Mustela nigripes (black-footed ferret): 132002263 Help Entry 132002263         CDS       T09425                                  Symbol COL11A1 Name (RefSeq) collagen alpha-1(XI) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism mnp  Mustela nigripes (black-footed ferret) Pathway mnp04820   Cytoskeleton in muscle cells mnp04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:mnp00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     132002263 (COL11A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     132002263 (COL11A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mnp00536]     132002263 (COL11A1) Glycosaminoglycan binding proteins [BR:mnp00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    132002263 (COL11A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1 Motif Other DBs NCBI-GeneID:  132002263 NCBI-ProteinID:  XP_059233338 LinkDB All DBs Position 14:complement(87860693..88068657) Genome browser AA seq 1806 aa AA seqDB search MERWSSRWKTKRWLWNFTITTLALTFLFQAREVRGAAPVDVLKALDFHNSPEGISKTMGF CTNRKNSQGSDTAYRVSKQAQLSAPTKQLFSGGNFPEDFSILFTIKPKKGIQSFLLSIYN EHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV DCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQLLIIGDPKAAYDYCEHYS PDCDSSVPKAAQAQEPQIDEYAPEDIMEYDYEYGEAEYKEAEFVTETPTVTEETIAQTEA NIVDDFQEYNYGTEESYQTEAPRHVSGPNEPNPVEEVFTEEYLTGEDYDSQRKNSEDTLY ENKEIDGRDSDLLVDGDLGEYDFYEYKEYEDKPTSPTNEDFGPGVPAETDITETSINGHG GYGEKGQKGEPAVVEPGMLIEGPPGPAGPAGLMGPPGLQGPTGPPGDPGERGPPGRPGLP GADGLPGPPGTMLMLPFRYGGDSSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRP GPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDR GFDGLPGLPGDKGHRGERGPQGPPGPPGEDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTP GPTGQPGIAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKP GLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEK GEDGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVP GLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKP GPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKT GPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGVSGKD GPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQ GPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSK GDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQ GLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSVGGVGEKGEPGEA GNPGPPGEAGTGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPP GEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAK GEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLP GLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPIGPP GPPGLPGPQGPKGTKGSAGPAGQKGDSGLPGPPGPPGPPGEVIQPLPILSPKKTRRHVEN MQADAGDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDG EYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKL LSYLDVEGNSINMVQMTFLKLLTASARQNFTYTCHQSAAWYDVSSGSYDKALRFLGSNDE EMSYDNNPYIKALYDGCASRKGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVG PVCFLG NT seq 5421 nt NT seq  +upstreamnt  +downstreamnt atggagcggtggtcctctaggtggaaaacgaaacggtggctctggaatttcaccataaca accctcgcactgactttcctcttccaggctagagaggtcagaggagctgctccagttgat gttctgaaagctctagattttcacaactctccagagggaatatcaaaaacaatgggcttt tgcacaaacagaaagaattcacaaggttcggatactgcttacagagtttcaaagcaagca caactcagtgctccaacaaagcagttattttcaggaggaaattttccagaagatttttca atattatttacaataaaacccaaaaaaggaattcagtctttccttttatctatatataat gagcacggtattcagcaaattggtgttgaggttgggagatcacctgttttcctgtttgaa gaccacactggaaaacctgccccagaagactatcccctcttcagaactgttaacattgct gatgggaagtggcatcgagtagcaatcagcgtggagaagaaaactgtgacaatgattgtt gattgtaagaaaaaaaccacaaaaccacttgatagaagtgagagagcaattgttgacacc aatggaatcacggtgtttggaacaaggattctggatgaagaagtttttgagggggacatc cagcagctgttgatcataggtgaccccaaagctgcttatgactactgtgagcattatagt ccagactgtgactcttcagtgcccaaggctgctcaggctcaggaaccgcagattgatgag tatgcacctgaggatataatggaatatgactatgagtatggggaagcagagtataaggag gctgaatttgtaacagagacacccactgtaactgaggagacaatagcacaaaccgaggca aatattgttgatgattttcaagaatacaactatggaacagaagaaagttatcagacagaa gctcctaggcatgtatctggaccaaatgagccaaatccagttgaagaagtatttactgaa gaatatctaactggagaggattatgattcccagaggaaaaattccgaggatacactatat gaaaacaaagaaatagacggcagggactctgacctgctggtagatggagatttaggcgaa tatgatttttatgaatataaagaatatgaagataaaccaacaagtcccactaatgaagac tttggtccaggtgttccagcagaaacagatatcacagaaacaagcataaatggccatggt ggatatggagaaaaggggcagaaaggagaaccagcagtagttgaacctgggatgcttatt gaaggacccccaggaccagcaggacctgcgggtcttatgggtccccctggtctacagggc cccactggacctcctggtgaccctggagagaggggtcccccagggcgtcctggcttacca ggggctgatggtctgcctggtcctcctggtaccatgttaatgttaccgtttcgttacggt ggtgatagctccaaaggaccaaccatctctgctcaggaagctcaggcccaggcaattctt cagcaggcccggattgctctgcgaggcccacctggcccgatgggtctaactggaagaccg ggtcctgtgggggggcctggttcatctggtgccaaaggtgagagtggtgatccaggtcct cagggcccccgtggtgttcaaggtccgcctggtccaacgggaaaacctggaaaaaggggt cgtccaggtgctgatggaggaagaggaatgcctggagaacctggggcaaagggggatcgg ggatttgatggacttccaggtctgccaggtgacaaaggtcacaggggtgaacggggtccc caaggtcctcctggtcctcctggagaagatggaatgaggggagaagatggagaaatagga ccaaggggtcttccaggtgaagctggtccacgaggtctgctgggaccaaggggaactcca ggacctaccgggcagcctggtattgcaggtgtagatggccccccaggaccaaaaggaaac atgggtccccaaggagagcctgggcctccaggtcagcaagggaatccaggacctcagggt cttcctggtccacaaggtccaattggtcctcctggtgaaaaaggtccacaaggaaaacca ggccttgcaggacttcctggagctgatggtcctcctggtcatcctggaaaagaaggccag tctggagaaaagggtgctctgggtcctcctggcccacagggtcctattggctaccctggt ccccggggagtaaagggagcagatggtgtcagaggtctcaaaggctctaaaggtgaaaag ggtgaagatggttttccaggattcaaaggtgacatgggtcttaaaggtgatagaggagaa gttggtcaagtaggtccaagaggagaagatggccccgaaggacctaagggtcgagcaggt ccaactggagatcctggtccttctggtcaagcaggagaaaaggggaaactcggcgttcca ggattaccaggatatccagggagacaaggtccaaagggttccactggatttcctgggttt ccaggtgccaatggagagaaaggtgcacggggtgtcgctggcaaaccaggccctcggggt cagcgtggtccaacgggtcctcgaggttccagaggcgcgagaggtcccactgggaaacct ggcccaaagggcacttcaggcggtgatggccctccaggccctcctggtgaaagaggccct caaggacctcagggtccagttggattccctggaccaaaaggccctcctggaccacctggg aaggatggcctgccaggacaccctggacaacgtggagagactggatttcaaggcaagact ggcccccctgggccagggggtgtcgttggaccacagggaccaactggtgagactggtcca ataggtgaacgaggacatcctggccctccggggccccctggtgagcaaggtcttcccggt gctgcaggaaaagaaggtgcaaagggtgacccaggtcctcaaggtgtctcagggaaggac ggaccagcgggactgcgtggtttcccaggtgaaagaggtcttccgggagctcagggtgca cctgggctgaaaggaggggaaggtccccagggcccaccgggtccagttggttcaccagga gaacgtggatcagcaggtacagctggtccaattggtttgccaggacgtccaggcccccag ggtcctcctggtccagctggagaaaaaggtgctcctggagaaaaaggtccccaaggtccc gctgggagagatggagttcaaggccctgtgggtctcccaggacctgctgggcctgcgggc tcccctggagaagatggagacaagggtgaaattggtgaaccgggacagaagggcagcaag ggtgacaaaggagaaaatggtcctcctggtcctccaggtcttcagggtcccgttggtgcc cctggaattgctggaggtgatggtgagccgggtcccagaggtcagcaagggatgtttgga caaaaaggtgacgagggtgccagaggtttcccaggacctcctggtcccataggtcttcag ggtctgccgggcccacctggtgaaaaaggggaaaacggggatgttggtcccatgggtcca cctggtcctccaggcccaagaggccctcaaggtcccaatggagctgatggaccacaagga cccccaggatccattggttcagttggtggtgttggagaaaagggtgaacctggagaagca gggaacccagggcctcctggggaagcaggcacaggcggccccaaaggagaaagaggagag aaaggagaagctggcccacctggtgctgccggacctcctggtgctaagggaccaccaggt gacgatggcccgaagggtaacccgggtcctgttggttttcctggagatcctggtcctcct ggggaacctggccctgcaggtcaagatggcgttggtggtgacaagggtgaagatggagat cctggtcagccgggtcctcctggcccgtctggtgaggctggcccaccaggtcctcctgga aaaagaggtcctcccggagctgcaggtgcagagggaagacaaggtgaaaaaggtgctaag ggagaagcaggtgccgaaggtcctcctggaaaaacgggcccagttggccctcagggacct gctggaaaacccggtccagagggtcttcggggcatccctggcccagtgggagaacaaggt ctccctggagctgcgggccaagatgggcctcctggtcccatgggacctcctggtttacct ggtctcaaaggtgaccctggttccaagggtgagaagggacatccgggtttaattggcctg attggtcctccaggcgaacaaggtgaaaagggtgacagaggactccccggaactcaagga tctccaggagcaaagggggatggaggaattccgggtcctgctggtcccataggtccacct ggtcccccaggcttaccaggccctcaaggtccaaagggtaccaaaggctctgctggacct gccggccagaagggtgacagtggtcttccagggcctcctgggcctccgggtccacctggc gaagtcattcagcctttaccaatcttatcacccaaaaaaacaagaagacatgttgaaaac atgcaagcagatgcaggtgataatattcttgattactcagatggaatggaggaaatattc ggttccctcaattccctgaaacaagacatcgaacatatgaagtttccaatgggtactcag actaacccagcccgaacttgcaaagacctgcaactcagccatcctgacttcccagatggt gaatattggattgatcctaaccaaggatgctcaggagattccttcaaagtttactgtaat ttcacgtctggtggtgagacttgcatttatccagacaaaaaatctgaaggagtaagaata tcatcatggccaaaagagaaaccaggaagctggtttagtgaatttaagagaggaaaactg ctttcctatttggatgttgaaggaaattccattaatatggtgcaaatgacattcttgaaa ctgctgactgcctctgcgcggcagaatttcacctacacctgccatcagtcagcagcctgg tacgatgtgtcatcgggaagttacgacaaagcacttcggttcctggggtcaaatgatgag gagatgtcctatgacaacaacccttacatcaaagcactgtatgatggctgtgcgtccaga aaaggctatgaaaaaactgtgattgaaatcaataccccgaaaattgatcaagttcctatt gttgatgtaatgatcaatgactttggtgatcagaatcagaagtttggatttgaagttggt cctgtttgtttccttggctaa

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