Mustela nigripes (black-footed ferret): 132002767 Help Entry 132002767         CDS       T09425                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism mnp  Mustela nigripes (black-footed ferret) Pathway mnp04151   PI3K-Akt signaling pathway mnp04382   Cornified envelope formation mnp04510   Focal adhesion mnp04512   ECM-receptor interaction mnp04518   Integrin signaling mnp04820   Cytoskeleton in muscle cells mnp04926   Relaxin signaling pathway mnp04933   AGE-RAGE signaling pathway in diabetic complications mnp04974   Protein digestion and absorption mnp05146   Amoebiasis mnp05165   Human papillomavirus infection mnp05200   Pathways in cancer mnp05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:mnp00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     132002767 (COL4A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     132002767 (COL4A1)    04518 Integrin signaling     132002767 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     132002767 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     132002767 (COL4A1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     132002767 (COL4A1)   09154 Digestive system    04974 Protein digestion and absorption     132002767 (COL4A1)   09158 Development and regeneration    04382 Cornified envelope formation     132002767 (COL4A1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     132002767 (COL4A1)   09162 Cancer: specific types    05222 Small cell lung cancer     132002767 (COL4A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     132002767 (COL4A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     132002767 (COL4A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     132002767 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:mnp04147]     132002767 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:mnp00536]     132002767 (COL4A1) Exosome [BR:mnp04147]  Exosomal proteins   Exosomal proteins of other cancer cells    132002767 (COL4A1) Glycosaminoglycan binding proteins [BR:mnp00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    132002767 (COL4A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  132002767 NCBI-ProteinID:  XP_059233866 LinkDB All DBs Position 15:complement(82443648..82573487) Genome browser AA seq 1669 aa AA seqDB search MVPRLGFWLLLLAAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGAAGYPGNPGLPGIPGQDGPPGPP GIPGCNGTKGEPGPLGPPGLPGFAGNPGPPGLPGMKGDPGEIIGYVPGTLLKGERGFPGP PGAPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP GVPGQAQVKEKGDFATKGEKGQKGEPGFQGMPGFGEKGEPGKPGPRGKPGKDGEKGEKGS PGFPGDTGYPGPPGREGFKGDKGEAGPPGPPGIAIGPGPLGEKGERGYPGAPGLRGEPGP KGFPGLQGQPGPPGFPVPGQIGAPGFPGERGEKGERGFPGTSLPGPSGRDGLPGPPGPPG PPGQPGHTNGIVECQPGPPGEQGPPGIPGQPGLTGEIGEKGQKGDSCLICDTAGLRGPPG PQGPPGEIGFPGQPGAKGDRGFPGRDGLEGLPGPQGAPGLMGQPGAKGEPGEIYFDARLK GDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDT GPPGPPGFGLPGPVGDKGQAGFPGNPGSPGQPGPKGEAGKVVPLPGPPGAQGLPGAPGFP GPQGDRGFPGTPGRPGLPGEKGTVGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNG LPGNPGVPGQKGEPGVGLPGLKGLPGIPGIPGTPGEKGNVGGPGVPGEHGAVGPPGLQGL RGDPGPPGLQGPRGAPGAPGVGPPGAMGPPGGQGPPGSSGLPGVKGEKGFPGFPGLDMPG PKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGPKGEMGVMGTPGQPGSPGPAGLPG LPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDEVHMGSMKGQKGDQGEKGQTG PTGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPG TPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGVTGFPGSPGE KGEKGSAGIPGVPGSPGPKGSPGSVGYPGSPGLPGEKGDRGLPGSDGIPGSKGEAGLPGK PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGEKGSKGDVGFPGQAGSP GVPGAKGEQGFMGPPGPQGQPGLPGAPGHAVEGPKGDRGPQGQPGLPGLPGPVGPPGLPG LDGLKGDKGNPGWPGAPGTPGPKGEPGFQGLPGIGGSPGITGSKGDMGPPGVPGFQGQKG LPGLQGIKGDQGDQGFPGSKGLPGPPGPPGPYDIIKGEPGLPGPEGPAGVKGLPGPPGPK GQQGVTGSVGLPGPPGVPGFDGAPGQKGETGPYGPPGPRGFPGPPGPDGLPGSMGPPGTP SVDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM PFLFCNINDVCNFASRNDYSYWLSTPEPMPMSMAPVAGDNIRPFISRCAVCEAPAMVMAV HSQTIQIPPCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atggtgccccggctcggcttctggctgctgctgctggccgccgccctcctgctccacgag gagcgcagccgggccgctgcgaagggtggttgtgccggctctggctgtgggaagtgtgac tgtcatggagtgaagggacagaagggcgaaaggggcctcccagggttgcaaggtgtcatc gggtttcctgggatgcaaggacccgaggggccgcaggggccaccaggacaaaagggtgac actggagaacccgggctgcccggaacgaaagggacaagaggacccccaggagcagcgggt taccccggaaacccaggactgccgggtattcctggccaagacggtccccccggtcctcca ggtatccccggatgcaacggaacaaagggtgagccagggcctctggggcccccgggtttg cctggattcgctggaaatcccgggccgccagggttgccaggaatgaagggggatccgggt gaaatcatcgggtatgtgcctgggaccctgttgaaaggtgaaagaggatttcctggaccc ccaggagcaccaggctcgccaggactgccaggcctccagggtcctgtgggccctccagga tttaccggaccaccaggtcctccaggccctcctggccctccaggtgaaaaggggcaaatg ggcttaagttttcaagggccaaaaggtgataagggtgaccagggggtcagtgggcctccg ggagtaccaggacaagctcaagttaaagaaaaaggagactttgccaccaaaggagaaaag ggtcaaaaaggtgaacctggatttcagggaatgccagggtttggagagaaaggggagccc ggaaagccagggccccgaggaaaacctggaaaagatggcgaaaaaggagaaaaagggagt ccaggctttccaggcgacacggggtacccgggacccccaggccgcgaaggtttcaaggga gacaaaggtgaagcaggtcctccaggcccacccggaattgcaatcggcccaggacccttg ggagagaaaggagagcgggggtaccccggcgccccagggttgagaggagagccaggcccc aaaggtttcccgggattgcaaggccagccaggccctccaggctttccggtaccagggcag atcggagctcctggattcccaggggaaagaggcgagaaaggtgaacggggctttccgggc acgtctttgccaggaccaagcggacgggatgggctcccgggcccccctgggcctcccggg ccccctggacagccaggccacacaaatggaatcgtggaatgccagcctgggccgccaggg gaacagggcccccccggaattccagggcagccagggctgacgggcgagattggagaaaaa ggtcagaaaggagacagctgcctcatctgtgacacagcaggacttcgtgggccccctggg ccgcagggccccccgggagaaataggtttcccgggacagccaggggccaagggcgacaga ggctttcctggcagagatggtctggaaggattgcctggcccacaaggcgcaccagggctg atgggccagccgggagccaagggagagcctggcgagatttacttcgacgcgcggctcaaa ggagacaaaggagaccccggctttccaggacagcccgggatgccaggcagagcagggtct cctgggagagatggccatccagggctgcccggccccaaaggctccccggggtcggtagga ttgaaaggagagcgtggcccccccggaggagttggattccccggcagtcgcggtgacacc ggccctccagggcctccagggtttggccttcctggccccgttggcgacaaaggacaagcg ggttttcccgggaaccctggctccccaggccagccaggtcccaagggcgaagcaggaaaa gttgtgcccctaccgggtccccctggagcacaaggacttccgggagccccaggcttccct gggccacaaggtgaccgaggttttcctggaaccccaggaaggccgggcctcccgggagag aagggcactgtcggccagcccggaatcggatttccagggccccctggccccaaaggtgtt gacggcttgcctggggacgtggggcctcctggcagtccaggccgcccggggttcaatggc ttacccggcaatccaggggtgcccggccaaaagggggagccgggagttggtctaccagga ctcaaaggcttgccaggcattcccggcatccccggcacacccggggagaaggggaacgtc gggggaccgggcgtcccgggagagcacggtgctgtcggccccccaggccttcagggactc cgaggtgacccagggccacctggattacaaggtcccagaggagctccaggagcccctgga gtcggcccgcccggcgcgatgggaccccctggaggacagggaccaccagggtcctcaggc cttcccggagtgaaaggagagaagggcttccccggatttccaggcctggacatgccaggc cccaaaggagataaagggtcccaagggctcccaggcctgacgggacagtcggggctccct ggcctccccggacagcagggcacacccggcgttcctgggtttccaggtcccaagggggag atgggcgtcatggggaccccagggcagcccggctccccaggaccagcgggcctgccagga ttgccaggagagaaaggggaccacggcttcccgggctcctcggggccccggggtgaccct ggcttcaagggggacaaaggagacgtgggtctccccggcaagccgggctccatggatgag gtgcacatgggcagcatgaagggccagaagggagaccaaggagagaaagggcagactgga ccaaccggcgagaaggggtcccgcggcgaccccggaaccccaggagtgcctggaaaggat ggccaggccgggcagcccgggcagccagggcctaaaggggacccaggcataggcggaacc ccgggtgctccaggtctccctggacccaaaggatcggttggcggaatgggcctgccggga acgcccggagaaaagggggtgcctggaatccccggcccgcagggcgtccctggcttaccc ggggagaagggagcaaaaggagagaaaggccaggcgggcctgcctggcattggaattccg ggccgtcctggggacaagggagatcaaggggtcacaggctttccggggagtcctggagag aagggagagaaaggaagcgctggcatcccgggggtccccggctccccaggccccaaagga tcgccggggagtgtcggctacccaggaagccctgggttgcccggagaaaagggggaccga ggtctcccaggatcggacggcattcccggcagcaagggagaagcaggtcttcctgggaag cctggccccacgggccccgctggccagaaaggggagcccggcagtgacggaatcccgggg tcggcgggagagaagggtgaaccaggtctgcccggaagaggattcccagggtttccagga gccaaaggagagaaaggttcaaagggcgacgtgggtttcccgggacaagccggcagccca ggcgtccccggggccaaaggagagcaaggattcatgggtcccccggggcctcaaggacag ccgggcttacctggagctccaggccacgctgtggagggacccaagggagaccggggccca cagggtcagcccggcctgccagggcttccgggacctgtggggcctccagggctccctggg cttgacggactcaaaggtgacaaaggaaacccaggctggccgggggcccccggaacccca gggcccaagggagagccaggattccagggcctgcctgggattggtggctcgccagggatc acgggctcgaagggtgacatggggcctccgggagtgccgggatttcaaggtcagaaaggc ctccctggcctgcagggaataaagggcgatcaaggtgaccaaggcttccctggaagtaaa ggccttcccggtcccccagggcccccgggaccctacgacatcatcaaaggggagccaggg cttcctggccccgagggtcctgcaggtgtaaaggggctcccagggcctccaggccccaaa ggacagcaaggcgtgacgggatccgtgggcttacccggaccgcctggtgttcctggtttt gacggcgcccctggccagaaaggagagacgggaccctacggcccccctggtccacgaggg ttcccgggcccgccaggccccgacggcttgccaggatccatgggccccccgggcaccccg tctgtggaccacggcttccttgtgaccaggcacagtcagacaacagatgacccacagtgt cctcctgggaccaaaattctgtaccacgggtactccttgctctacgtgcaaggcaacgaa cgggcccacggccaggacctaggcacggccgggagctgcctgcgcaagttcagcacgatg cccttcctcttctgcaacatcaacgacgtgtgcaactttgcgtcccggaacgactactcc tactggctgtccacgcccgagcccatgcccatgtccatggcgcccgtcgccggggacaac atccggccgttcatcagcaggtgtgcggtgtgtgaggcgccagccatggtgatggccgtg cacagccagaccatccagatcccaccgtgccccagcggctggtcctccctctggattggc tactcctttgtcatgcacaccagcgccggcgctgaaggttccggccaggccctggcatcc cccggctcttgtctggaggagttcaggagtgcgccgttcatcgagtgccacggccgcggg acatgcaactactacgccaacgcttacagcttctggcttgccacgatcgagagaagtgag atgttcaagaagcccacgccgtccaccttgaaggccggggagctgcgcacacacgtcagc cgctgccaagtctgcatgaggagaacgtaa

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