Mustela nigripes (black-footed ferret): 132002445
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Entry
132002445 CDS
T09425
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04360
Axon guidance
mnp04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
132002445 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
132002445 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mnp04040
]
132002445 (TRPC4)
Ion channels [BR:
mnp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
132002445 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
132002445
NCBI-ProteinID:
XP_059233403
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All DBs
Position
15:complement(18966416..19110168)
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AA seq
982 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDSSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGVRTQHRRAADNLRRHHQYQEVMRNLVK
RYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTVQAAQATKESSNSA
DSDEKSDNEGSGRDKRKNFSLFDLTTLIHPRSAAIASERHNISNGSALVMQEPPREKQRK
VNFVTDIKNFGLFHRRSKQNAAEQNANQIFSVSEEVTRQQAERPMERSIQLESRGLASRG
DLNIPGLSEQCILVDHRERNTDSLGLQVGKRVCSFKSEKVVVEDTVPIIPKEKHEKEEDS
SIDYDGNLTDTASHEDYVTTRL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctactacaaaaggaacgtgaatgctccctacagagatcggatccctcta
aggatagtccgagcggaatcagaactctcaccgtcagaaaaagcctacttaaatgctgtg
gaaaagggagattatgcaagtgtcaagaaatccctggaggaagctgaaatttattttaaa
atcaatattaattgcattgatcctcttggaagaactgctctcctcatcgcaattgaaaat
gagaacttggagctcattgaacttcttttaagctttaatgtctatgttggagatgcccta
ttacacgctatcaggaaggaagttgtcggagctgttgagctgttactgaaccacaaaaag
cccagtggcgaaaaacaggtgcctcccatactccttgataagcagttctctgaattcact
ccagacattacaccaatcattttggcagcccatacaaataattatgaaataatcaagctt
ctagttcagaaaggagtctctgtgcccagaccccacgaggtccgctgcaactgcgtggaa
tgcgtctccagctcggacgtggatagcctccgccactcacgctccagactcaacatctac
aaggccttggccagcccctccctcatcgcactgtcaagtgaagatccttttctcacagcc
tttcagctaagttgggagcttcaggagctgagtaaagtggaaaatgaattcaagtcggag
tatgaggagctgtcccgacagtgcaaacagtttgcgaaggacctactggatcagacaagg
agttccagagaactggaaatcatccttaattacagagatgacagtagccttatagaagaa
caaagtggaaatgatctcgccagactcaaattggccataaagtaccgtcaaaaagagttt
gttgctcagcccaattgtcaacaactgcttgcatctcgctggtacgatgagttcccgggc
tggaggagacggcactgggcggtgaagatggtgacgtgtttcatcataggacttcttttt
cccgtcttctctgtgtgctaccttatagctcctaaaagcccactgggactgttcatcaga
aagccatttatcaagttcatctgccatacagcgtcctatttgacttttttgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatatggggagaaattaaacaa
atgtgggatggtggacttcaagattacatccatgattggtggaatctaatggattttgtg
atgaattccttatatttggcaacgatctctttgaaaattgttgcatttgtaaagtacagt
gcacttaatccacgagaatcttgggacatgtggcatcccaccctggtggctgaagcttta
tttgccatcgcaaacatcttcagttccttgcgcctgatctcgctgtttactgcaaattct
catctggggcctctgcaaatatctctgggaagaatgctcctggacattttgaagtttcta
ttcatatactgccttgtgttgctagcattcgcaaacggcctaaatcaattgtatttctat
tatgaagaaacaaaagggttaagctgtaaaggcatacgatgtgaaaagcagaataatgca
ttttcaacattatttgagacactccagtccttgttttggtcaatatttgggctgatcaac
ttatatgtgaccaatgtcaaagcacagcatgaattcactgagtttgtgggtgccaccatg
tttggaacatacaatgtcatctctctggttgtcctactcaacatgttaatagctatgatg
aataactcttaccaactcattgctgaccatgcagatatagaatggaaattcgctagaaca
aagctttggatgagttattttgaagaaggtggtactctgcctactcccttcaatgtcatc
ccgagccccaagtctctctggtacctgatcaaatggatatggacacacctgtgcaagaaa
aagatgaggagaaagcctgaaagttttggaacaataggggtaagaacacagcataggcga
gctgctgataatttgagaagacatcaccaatatcaagaggttatgaggaacctggtaaag
cgatacgttgctgcaatgatcagagatgccaaaactgaagaagggctgactgaagagaac
tttaaggaactaaaacaagacatttccagtttccgctttgaagtcctggggttgctacga
ggtagcaaactgtccacagtacaggcggctcaggccacgaaggagtcctccaattcggcc
gactcggatgagaagagcgataacgagggcagcggcagggacaagcgaaagaacttcagc
ctcttcgacttaaccacgctgatccacccgcgatccgctgccattgcctccgaacgacac
aacataagcaacggctcggccctggtgatgcaagagccccccagggagaagcagagaaaa
gtgaattttgtgaccgatatcaaaaacttcgggttatttcacagacgatccaaacagaac
gctgctgagcaaaatgcaaaccaaatcttctctgtttcagaagaggtcactcgtcaacag
gccgaaagaccaatggagaggagtattcaactggaatctcgagggttggcttcccggggg
gacttgaacatcccgggtctcagtgaacagtgtatattagtagaccaccgagaacggaat
acggactccctgggcttacaggtgggcaagagagtgtgttccttcaagtcggagaaggtg
gtggtggaggacaccgtcccaatcataccaaaggagaagcatgagaaggaagaagactct
agcatagactatgacggaaacctcaccgacacagccagccatgaggattacgtgaccacc
agattgtga
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