Mustela nigripes (black-footed ferret): 132001949
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Entry
132001949 CDS
T09425
Symbol
SDC3
Name
(RefSeq) syndecan-3 isoform X1
KO
K16337
syndecan 3
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04514
Cell adhesion molecule (CAM) interaction
mnp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
132001949 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132001949 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mnp00535
]
132001949 (SDC3)
Proteoglycans [BR:
mnp00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
132001949 (SDC3)
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Ortholog
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Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
132001949
NCBI-ProteinID:
XP_059232921
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Position
14:complement(22810685..22845914)
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AA seq
442 aa
AA seq
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MKPGPPHRAGAAHGAGAGNGAAAGPGARGLLLPPLLLLLLAGRAAGAQRWRSENFERPVD
LEGSGDDDSFPDDELDDLYSGSGSGYFEQESGIETAMRFSPDVAMAVSTTPAVLPTVDIQ
PVGTPLEELPSGHPTPEPATSPPVVTEVPEEPSQRATTISTPTATTAATTAGTLSVATVP
ATVATAAPSLPAAPPSAATTSVIRTTGVRRLLPLPLTTAVTARATTPAAPAPPTTVAVLD
TEAPTPRMVSTATSRPRALPRPATTQEPDIPEKSTLPLGTTAPGPTEVAQTPTPESVLTT
IRDEPEVPVSGGPSGDFELPEEETTQPDTANEVVAVGGAAAKPSAPPGALPKGARPGPGL
LDNAIDSGSSAAQLPQRSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYT
LEEPKQASVTYQKPDKQEEFYA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgggaccaccgcaccgcgccggggccgcccacggggcaggcgccgggaacggg
gccgcggccgggcccggggcccgcgggctgctcctgccgccgctgctgctgctgctgctg
gccgggcgcgccgcgggggctcagcgctggcgcagcgagaacttcgagaggcccgtggac
ctcgagggctctggggatgatgactccttccccgacgatgagctggacgacctctactca
gggtcgggctcgggttactttgagcaggagtcgggcattgagacagccatgcggttcagc
ccagacgtggccatggcggtgtcgaccacgcccgcagtgctgcccaccgtggacatccag
cctgtgggcaccccgttggaagagctcccttctgggcaccccaccccagagccagccact
agcccccccgtggtgacagaggtaccagaagaacccagccagagagccacgaccatctcc
actcccacggctaccacagctgctacgactgcagggaccctaagtgtggccacggtgcct
gccacggtggccactgccgcccccagcctccccgcggcccccccttccgcggccaccacc
tccgtcataaggaccaccggtgtgcggaggcttctgcctcttccattgaccacggcagtc
acggcccgggccaccactccagcggcacccgcacctcccaccacggtggctgtcttggac
acagaggccccgacacctaggatggtcagcacagctacctccaggccaagggcccttccc
aggccagctaccacccaggagcctgacatccccgagaagagcaccttgcccctggggacc
actgcccctggacccacagaggtggctcagaccccaactccggagtccgtcctgaccacg
atccgggatgagcctgaggtgcctgtgagtggggggcccagcggggactttgagctgcca
gaagaggagaccacacagccagacacagccaatgaggtggtggccgtgggtggggccgcc
gccaagccatcagctccacctggggcgctgcccaagggtgcacgcccaggccccggcctc
ctggacaacgccatcgactcaggcagctccgccgctcagctgccccagagaagcatcctg
gagcggaaggaggtgctcgtagctgtgattgtaggtggggtggtgggcgccctgttcgct
gccttcctggtcaccttactcatctaccgcatgaaaaagaaggacgagggaagctacacc
ttggaggagcccaagcaggcgagcgtcacgtaccagaagcccgacaagcaggaggagttc
tacgcctag
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