Mustela nigripes (black-footed ferret): 131999883
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Entry
131999883 CDS
T09425
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131999883 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnp03021
]
131999883 (SMARCA5)
03036 Chromosome and associated proteins [BR:
mnp03036
]
131999883 (SMARCA5)
Transcription machinery [BR:
mnp03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
131999883 (SMARCA5)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
131999883 (SMARCA5)
RSF complex
131999883 (SMARCA5)
WICH complex
131999883 (SMARCA5)
B-WICH complex
131999883 (SMARCA5)
NORC complex
131999883 (SMARCA5)
BRF complex
131999883 (SMARCA5)
NuRF complex (fruit fly)
131999883 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
131999883
NCBI-ProteinID:
XP_059229062
LinkDB
All DBs
Position
1:123030084..123070756
Genome browser
AA seq
1052 aa
AA seq
DB search
MSSAAEPPPPPPPESAPSKPAASAASSVSNSSNKGGPEGVAAQAASSAAGSGPADSEMEE
VFDDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKM
KPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKL
RDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKST
LHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKF
NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFN
SADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ
REWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVT
NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQE
SINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTK
TVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATH
VFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYR
EKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPR
LFELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQ
GFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKI
MAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLH
KLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEK
AEKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcggccgagcctccgccacccccgcctcccgagagcgcgccttccaagccc
gcagcctcggccgccagcagcgtgagcaacagcagcaacaaaggcggcccggagggcgtc
gcggcccaggcggcttcctctgcggctggctccggccccgcggactccgagatggaggaa
gtatttgatgacgcatctcctggaaagcaaaaagaaattcaagaaccagatcctacctat
gaagaaaaaatgcaaactgaccgagcaaatagatttgaatatttattaaagcagacagag
ctgtttgcacatttcatccagcctgctgctcagaagactccaacctcacctttgaagatg
aaaccagggcgcccacgaataaaaaaggatgaaaaacaaaacttgttatcggttggcgac
taccgacatcgtagaacagagcaagaggaagatgaagaactattaacagaaagctctaaa
gcaaccaatgtttgcactcgatttgaagattctccatcatatgttaaatggggtaaactg
agagattatcaggtccgaggattaaattggctcatttctttatatgagaatggcatcaat
ggtatccttgcagatgaaatgggcctgggaaagactcttcaaacaatttctcttcttggg
tacatgaaacattatagaaacattcctggtcctcatatggttttggttcctaagtctaca
ttacacaactggatgagtgaattcaagagatgggtaccaacgcttagatctgtttgtttg
ataggcgataaagaacaaagagctgcttttgtcagagatgttttattaccaggagaatgg
gatgtatgtgtaacatcttatgaaatgcttataaaagagaaatctgttttcaaaaaattt
aattggagatacttagttatagatgaagctcacaggatcaaaaatgaaaaatcgaagttg
tcagaaatagtgagggaattcaagactacaaatcgactattattaactggaacacctctt
caaaacaacttgcatgagctctggtcactacttaattttttgttgccagatgtctttaat
tcagcagatgactttgattcatggtttgatacaaacaattgccttggggatcaaaaacta
gttgagaggcttcatatggttttgcgtccatttctccttcgtcgaattaaagctgatgtt
gaaaagagtttgcctccgaagaaggaagttaaaatctatgtgggtctcagcaaaatgcaa
agggaatggtatactcggatattaatgaaggatatagatatactaaactctgcagggaag
atggacaaaatgaggttattgaacatcctgatgcagttgaggaaatgctgtaatcatcca
tatctctttgatggagctgaacctggtccaccttatacaacagatatgcatctagttacc
aacagtggcaaaatggtggtgttagacaagctgctcccgaaattaaaagaacaaggttca
cgagtcctaatcttcagtcaaatgacaagggtattggatattttggaagattattgcatg
tggagaaattatgaatactgtagattggatgggcagacaccccacgatgagagacaagag
tccatcaatgcatacaatgaaccaaacagcacaaagtttgttttcatgttaagtacacgt
gctggtggtcttggcattaatcttgctactgctgatgtagtaattttgtatgattcagat
tggaatccccaagtagatctccaggctatggatcgagcacatagaattggacaaaccaag
actgttagagtgttccgctttataactgataacactgtggaagaaagaatagtggaacgt
gctgagatgaaactcagattggattcaatagtcattcagcaaggaaggcttgtggatcag
aatctgaacaaaattgggaaagatgaaatgcttcaaatgattagacatggggcaacacat
gtatttgcttcaaaagaaagtgagattactgatgaggatattgatggtattttggaaaga
ggtgcaaagaagactgcagagatgaatgaaaagctctccaagatgggtgaaagctcactt
agaaactttacaatggatacagagtcaagtgtttataactttgaaggagaggattataga
gaaaaacaaaagattgcattcacagagtggattgaaccacctaaacgagaaagaaaagcc
aactatgctgtcgatgcctattttagggaagctcttcgtgtcagtgaacctaaagcaccc
aaggctcctcggcctccaaaacagcctaacgttcaggatttccaattttttcctccgcgt
ttatttgagttactggaaaaagaaattttgtattacagaaaaactattgggtacaaggtg
cctcgaaatcctgacctaccaaatgcagcacaggcacaaaaagaagaacagcttaaaatc
gatgaagctgaaccccttaatgatgaagagttagaggaaaaggagaaacttctaacacag
ggctttaccaattggaataagagagattttaaccagtttatcaaagctaatgagaagtgg
ggtcgtgatgatattgaaaatattgcaagagaagtagaaggaaaaactccggaagaagtt
attgagtactcagctgtattctgggaaagatgcaatgaactccaggacatagagaagatt
atggctcagatcgaaaggggagaggcaagaattcaaagaagaattagtatcaaaaaagca
cttgatacgaagattggacggtacaaagcaccttttcatcagctgagaatatcatatggt
actaacaaaggaaaaaactacactgaagaagaggatcgcttcctaatctgtatgcttcac
aaacttggatttgacaaagaaaacgtttatgatgaattacgacagtgtattcgcaactct
cctcagttcagatttgactggtttcttaagtccagaactgccatggagctccagaggagg
tgtaacaccttaattaccttgattgaaagagaaaacatggaactagaagaaaaggagaag
gcagagaaaaagaagagaggaccaaaaccttcaacacagaaacgtaaaatggatggagca
cctgatggtcgaggaagaaaaaagaagctgaaactatga
DBGET
integrated database retrieval system
