Mustela nigripes (black-footed ferret): 132001173
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Entry
132001173 CDS
T09425
Name
(RefSeq) LOW QUALITY PROTEIN: beta-TrCP-like
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04114
Oocyte meiosis
mnp04120
Ubiquitin mediated proteolysis
mnp04218
Cellular senescence
mnp04310
Wnt signaling pathway
mnp04340
Hedgehog signaling pathway
mnp04390
Hippo signaling pathway
mnp04710
Circadian rhythm
mnp05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132001173
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
132001173
04340 Hedgehog signaling pathway
132001173
04390 Hippo signaling pathway
132001173
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
132001173
04218 Cellular senescence
132001173
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
132001173
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
132001173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnp04121
]
132001173
03036 Chromosome and associated proteins [BR:
mnp03036
]
132001173
Ubiquitin system [BR:
mnp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132001173
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
132001173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-TrCP_D
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Beta-prop_SCAP
Beta-prop_EML
F-box-like
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
F-box
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_Nup120_160
NBCH_WD40
WD40_RFWD3
Beta-prop_DCAF12
F-box_5
Beta-prop_IP5PC_F
Gp44-like_2nd
Motif
Other DBs
NCBI-GeneID:
132001173
NCBI-ProteinID:
XP_059231507
LinkDB
All DBs
Position
1:complement(253068257..253100104)
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AA seq
606 aa
AA seq
DB search
MDPDELMFEVLGPRTWNYRVFMGGAVGQVLRAMLVAVRLLAGSSRCQGYGEGPAEENSSE
IEDCNNGEPPRKIIPEKNSLRQIYNSGARLCLNQDRVCLASTAMKTENCVAKTKLANGIS
SMIVPKQQKLSVSYEKEKEPCVKYFEQRSESDQVEFVEHLISQMCHYQHGHINSYLKPML
QRDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLRKKLIERMVRTD
SLWRGLAEQRGWGQYLFKNNPPDGNALPNSFSRALYPKIIQDIETIEFNWRCGRHLRRIH
CQSETSNGVCCSQYDDQKIVSGLRXVKIWDKSTLERKQILTGHTGSVLCLPYDVRVIITA
SSDSTVREWDVNTGEMLNTLTHHCEAVLHSHFNNGMMVMCSKDRSTAVWDMASPTDITLW
RVLVGHRAAVNVVDFDDKYVVSASGDRTIKVWNTSTCEFVRTLNGHQRGLACWQYQDRLV
VSGSCDNTIRLWDIECGACLRVLENHEELVRCIRFNNKRIVSGAYDGEFKVWDLVATLDP
XSPAGTLCLRTLVEHSRRVFRLQFDEFQIVSSSHDDTILIWDFLNNPAAQAEPLCSPSRT
YTYISR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggacccagatgagctcatgttcgaggttctgggccccagaacgtggaattatagggtt
tttatggggggtgctgtgggtcaggttctaagggctatgctggttgctgtgaggttgctg
gcagggtcttctcggtgtcagggttatggggaaggcccagcagaggagaattcctcagag
atagaagactgtaataatggcgaaccacccaggaagataataccagaaaagaattcactt
aggcagatctataacagcggtgccaggctctgcttaaaccaagatagagtatgtctagca
agcactgctatgaagactgaaaattgtgtggccaaaacaaaacttgccaatggcatttcc
agtatgattgtgcccaagcaacaaaagctctcagtaagctatgagaaggaaaaagaacca
tgtgtcaaatattttgagcagcggtcagagtctgatcaagtggaatttgtggaacatctt
atatcccaaatgtgtcattaccaacatgggcacataaactcgtatcttaaacctatgttg
cagagggatttcataactgctctgccagctcggggtttggatcacattgctgagaacatt
ctgtcatacttggatgccaaatcactatgtgctgctgaacttgtatgtaaggaatggtac
cgagtgacatctgatggcatgttacggaagaagctcatcgagagaatggtcaggacagat
tctctgtggcgaggactggcggaacaaagagggtggggacagtatttattcaaaaacaat
cctcctgatgggaatgctcttcccaattctttttctagagcactttatcctaaaattata
caagacattgagacaatagaatttaattggagatgtggaagacatttacggagaatccac
tgccaaagtgaaacaagcaatggggtttgctgttcgcagtatgatgatcaaaagatagtc
agcggccttcgantagtcaagatctgggataaaagcacgttggaacgcaagcaaattctc
acaggccacacgggttctgtcctgtgtctcccatatgatgtgagggtgatcataactgca
tcatcagattccacagtcagagaatgggatgtaaatacaggtgagatgctaaacacgctg
actcaccattgtgaagcagttctgcattcgcatttcaataatggcatgatggtgatgtgc
tccaaagaccgttccactgctgtatgggatatggcctccccaactgacatcaccctctgg
agggtgctagttggacaccgagctgctgtcaatgttgtagattttgatgacaagtacgtc
gtttctgcatctggagataggactataaaggtatggaacacaagcacttgtgaatttgtg
aggaccttaaatggacaccaacgcggccttgcctgttggcagtaccaagacagactggtt
gtgagtggctcatgtgacaacactattagattatgggacatagaatgtggtgcatgttta
cgagttttagaaaaccatgaggaactggtgcgctgtattagattcaataacaagagaata
gtcagtggggcctatgatggagaatttaaagtgtgggatcttgtagctactctggacccc
ncatctcctgcagggacactctgtctacggacccttgtggagcattctaggagagttttc
cgactccagtttgatgaattccagattgtcagtagttcacatgatgacacaatcctcatc
tgggacttcctaaacaatccagctgcccaagctgaacccctgtgctccccttctcgaaca
tacacctatatctccagataa
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