Mustela nigripes (black-footed ferret): 132001185
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Entry
132001185 CDS
T09425
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mnp03016
]
132001185 (TRMT13)
Enzymes [BR:
mnp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
132001185 (TRMT13)
Transfer RNA biogenesis [BR:
mnp03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
132001185 (TRMT13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
132001185
NCBI-ProteinID:
XP_059231484
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Position
14:85490020..85510770
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AA seq
481 aa
AA seq
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MAASAPAPHTTDFPVEGRCSYYVEKKKRFCRMVVAAGKRFCGEHAGAAEEENARKRILCP
LDPKHTVYEDQLSKHLKKCNSREKPKPDFFIQDINAGLKDETEISEQLVPISSLSEEHLE
NLIKKLQKASEGLNSTLKDQIMSHPALHDALNDPKNGDSATKHLKQQASILGNIEKLKLL
GPRRCFVEFGAGKGKLSHWVDIALKDAEKVHFILVEKVTTRFKVDGKHRKKNSVFERLQI
DIQHLCLNKIPLLSKEKLPVVGIGKHLCGVATDLALRCLVETYAASCEERNEEPLAKRIK
NDKTGKEINTVAKKGNEKNVPEKWSPVAGIVIALCCHHRCDWRHYVGKEYFRALGLGAVE
FHYFQRMSSWATCGMRKTSLEASSLSTKRKDEQNDDSEEHDDGGCQITDESSGSAPGFLT
VEEKKKIGHLCKLLIDQGRVEYLRQKGFSPALQYYTDPLVSLENVLLTALPNHSSSPETT
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctgcgcccgccccgcacacgactgacttcccggttgagggtcgctgcagt
tactatgtggaaaagaagaagcgcttctgcaggatggtggtggcagcggggaaaagattc
tgtggggaacacgctggagccgcggaggaagaaaatgctcggaaaagaattctgtgtcct
ttagatccaaaacacacagtatatgaagatcaactatcaaagcatttgaaaaagtgtaac
tcaagagagaagccaaaacctgacttctttattcaagatattaacgcaggcttaaaagat
gaaacagaaatatctgaacaattagttccaatttcttctctttctgaagagcatttggaa
aacttaattaagaaattgcagaaagcaagtgaaggtttgaactctacacttaaagatcaa
attatgtcccatccagcattgcatgatgcccttaatgaccctaaaaatggtgattctgca
accaaacacctgaaacagcaggcttctattttaggtaacattgaaaaattaaagttactt
ggtccaagaagatgctttgttgagtttggagcaggaaagggaaaattatctcattgggtt
gatattgccttaaaagatgctgaaaaagttcacttcatcctagtagaaaaggtgaccacg
agattcaaggtagatggcaaacacagaaagaaaaattcagtatttgagagacttcaaatt
gatattcaacacttgtgtttgaataagattcctttgctaagcaaagaaaaactacctgtg
gtaggaattggaaagcatctatgtggtgtggcaacagatcttgcattacgatgtttggtt
gaaacctatgctgccagttgtgaggaaaggaatgaagaacctttagccaaacgcataaag
aatgataaaacaggaaaagaaattaacactgtggccaagaaaggaaatgagaaaaatgtc
ccagagaagtggagccctgtggctggcattgttattgcactctgttgtcaccacaggtgt
gattggagacattatgtgggcaaagagtatttcagggctctaggccttggagcagtggaa
ttccactacttccagcgaatgagtagttgggcaacttgtgggatgcgaaaaacatctttg
gaagcctccagtctcagcacaaagagaaaagatgagcagaacgatgatagtgaagagcat
gacgacggtggatgccaaatcacagacgaaagcagtggcagtgcgcctgggttccttact
gttgaagagaagaagaaaatagggcatctttgtaaattgctgattgatcaaggccgagtc
gagtatttacggcagaaaggattcagtcctgctttacagtattatacagatcctctggtg
tctttggaaaatgtattgttaactgctttaccaaatcattcttcatcaccagaaacaact
gcttaa
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