPEEELEELEK QIWHCRISQHALREKQEDAEPRFPQHISTSGEPSFDSVAHKFSLSMLAALNTAKYLELNG LPPKETCESRLDWKEQESLNSLIGRLLDDGCVHEASRVCRYFHFYNQDVTLVLHCRALAA GEASVDGLHPEIRAILQSTQRLEEEEPGTPLRRVQSTSSLDSQSFVMLPPSDEVVTNLET LTSKCLHGKNYCRQVLCLYELAKELGCSYTDVATQDGETMLRAILASRQPDRCRRAQAFI STQGLEPDTVAELVAEEVTRELLTPSEGTGQKQMFAPAEESQTFLQLTTLCQDRTLIGMK LLDKISSVPHGELSCTAELLILAHHCFTLTCHMEGIIRVLQAARLLTDKHLAPSEEYGLM VRLLTGIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHN MIALCFSMCREIGENHEAAACIQLKLIESQPWEDSLKDGQHLKLLLLKALTLMVDAAESY AKDSCVRQALHCHRLTKLITLQIHFLNTGQNTMLINLGRHRLMDCLMALPRFYQASIVAE AYDFVPNWAEILYQRVILKGDFNYLEEFKQQRLLRSSIFEEISKKYKQHQLADTAVKNLK KLLTYCEDVYLYYKLAYEHKFFDIVNVLLKDPQTGCCLKDMLAG NT seq 7335 nt NT seq  +upstreamnt  +downstreamnt atggctacagaaaaggcggccaggggagctgcggcttgcggcacctgcagcgctaaagcc atggagcgggttctacctatgctgttggtgccagttcctgtggaggcaacggggcgcctg ggatgccgggcgcagttgcacagagagcaggaggttctggggagcctgaccgctgcaggc agcctgcaagtgctttccttggcgccgggcggccggagcgggggtgcctgctgccttaat ggcccctttcggcactttgtatgggaggattctcgtaacagcagctcaccaacagacaaa cccaaactgcttgctcttagtgaaagttatgaactgttaatctatgaatttgatttgaaa gacggaagatgtgatgcaaccattttgtatagctgtagtgaggagactttgcaaaagctc attggagatcaaaatatcaatatttctttattatctttgagaatcctgtcatttcacaat aacacatcactattgttcatcaacaagtgtattgtcctacacattgtatttcctgaaaga gatgctgagattggagtactcaactgtttcacgttacccttgcctacacaagcagtggac aggattattgacgtgcagctctgcagaggaattctttttattttgagtagtttaggttgg atctacatttttgacactgtggatggtacacacgtagcccatgtggatttagcacttcac caagaagatgtgtgtgatgagcaacagcaggaaccagccaagatttcttccttcacttca ctgaaagtgtctcaagacctagatgttgtagtgattgtcagctcctccaactctgcaatt gctgtgaacttaaatttgtatttcaggcaacacccaggacacctactatgtgaaagaact ctagaagacattcctattgaaggccccaaggggattgatgaagatgatcctgttaattct gactacaacatgaaactgaccaagttttcctttcaagttgataggtcttggaaagcccag ctgtcatcactgaatgaaacaataaagagctccaaactggaggtttcttattgtgctcca tggttccagaatattttgcatttggagtcccctgaatctggtaaccacaataccagtatg ctaggctgggccttcattccacaggacataatgcgcagccactataagtttccacagaag gatcatgccaataccaatgaaccagggagatcatggaaaatcatgaacattagtgaacaa gaggaacctgttgagcttacttgtatgtctgtgacaggattcagtgcactgtttacctgg gcagtggaaggaatgggctgcaccattggcctttgggatttggagacccagggtatgcag tgtttctcccttggcagaaagtgtattcctatagacgctagtggagacgagcagctatgc cttgtcttgacagaaaatggactttctctgattttgtttggattgactcaagaggagttt ttaaatagactaatgatccatggaagtgccagcactgtggactctctttgccatctcaat ggttgggggaggtgttcaatccccatacatgcactggaggctggaatagaaaatcgtcaa ctggacacagtagatttctttttgaagagcaaagaaaatcttttgaatccatcctcaaaa tcttctgtacctgatcagcttgatgacttcccatcttatttgtatttaagaaatgtggaa aaactgataccagcattggatttactttgctcagcaattagagaaagtgattctgaaacc caaagcaaacacttttcagaacagttgcttaatcttacactgtcttttcttaacaaacaa ataaaggagctttttgttcacaatgaagaactagatgaacatctacaaaaaggagtgaac attttgaccagctacattaatgaacttcgaaccttcatgataaagtttccttggaagaca atagatacagtagatgattatgacgtaaatgaaaatattcccaaagtaagagagagcagt atgtgggagaaactcagcattgaggaagttattgccagtgctgttttagacaacaaaata ccagaggcacagactttcttcaggattaacaatcattctgctcaaagacttgaggagctg attagaataggcctaaatttggtctttgacaatttgaaaaggaacaatataaaggaagcc tctgagcttttgaagaacatgggctttgatgtaaaagaccagttgctcaagatatgcttc tatacaactgatacaaatatacgggactttctggttgaaattttaaaagaaaaaaattat atttctgaaaatgaaaaaagaactatagacttcgtgcatcaagttgagaagttttattca ggacaattccaagaaaatgtacagatccagtcctttgccaggtattggataaaggaacag gattttttcaagcataaatctgttttggactcactcctgaaatatgatcctaaagataaa tgtaacaaacaggaccataaagttgtattaaattgggctcagtggtggaatcaactaacc caagaatccatccttctccccaggataagtccagaagaatacaaatcatattctcccgaa gccctctggagctatctcacggctcgccatgactggtcaagcgttatcttgtggattgga gaatttcagactcagaacagttgtgctttgcttgagaagaacagatggccccttctgact gttgatgttatcgatcggcatacttgctgcagcagttacatgaggaatgaaattttagat cagctggccaggaatgggatttttcttgaatctgaactagaagactttgaactcttgctg ctaagactgacccgcattgggggtgtgatgcaagacgctgtccctgttcagaactacaga gcccaagaaggctgggatttccattctcacttcattctctattgtttggaacacggtctg cagtatcttctctatgtgtatctggactgttacaaacttagtccttcaaattgtcccttt ttggaaaaaaaagaattacatgaagcttacccttggtttgaatttttagttcaatgtcga caagtttccagtaatttaacagatcccaaactgatcttccatgctagccttgcaaatgct cagatactgattcccagcaaccaggccagtgtaagcagtatgctattggaaggacatact ctcctggcccttgctaccacaatgtatgcccctgggggggtcagccaggttgttcagaat gatgaaaatgagacctgtttgaagaaagtagatccccagttactgaagatggcattaact ccttaccccaagctaaaaactgctctcttcccacagtacaccgcctctaatgttctgcca cctgatattacactttaccaccttattcagtcactgttgccctttgaccctagcagattg tttggctggcagtgtgccaacacgctggctataggagatgcagtgagtcatctcccacat ttttctagccctgacctggttaataaatatgctatagtggaacgtctgaattttgcatat tatttacaacatggacgaccatcatttgcatttggtacttttctggtccaggaattaacc aagagcaagactcccaagcagctgatccagcaagtaggtaatgaagcctatgttttaggg ctctcctccttctacgtaccttcagtaggagctgcctgtgtttgtttcttagaactactt ggccttgacagtctcaagctcagagttgatatgaaagtggccaatataattctgagctgc aagtgtagaaacgaagatgctcggtccagctatatcagagagtctctagctgaaaaacta tctaaactggctgtgggtgaaaaggccaccatagaggaattgcttattctcttagaagaa gggatatggaacagtatccagcagcaggaaataaagaggttatctagtgaatctagcagc cagtgggcattagcagtacagttctgcaggcttcacaatgtgaaactgagcacatcttac ctcagagaatgtgccgaagcaaacgactggttacagttcattatccatagccagctccat aactatcacccagaggaggtgaaatctctccttcagtatttcagtcctgtccttcaagac catttaagactggcttttgagaacttgacctcagtgtctaactccaaaatggacagtgat ccagtctgcaacagggtcccccaggaactccagagaaacaaagaagagatgactgattta tttgaggttctgctccagtgctcagaggaaccagactcctggtgctggctcctcgctgaa gcagtgaaacaacgggcccctatccttagtgtcctggcctcctgtctccaggatgccagt actattccttgtctctgtgtttggatcgtcacatctgtggaggacactgttgctgctgaa gcaacagaacacattcagggctcaatggaagagcacatatgggaccttcaagacctctcg gtcatctggagaacattactaacaaggcagaagagcaaaactctcatcagaggttttcaa cttttctttaaggattccccactactgttgatgatggagatgtatgaactgtgtatgttt ttcaagaattataaggaagccgaagctaaacttctggagttccaaaagagctttgaaact gttgaaacagcagccacaggggtccacgctaccatccctgccccatggctgaaggagcac gtgtgttttcttctgaagcttatgctgcagcagtgtgggacccagtatgaactggggaag ttgttacagctctttgttggaatagaaaatctcttctctgatggtccagatgtgaagaag ctctttgtccttagccaaattttaaaggacacatccatagccattaatcatgtaattatt agcagctacagccttgagaatttccagcacgaatgtaaatctattttggaaaaattggag acagagggacggtttgctttggccagaagagtagcagaattagcagaactacctgtggac aacttggttattgaagagataacacaggaaatgcagaccttacaacacaccgaccagtgg gccctgaaacaagcaagaattgacttctggacaaagtgtcatgagaattttaagaaaaat gccatttcaagcagagcagctgcttcctttttctcagctcaggcccaggagtcccctgag gccccaggggaggggggaccgcctggcctggaggagcgccgtctgctgctcacactggcg gctcactggcttgctcaggaggccccagggcctgaggaggagctggaggagctggagaag cagatctggcactgccgcatttcccagcatgccctcagagagaaacaggaggacgcagag cccaggtttcctcagcacatctcaactagtggggagccatcctttgatagtgtagcccac aagttttccctctccatgttggctgctctgaacacagcaaaatatttagaacttaatggc cttccacccaaagagacttgtgagagcagactggattggaaggagcaggagtcccttaac tctctgattgggcgcctattggatgatggctgtgtccatgaagcaagtagagtgtgtcgg tattttcatttctacaatcaagatgtcaccttggtgttgcactgcagagcactggctgcc ggggaagctagtgtggatggcctgcacccagagatccgtgctatcctccaaagcacccag cggcttgaggaagaagaacctggcactccactaagaagagtccaaagcacttcgagtttg gatagtcagtcgtttgtgatgctgccccccagtgatgaagtggtgacaaatctggaaact ctgacaagcaaatgcctccatgggaagaactactgccggcaggtcctctgtctgtatgaa cttgccaaggagttgggctgttcctacacagacgtggccactcaggatggtgagaccatg ctccgggctatcttggcctctcggcagccggaccgatgcaggcgcgcccaggctttcatc agcacccagggcctcgagccagataccgtggctgaacttgtggctgaagaggtgacccga gagctactgaccccgtcagagggaacaggacagaagcagatgttcgctccagcagaggaa agccagacatttcttcagctgaccactctgtgtcaagatcgcacgttgataggcatgaag ctgttggacaagatttcctctgttccccacggggaactgtcttgcactgcggagctgctg atcctggcccatcactgcttcacgctcacgtgccacatggagggcatcatccgggtcctg caagctgcccggctgctcacagacaaacacttggcccccagtgaggagtacgggctgatg gtgcgcctcctcactggcatcggaaggtacaacgagatgacctacatatttgacctgctg cataaaaagcactacttcgaagtactgatgaggaagaagttggatccgagtggcaccctg aagacggcccttctggactacatcaaacgttgccgccctggggacagtgagaagcacaac atgatcgctctgtgcttcagcatgtgtcgggagattggggagaaccatgaggcggctgcc tgcatccagctgaaattgatcgagtcccagccctgggaggacagcctcaaggatgggcag cacctgaagctgctgctgctgaaagccctgaccctgatggtggacgcggcggagagttac gccaaggactcctgtgtgcgacaggccctgcactgtcaccggctcaccaagttgataaca ctgcagattcactttctgaacacgggccagaacacgatgctcatcaacctgggccgccac cggctgatggactgtctcatggctctacctcggttctaccaggcttctattgtggccgag gcctatgactttgttcccaattgggcagaaatcctctaccaacgagtgattcttaaagga gattttaattacctggaagaatttaagcagcaaaggctattaagatctagtatatttgaa gagatttccaaaaaatacaaacaacatcaactggctgacacagctgtgaaaaacctgaag aagttactcacatactgtgaagatgtctacctatattacaagctcgcatacgaacacaaa ttttttgacattgtaaatgtgctgctgaaggaccctcagactggctgctgtctgaaggac atgctagcaggttag

DBGET integrated database retrieval system