Mustela nigripes (black-footed ferret): 132000125
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Entry
132000125 CDS
T09425
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnp04131
]
132000125 (LRBA)
Membrane trafficking [BR:
mnp04131
]
Endosome - Lysosome transport
Others
Others
132000125 (LRBA)
Endosome - Golgi transport
132000125 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
132000125 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Cnd3
WDR55
KNTC1_N
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
SUKH_6
Motif
Other DBs
NCBI-GeneID:
132000125
NCBI-ProteinID:
XP_059229577
LinkDB
All DBs
Position
1:complement(128892284..129621788)
Genome browser
AA seq
2861 aa
AA seq
DB search
MASEDNNVPSPPPTGDDGGGGGKEETSAEEGALSLKPGLPIRGIRMKFAVLTGLVEVGEV
SNRDIVETVFNLLVGGQFDLEMNFIIQEGESIICMVDLLEKCDITCQAEVWSMFTAILKK
SIRNLQVCTEVGLVEKVLGKIEKVDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGDK
GQWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMD
PVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLIITSIKSKGKGFQHCVKFDFKPQKWY
MVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQ
MTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAFT
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPLF
AQLDYRQYLSDEVDVTICSTLLAFILELLKNSVAMQEQMLACKGFLVIGYSLEKSSKSHV
SRAVLELCLAFSKYLSNLQNGMPLLKQLCDHILLNPAIWIHTPAKVQLTLYTYLSTEFIG
TVNIYNAIRRVGTVLLITHTLKYYYWAVNPQDRSGITPKGLDGPRPNQKEILSLRAFLLM
FIKQLVMKDSGVKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRNG
LRVIYKLMASTSEGIRVQALKAMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTNLIT
MTTYNVLFEILIEHICTQVIHKQHPDPDSSVKIQNPQILKVIATLLRNSPQCPESMEVRR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLYH
AVKYEWGGWRVWVDTLSITHSKVTFEIHKENLASMFREHQGKVDEEIGQCSSPVEAVSAI
SRDVNVSVASQQSDMKACLVSPRITRNSDEKSPVEQTISVDCASNAELQTPNTSNEERKT
GQESQELLDEVPSEETLINETINTGDLEVSSDMIEAEAETVSSNSFKMNGKGIMTVSEVT
ASISSPSEEDASEVPELLDKSIGEEDDDDYVELKVENSPTEEASLPTELQEDSLSPAASE
ASERLDMLSNDNKLIFQEQESVNKKQIDSETQDSKDSGILTMTASGSSATSPDTTVSQTP
VQSDIGEMLEEGKKTTNFVRETKLIGDSPVFESPTTSEQRIAKLDVSSVATDTERLELKA
NTNMEASQPHQPIPEMSRRQEEPSQGVAPVGVNGQRRDSRSAMFRIPEFRWSQMHQRLLT
DLLFSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMVMACGGILPLLS
AATSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKSMSSGGIL
RQCLRLVCAVAVRNCLECQQHSQLKSRGDTAKGQKTMHSLIPMGKSAAKSPVDIVTGGIS
PVRDFDKLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNER
HNQSFKETGNERGNSSLSDVENTPSAFSPLTPASVEESESTSSTRRRDSGIGEETAAGLG
NSVDVAPPSVPPSVSAGPDAISEALCTLSLEVNKSQETKNDGGNELDNKAAPSVPVSKNV
NVKDILRSLVNIPADGVTVDPALLPPACLGALGDLSVEQPVQFRSFDRSVIIATKKSAVL
PSTLTASLPTNAVSVVSSVDSSQASDVGGESPGGRSSNAKLPSVPTVGSVPQDQVSNMSI
TERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVML
LCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHRHAE
FESLCAQYSADKREDEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGNSAVSRP
REFWRLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHAADEDILAKGKQSIKSQALGN
QNSENEILLEGDDDTLSSVDEKDLENLTGPVSLSTPAQLVAPSVVVKGTLSVTSSELYFE
VDEEDSHFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQNTALEIFMANRVAVMFNF
PDPATVKKVVNYLPRVGIGTSFGLPQTRRISLASPRQLFKASNMTQRWQHREISNFEYLM
FLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFAER
YESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRTFSSISRAW
RNCQRDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFVRIN
RLALESEFVSCQLHQWIDLIFGYKQLGPEAVRSLNVFYYLTYEGAVNLNSITDPVLREAV
EAQIRSFGQTPSQLLIEPHPPRGSAMQVYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVTH
VAANTQPGLATPAVITVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGMH
RRQITDLLDQSIQVHSQCFVITSDNRYILICGFWDKSFRVYSTDTGKLTQVVFGHWDVVT
CLTRSESYIGGNCYILSGSRDATLLLWYWNGKSSGIGDNPGSETTTPRAILTGHDCEITC
AAVCAELGLVLSGSKEGPCLIHSMNGDLLRTLEGPENCLKPKLIQASREGHCVIFYENGC
FCTFSVNGKLQATMETDDNIRAIQLSRDGQYLLTGGDNGVVMVWQVSDLKHLFTYPGCDA
GIRAMALSYDQRCIISGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8586 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgaagacaataatgtcccttccccgccaccaacaggtgatgacgggggaggt
ggagggaaagaagaaacctctgctgaagagggtgcattgtccctgaaaccagggctcccc
atcaggggcatcagaatgaaatttgccgtgttgacggggttggttgaagttggagaagta
tccaatagggatattgtagaaactgtctttaacctgctggtaggagggcaatttgatttg
gaaatgaatttcattatccaagaaggtgagagtatcatctgcatggtggacctactagaa
aagtgtgatattacttgccaagcagaggtctggagcatgtttacagcgattctgaagaaa
agcatacgaaatcttcaggtctgcactgaagtaggtcttgttgagaaagtgcttgggaag
attgagaaagttgacaatatgatagcagatcttttggttgacatgttgggagtgctggct
agctataatttgaccgttcgagaactaaagctattcttcagtaaacttcaaggagataaa
ggacaatggcctccacatgctgggaagttgctatctgtgttaaagcatatgcctcagaag
tatggtcctgatgcctttttcaactttccaggaaagagtgctgcagccattgcattacct
cctatagccaagtggccataccagaatggttttacatttcatacctggctaagaatggat
cctgtaaataacatcaatgtggataaggataaaccatatttatattgtttcagaacaagc
aaaggtcttggttattctgctcactttgttgggggctgtttgattataacatcaataaag
tcaaaaggaaaaggctttcagcactgtgtgaaatttgattttaagccacaaaagtggtat
atggtaactatagtgcatatttataaccggtggaagaatagtgagcttcgttgttatgtg
aatggtgagctagcttcctatggagagataacatggtttgtcaacaccagtgataccttt
gacaaatgtttcctgggctcatcagaaacagcggatgctaatagagtattttgtggccag
atgactgcggtttaccttttcagtgaggctcttaatgctgctcagatatttgctatttat
cagttgggcctgggatataagggtacatttaaattcaaagcagaaagtgatttgtttctt
gctgagcatcacaaacttttattgtatgatggcaaactctctagtgccattgcattcaca
tacaatccacgtgctacagatgcccagctctgccttgaatcatcccccaaggacaatcct
tcaatttttgttcattcaccacatgcacttatgctccaggatgtgaaggcagttttaaca
cattccattcaaagtgctatgcattcaattggaggagtacaagtgctatttccacttttt
gcacagttggattataggcaatatttatctgatgaggttgacgtgactatatgttcaact
ttgctggctttcatcctggagttgctgaagaactcagttgctatgcaggagcagatgctt
gcctgcaagggcttcttggtaataggatacagtcttgagaagtcttccaaatcccatgtc
agcagagcagtacttgaactttgtcttgcattttcaaaatatctgagcaatctgcagaat
gggatgcccctactcaaacagttgtgtgatcacattcttcttaacccagctatatggatt
cataccccagccaaggttcagttgacactctatacttacctatccacggaattcattggt
acagtcaacatatataatgccattcggagagttggaacagtgcttctcatcacgcataca
ctgaagtactactactgggcagtgaatcctcaggatcgaagtggtattacgcctaaagga
ttagatggaccacgacctaatcaaaaagaaatactttctctacgagcattcttgttgatg
ttcattaagcagttagtgatgaaggattctggagtaaaggaagatgaactgcaggccatt
cttaattacctcctcactatacatgaggatgacaatctaatggatgtcctacaactgctt
gttgcattaatgtcagaacaccctaactctatgattcctgcttttgaccaaaggaatgga
ttacgtgtcatctataaacttatggcatcaacaagtgaaggaatcagagtacaagctctc
aaggcaatgggctattttttaaagcacctggcgccaaaaagaaaagctgaagttatgctt
ggacatggattattttcattgctagcagaaagactcatgcttcagacaaatttaatcaca
atgaccacatacaatgttttgtttgagattcttatagagcatatttgtactcaagtgata
cacaaacagcatccagatcctgattcttcagtaaagattcaaaatcctcagatactaaaa
gtaattgcaaccctacttcgaaattctccccagtgtccagagagcatggaagttcgcaga
gcctttctttctgacatgattaaactttttaataacagtagagaaaacagaaggagcttg
ctacagtgttctgtatggcaagagtggatgctttctctttgctatttcaatcctaagaat
tctgatgagcaaaagataacagaaatggtgtatgccatattcagaatcctactttaccat
gcagtcaaatatgagtggggtggctggcgtgtgtgggtagacaccttatcaatcacacat
tcaaaggtcacttttgaaatacacaaagaaaatcttgccagtatgttcagggaacaccag
ggaaaagttgatgaagaaatagggcaatgttcaagtccagttgaagcagtctctgccatt
agcagggatgttaatgtttcagtagcatcccagcaatcagatatgaaggcttgtcttgtg
tctcctcgtatcaccagaaatagtgatgaaaagtcacctgttgagcagacaatttcagta
gactgtgcttccaatgctgaactgcaaactcctaatacatctaatgaagaaaggaaaact
ggccaagaaagtcaggagttactagatgaagtcccttcagaggaaacattgataaatgaa
acaattaatacaggtgatttagaagtatcctctgatatgatagaagctgaagccgagact
gtttcctctaactcttttaaaatgaatggcaaaggtataatgactgttagtgaagtaact
gcttctataagttctccttcagaagaggatgcctcagaggtgccagaattattggataag
tctataggagaggaagatgatgatgattatgtagaattgaaggtagaaaatagtcctact
gaggaagccagtctgcccacagagctccaagaagatagtttgtctccagctgcatctgaa
gccagtgaaagactggacatgcttagtaatgacaacaaattaatatttcaagaacaagaa
tctgtaaataagaagcaaattgacagtgaaactcaagattccaaagattctggaatcttg
acgatgacagcatcagggtcttcagctacctcaccagatactactgtttcccagacacct
gtacaatcagatattggtgagatgctagaggaagggaaaaaaacaactaattttgtgaga
gaaaccaaattaattggtgattctcctgtctttgagtctcctactacttctgagcagagg
attgctaaattggatgtttccagtgttgctacagatactgaaagattggaattgaaggcc
aatacaaatatggaagcatctcaacctcatcaacctatacctgagatgtccagacggcag
gaggaaccaagtcaaggagttgcaccagttggagttaatggacaaaggagggattccaga
tctgctatgtttcgtattcctgaattcagatggtctcaaatgcatcagcgtttgctcact
gatctattattttcaatagaaacagatatacagatgtggagaagccattcgacaaagaca
gttatggacttcgtgaatagcagtgataatgtcatctttgtacacaacacaattcatctc
atctctcaagtgatggacaatatggtcatggcttgtgggggtatactgccattgctttca
gcagctacatcggctacacatgagctggagaatattgaacctactcagggcctttcaata
gaagcctctgtgacatttttgcagaggctaatcagccttgtggatgtgcttatatttgca
agttctcttggctttactgaaattgaagctgaaaaaagtatgtcttcgggtggaatttta
cgacagtgtctccgactagtgtgtgcagtggcagtaaggaattgtttagagtgtcaacag
cattcacaactgaaatctagaggagatacagccaaaggccagaaaacaatgcacagcctg
attcccatggggaaatctgcagcaaagagtcctgtggatattgtaactggtggtatatct
ccagtaagagattttgacaagctcctacaagacatggatattaatcggcttagggcagtt
gtcttcagagacatagaggatagcaaacaagctcaatttttagccttggcagttgtatac
tttatttctgttcttatggtctcaaagtatagagatattttggaaccccaaaacgaaagg
cataaccagtcatttaaggaaactggtaatgaacgtgggaattcatcactttctgatgta
gaaaacacaccatcagcattcagtccattaacaccagcatcagtggaagaatctgaaagc
acatcatctacacgaaggagggactcaggcattggggaagaaactgctgccggcttagga
aacagtgtggatgtagctcctccaagtgtacctccaagtgtcagtgcaggtccagatgca
atcagtgaggcactgtgtactctttctttagaagtcaataaatctcaggaaaccaaaaat
gacggaggaaatgagttggataacaaggctgcaccatcagttccagtttcaaaaaatgtc
aatgtaaaggacattcttcgaagtttggttaatataccagcagatggagtcacagtggat
cctgcccttctgccaccagcctgccttggagctcttggtgatctatctgttgaacaacct
gtgcagttcagatcttttgatagaagtgtcatcattgcaacaaaaaaatcagcagtctta
ccttctacacttactgcaagtctacctaccaatgctgtcagtgtggtttcttcagtagat
tcaagccaagcctcagatgtaggaggagaatcacctggtggtagatcatctaatgcaaaa
ttgccgtcggtgccaacagttggctcagttccacaagaccaagtttcaaatatgagtatt
acagagaggcttgaacatgctttggaaaaggcagctcctcttctgcgagagatttttgtg
gattttgcaccttttctttctcggacacttttgggtagtcatggacaagaactgcttata
gaaggaacaagtctggtttgcatgaagtctagtagttcggttgtggaattggttatgcta
ctgtgttctcaggagtggcagaattctatccagaagaatgcaggccttgcttttattgaa
cttgtcaacgaaggaaggttgcttagccaaacaatgaaggatcatctagtaagagtagca
aatgaagctgaatttatcctgagcaggcaacgagcagaggatattcacagacatgcagaa
tttgagtcactgtgtgcccagtattcagcagacaaacgagaagatgagaagatgtgtgat
catctgataagagcagctaaatatcgggaccatgtgacagcaactcagctaatccagaaa
attatcaacattctcacagacaagcatggagcctggggaaattctgcagtgagtcgtcct
cgtgagttctggcgccttgactactgggaagatgacttgcggcgccggcgacgatttgtg
cgtaaccctctaggatcgacacatcctgaagcgacactaaaaacagccgtggaacatgct
gcagatgaagatatccttgctaaaggaaaacagtccatcaagagtcaggctttaggaaat
cagaactcagaaaacgagatcctcctggaaggcgacgacgatactctgtcatccgtggat
gagaaagatttagagaatctcactggtcctgttagcctgagcacaccggctcagcttgtg
gccccctctgttgtagtaaagggcactctttctgtcacctcctccgaactctattttgag
gtggatgaagaggactctcacttcaagaaaatcgaccccaagatcctggcatatacagaa
gggctgcatggaaaatggctattcacagagatacgatcaatcttttctcgtcgttatctt
ttgcaaaatacagctttggagatctttatggcaaacagagttgctgtaatgttcaacttc
ccagaccctgcaacagtaaagaaagtggttaattatctacctcgtgttggtattggaacc
agttttggtttacctcaaaccaggcgtatctcattagctagtccacgtcaactctttaaa
gcttctaatatgactcagcgatggcagcatagagagatttcaaattttgagtatttgatg
tttctcaacacaatagcaggacggagttacaatgacttaaatcagtatccagtgtttccc
tgggtcatcactaattatgaatcagaagaactggatcttaccttgccaagcaacttcaga
gatttgtccaagccaataggagctttgaatccaaaaagagcagcattctttgcagagcgt
tatgaatcatgggaagatgatcaagttccaaagttccactatggtactcattactcaact
gcaagttttgttcttgcatggctgctaagaatagaacctttcacaacttatttcctcaat
ttgcaagggggtaaatttgatcatgcagatcgaactttttcatcaatttccagagcttgg
cgaaactgtcagcgtgatacatctgatattaaggagttgatccctgaattttattatctc
cctgagatgtttgtcaacttcaataattataatcttggagtgatggatgatgggacagta
gtgtctgatgttgaacttcctccttgggccaaaacctcagaagaatttgttcgcataaac
agattggccctggagagtgaatttgtttcctgccagcttcaccaatggattgatctcatt
tttggctataaacagctaggaccagaggctgttcgatccctcaatgtgttctattacctg
acctatgaaggagctgtcaatctgaattcaataactgatcctgtattgagagaggctgtt
gaagctcaaattcgaagttttggacagacaccttctcaactgcttatagagccccatcct
cccagaggttctgctatgcaagtgtatctcctcctgcagagtccattgatgttcacagac
caagcccagcaggatgttatcatggtcctaaagtttccgtccaactcccctgtcactcat
gtggcagctaacacccagcctggcttggcaactcctgctgtgatcacagtcactgctaac
aggctctttgccgtgaacaagtggcacaaccttcctgctcatcaaggtgcagtacaagac
cagccataccagctgccagtggaaatcgatcctctcatagccagcaatacaggaatgcac
aggaggcaaatcactgaccttttagaccaaagtattcaagtccattcccagtgctttgtc
atcacttcggacaaccgctatattctcatctgtggcttctgggataagagtttccgagtc
tactctactgacacaggaaaattgactcaggtggtatttggccattgggatgtggtcact
tgcctcactcgttctgagtcctatattgggggaaattgctacattctctcaggatcacgt
gacgcgacccttctgctctggtactggaatggaaaaagcagcgggattggagataaccca
ggcagtgagaccaccactcctcgagccattctaacaggccacgactgtgagatcacctgt
gctgccgtctgtgctgagctgggcctggtgttaagtggctccaaagaaggaccatgtctc
atacattccatgaatggagacttactaaggactttggagggtcctgagaactgcctgaaa
ccgaaactcattcaggcttcaagagagggtcattgtgtcatattctatgaaaatggctgc
ttctgtacattcagtgtcaacgggaaacttcaggccactatggaaacagatgataacata
agagccatccagctgagccgagatgggcagtacctgctcacaggaggagacaacggtgtg
gtcatggtctggcaggtgtctgacctcaagcacctcttcacctatccaggctgcgatgct
ggcatccgggccatggccctgtcttacgaccagaggtgcatcatttctggcatggcctcg
ggaagcatcgtcctgttttacaacgactttaaccggtggcatcacgaataccaaacccgc
tactga
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integrated database retrieval system
