Mustela nigripes (black-footed ferret): 131999767
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Entry
131999767 CDS
T09425
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
131999767 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
131999767 (MYO5C)
04131 Membrane trafficking [BR:
mnp04131
]
131999767 (MYO5C)
03029 Mitochondrial biogenesis [BR:
mnp03029
]
131999767 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mnp04812
]
131999767 (MYO5C)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
131999767 (MYO5C)
mRNA cycle factors
P-body specific factors
131999767 (MYO5C)
Membrane trafficking [BR:
mnp04131
]
Others
Actin-binding proteins
Myosins
131999767 (MYO5C)
Mitochondrial biogenesis [BR:
mnp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
131999767 (MYO5C)
Cytoskeleton proteins [BR:
mnp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
131999767 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Csm1_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
131999767
NCBI-ProteinID:
XP_059228825
LinkDB
All DBs
Position
13:complement(69861724..69953315)
Genome browser
AA seq
1742 aa
AA seq
DB search
MAVAALYTQYNRVWIPDPEEVWKSAEIAKDYRVGDKVLRLLLEDGTELDYSVDPESLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRVRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNTHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTRMGGSTVIEGVNDR
ADMVETRKTFTLLGFKEDFQMDIFKILAAILHLGNVQITAVGHERSSVSEEDRHLKVFCE
LLGLERAKVAQWLCSRRIVTTSETVVKPMTRPQAVTARDALAKKIYAHLFDFIVERINQA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSFFEKPR
MSSASFIIQHFADKVEYKCEGFLEKNRDTVYDMLVEIMRASKFQLCASFFQESAVPPSPF
RSAITVKSAKPVIKPNNKQFRTTVGNKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSRRIAQQLRACGVLETIRISAQSYPSRWTYTEFYSRYGVLMTKQELSFRDKKEVCKVV
LHRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQSCVVIQKHIRGWLQRKKFLRER
QAALTIQQYFRGQQTVRKAVTATALKEAWAAIIIQKYCRGYLVRSLYQLIRVAAITIQAY
TRGLLARRRYRKMLEEHKAVILQKYARAWLARRRFQSIRRFVLNIQLTYRVQHLQKKLED
QNKENHGLVEKLTSLAALRAGDTEKIQKLESELDKAAAHRHSYEEKGKKYKAAMEEKLAK
LQKHNSELEIQKEQIELQLQEKTEELKEKMDDLTKQLFDDVQKEQEQRILLEKSFELKTQ
DYEKQIWSLKEDIQALRAEKTHLQHQLEEERVTSDGLKGEVAQLRKQAKTISEFEKEIEL
LQTQKIDVEKHVQSQKREMREKMSEITKQLLESYDIEDVRSRLSLEDLEHLNEDGELWFA
YEGLKKATHVLESHFQSQKDSYEKEIEALNFKVVHLSQEINHLQKLFREETDINESIRHE
VTRLTSENMMIPDFKQQISELEKQKHDLEIRLNEQTESMKGRLEELSNQLNRNREEEGTQ
RETLEAQNEIHTKEKEKLISKIQEMQEASEHWKKRFETESEVRSTFRQEASRLTMENRDL
EEELDMKDRVIKKLQDQVKTLTKTIEKGNDGHLSSGPREYLGMLEYKMEDEDKLIQNLIL
DLKPRGVVVNMIPGLPAHILFMCVRYADSRNDAGMVKSLMNSTINGIKQVVKEHVNDFEM
LSFWLSNTCHFLNCLKQYSGEEEFMKLNSPHQNKNCLNNFDLSEYRQILSDVAIRIYHQF
IVVMENNIQPIIVQGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSVLQQLSYFYS
TMCQNGLDPELVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDK
NLQNSLAKETLEPLSQAAWLLQVKKTTDSDAKEIYERCTSLSAVQIIKILNSYTPIDDFE
KRVTPSFVRKVQALLNNRADSSQLMLDTKYLFQVTFPFTPSPHALEMIQIPSSFKLGFLN
RL
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggccgcgctgtacacgcagtacaacagggtatggattcctgatcctgaagaa
gtttggaagtctgctgaaatagcaaaagactacagagttggtgacaaagtcctgagactc
ttgctggaggatggaacggagctggattattctgttgatccggaatccctgcctccgctt
cggaaccctgacatcctcgtgggcgagaatgacctcacggccctcagctatctccacgag
cccgcggtgctccacaatctcagagtccgcttcgcagaatccaaactcatttacacctac
agcggaatcattttggtggccatgaatccttacaagcagttgccgatctacggagatgcc
atcatccacgcctacagcgggcagaacatgggtgatatggacccacatatatttgccgtg
gctgaagaggcatacaagcagatggccagaaacaataaaaatcagtcaataattgtaagt
ggggagtcaggtgccgggaagactgtgtccgctcgctacgccatgaggtattttgccacc
gtcagcaagtccagcagtaacacccacgtggaggacaaggttctggcgtcaaaccccata
acagaggcggtgggaaatgccaagacgacccgcaatgacaacagcagtcggtttgggaaa
tacacagagatcagctttgacgagaggaatcagattataggagccaacatgaggacgtac
ctgctggagaaatccagagtcgtctttcagtcggaaaatgaacgaaattaccacattttt
tatcagctttgtgcatctgcccagcagtcggaatttaaacatcttaaattggggagtgca
gaagaatttaactacacaagaatgggaggcagcacagtcatcgagggcgtgaatgacagg
gcagacatggtggagacacggaagaccttcacgctgctgggtttcaaggaggattttcag
atggacatttttaagatcctagcggccatcctacatctgggcaacgtgcagatcacagcg
gttggccacgagaggtcttctgtcagtgaggaggacaggcacctgaaggtgttctgcgag
ctcctgggcctggagagggccaaagttgcccagtggctctgcagtcgcagaattgttaca
acctccgagacagtggtgaagcccatgaccaggccccaggcagtcaccgctagggacgca
ctggccaagaagatctacgctcacctgtttgacttcattgtggagagaattaaccaagcg
ttgcagttttcaggcaagcagcacacttttattggtgttttggacatttatggttttgaa
acctttgatgtgaacagctttgaacagttttgcatcaattatgctaatgagaagctgcaa
cagcagtttaacctgcatgtctttaaacttgaacaagaagaatacatgaaggaagatatc
ccttggactctgatagatttttatgacaaccaaccagttattgacctgatcgaagccaaa
atgggaattttggagttactggatgaagaatgcttgttaccacatggaactgatgaaaac
tggcttcaaaagctgtataataattttgtcaacaagaactctttctttgagaaacccagg
atgtcaagtgcatccttcatcatccagcactttgctgacaaggtagaatataaatgtgaa
ggtttccttgaaaagaacagagataccgtctatgacatgctggttgaaatcatgagagcg
agcaagttccagctctgcgccagcttttttcaagaaagtgcggttcctccttcccctttc
aggtcagcgatcacagttaaatctgcaaagccagtcatcaagccaaacaacaagcagttc
cggaccacagtggggaacaagttccgcagctctctgtatttgctcatggaaaccctcaat
gcgaccacaccccactatgtgcgatgcatcaagccaaatgatgagaaattaccctttgag
ttcgactccagaaggattgctcagcagctgcgagcctgcggcgtcttagagacgattcgc
atcagtgcgcagagctacccatccaggtggacgtacaccgaattctatagtcgctatggt
gtgctcatgaccaaacaggagctttcgttccgtgataaaaaggaggtgtgcaaagtggtt
ttacacaggctcatccaggattctaatcagtaccagtttggtaaaaccaaaattttcttc
agagcaggacaagtggcctatttagagaaactccgactggataagctcaggcagagttgt
gttgtgatacaaaagcacatccgtggctggctccagagaaaaaagttcctccgagaaaga
caagctgctctgaccatccagcagtacttccggggtcagcagaccgtgaggaaagctgtt
acggcaacagccttgaaagaagcatgggccgccatcatcattcagaagtactgtcgtggg
tatcttgtccgcagtttgtaccagctgatccgtgtggctgccatcaccatccaggcctac
acccgaggactcctggcaaggaggagataccgaaagatgctggaggaacacaaggctgtg
atcctacagaaatacgcacgggcatggctggcccgacgcagattccagagtatccgacga
tttgtgctcaacattcagctcacttacagggtccagcatttgcagaaaaagctagaagat
cagaacaaagagaaccatgggctggtagagaagctgaccagcctcgccgctcttcgggcc
ggtgacacggagaagattcagaaactggaatccgagctggacaaagcagctgcccacagg
cacagttatgaggagaaggggaagaaatataaggctgccatggaagagaaactggcgaag
cttcagaagcataactcagaactggaaatacaaaaggagcaaatagagctgcagcttcaa
gagaagactgaagagctgaaagaaaagatggacgacctcaccaagcagctctttgatgat
gtgcaaaaagagcaagaacagagaatacttcttgaaaaaagttttgaactgaaaacacaa
gactacgagaagcagatctggtctttgaaagaagacattcaagctctcagagcggagaaa
acgcacctgcagcaccagctagaggaagaacgggtcacctccgatggcttaaagggggag
gtggcccaactgagaaagcaggcaaagacaatctctgagtttgaaaaggagatagagcta
cttcagacacagaagatagatgtggagaaacacgtgcagtcacagaaacgggaaatgaga
gaaaagatgtccgagatcaccaaacaacttcttgaaagttacgacattgaagatgttaga
agcaggctctcgttggaagatttggaacatttaaatgaggatggagaactttggtttgct
tatgaaggactaaagaaagcaacacacgtgttggagagccatttccagtcccagaaggac
tcctatgaaaaggagatcgaagctttgaacttcaaagtggtgcacctaagtcaagagatc
aaccacctgcagaaattatttagagaagagactgacatcaatgaaagtatccgtcatgaa
gtcaccaggctaacatcggagaacatgatgatcccagactttaaacagcagatttcagaa
ctggagaaacagaagcatgatctggaaatccgcctgaatgaacaaacggaaagcatgaaa
ggcagactggaagaattgtctaatcagttgaaccgcaatcgagaagaagaaggaacacaa
agagagaccctagaggcccaaaatgaaatacacaccaaagagaaagagaagctgatcagt
aagatacaagaaatgcaggaggccagcgagcactggaagaaacgatttgaaactgagagt
gaagtcaggagtaccttccggcaggaagcgtctcgtctaactatggaaaacagagatctt
gaagaagagttagacatgaaggacagagtgattaaaaagctacaagatcaagtcaagact
ctaaccaagacgattgaaaagggcaatgatggccacttgtcctcaggacccagggagtac
cttggaatgctggagtacaagatggaagatgaggacaagctcatccaaaacctcattctt
gacttgaagccccgtggcgtggtggtgaacatgatcccagggctcccggctcacatcctg
ttcatgtgtgtgcgctacgcggactctcggaatgatgccggtatggtcaagtccctcatg
aacagcaccatcaatggcatcaagcaggtggttaaggaacatgtaaacgattttgagatg
ctgtctttttggctttccaatacgtgtcatttcctcaactgcctgaagcagtacagtgga
gaagaggaattcatgaagcttaatagtccacatcagaataagaattgcttgaacaacttt
gacctctcagaatacagacagattcttagtgatgtggcgatacgaatctatcatcagttc
attgttgtaatggaaaacaacattcaaccaataatagtgcagggcatgctggaatacgag
agcctgcagggcatttctggcctgaagcccaccggcttccggaagcggtcctccagcata
gatgacacggacgcctacacgatgacctccgtcctgcagcagctgagctacttctacagc
accatgtgccagaatggcctggaccctgagctggtgaggcaggctgtgaagcagctcttc
ttcttgatcggggccgtcaccctgaacagcctcttcctgcgcaaagacatgtgctcctgc
agaaaagggatgcagatcaggtgcaacatcagctacttagaagaatggcttaaagataag
aatttgcagaacagcttggccaaggaaactttggaacctctctctcaggcagcctggttg
cttcaggtcaagaagaccacagacagcgatgccaaggagatctatgaacgctgtacctca
ctgtctgctgtgcagatcataaagatccttaattcatacacacctatagatgactttgaa
aaaagagtgactccatcttttgttcgtaaagtacaggctctcctaaataaccgggcggat
tcatcccagctgatgttggatacaaaatatctctttcaagttacatttccttttaccccc
tctccacatgctctggaaatgattcagatccccagcagttttaagctaggctttctcaat
aggttatag
DBGET
integrated database retrieval system
