Mustela nigripes (black-footed ferret): 132002862
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Entry
132002862 CDS
T09425
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
132002862 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnp04131
]
132002862 (SPATA13)
Membrane trafficking [BR:
mnp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
132002862 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
132002862
NCBI-ProteinID:
XP_059234066
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All DBs
Position
15:complement(4996085..5145538)
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AA seq
1439 aa
AA seq
DB search
MGWGCDPRRGGGVAWESGCRGAGGIQRRAFSGSRPARRQPRGSAREQRLLREPGVLRAPW
DPDRPSVAGTSWILWLWRLRRVGAARGPSCVSFHEKDRRDSVSVASELEGLPESAWFQLW
LTWCGNLHTSSRKAVATSEEPDVHSRCESQAGSSLGDEGLHPGPVDTDVQVGLNPTALWP
RTHSPENMTTAQNGHGQLAAIPCSVSDPKDPKMVTYPACQNGGCSSSYCGEAEAQEARLS
PAKLMRLFSVSRKRTGTNPERPRSMVLMGNSSTWNALASFRKMGSFKKLKSSVLQGIQNR
EASDVPREDPPERDPGKPISNGAAIGMQTSRCPNSGPASDAPKAGPGGVSDCSDPEEADD
AFQRSTHRSRSIRRAYGLGRISLLDGDKHPGSQNHVRPLAPGPQEPTVCEILVKDSENNS
IIYRKSKSTDNLNFLKKSSFKRKSTSNLMDLKGAQEKPAPRRTLSSSSADSEKFGGSERR
TKRWKSPLRAKDFDRVLRFVSSATDAAWRKESPRSGAPSPGEASQRLQVHSRLHDAYSRR
VSTSAEREWRRCAGAHAGSGCGSPGAPSPRVDVDTAVFPLEAPGSWAAESARPCAASASS
SPVAQDSEERRAGGRFTFEAEQPLIPPRPTTPKPPSPHSPGAGSAACPNSLSALSLSSVD
SEERAEGPVTSRDSVQAAYDKGREDSAGSHPQLSPHLASGAEERREEVVTEESWRRDSSR
DEERTESQRITRRKWGSGRRARPRPLSDYGQLANRSLSIPEDSVAVDPQKEDTVEGDHLP
NMASTDTTDQSDTADQSAAVGCPKGSWRRRPISVIGGVSFYGNSPTEEIESLLTQPAARP
PVPAHRVLPYKAVSARFRPFTFSQSTPIGLDRVGRRRQMRASNVSSDGGTESAALVDDNG
SEEDYSYEDLCQANPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDV
IQVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEELSENSSSTQGEEHEEDAGKNHHKH
SESKHQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTVAQLATIFGNIEDIY
KFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACAELSNLMKQGR
YRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTPEHSDYNNIKAAYEA
MKNVACLINERKRRLESIDKIARWQVSIVGWEGLDILDRSSELIHSGELTKVTRHGKSQQ
RTFFLFDHQLVSCKKDLLRRDVLYYRGRTDMDDVELVDLEDGRDKDWNLSVKNAFKLVSR
TTDEVHLFCARKQEDKVRWLQACEDERRRVREDREMGMEISENQKKLAMLNAQKAGHGKS
KGYSGCPVAPPHQNLHPLHQRHVTVPTSVPQQQVFALAEPKRKPSLFWHTFNKLTPFKK
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgggctgggggtgtgacccgaggcggggtgggggcgtggcctgggagtccggctgccgc
ggcgcgggcgggattcagcgccgcgctttctctggcagccgccccgcccgccgccagccc
agaggcagcgcacgggagcagaggcttctgcgagagcccggcgtgctccgagctccgtgg
gacccggaccggcccagtgtcgcggggacgtcttggatcctctggctttggaggctccgt
cgagtgggagccgcacgaggtcccagctgcgtctcatttcacgagaaagaccgccgggac
tcggtgtctgtcgcctctgaattggaaggtttgccggagtcggcttggttccagctgtgg
ttgacgtggtgcgggaatttgcatactagctccaggaaggcagtggccaccagtgaagag
cctgatgtgcacagcaggtgtgaaagccaggctggcagcagcctgggagatgaaggtctg
catccggggcctgtggacacggatgtgcaggtgggtttgaaccctactgccttgtggcca
cggactcacagtcccgagaacatgacaacagcccagaatggccacgggcaacttgctgca
atcccgtgttctgtctctgatcccaaagaccccaaaatggtgacttaccccgcgtgtcag
aatggaggatgcagcagcagctactgcggggaggcagaagcccaggaggccagactcagc
cctgctaagctcatgcgcctcttctccgtgagcaggaagaggactggcaccaacccggag
aggccccgctccatggtcttgatgggaaattcctctacctggaatgcccttgcctccttt
cggaaaatgggatctttcaaaaaattgaagtcctccgtccttcaaggaattcagaaccga
gaggcgtcagatgtgccaagggaagaccctccagaacgtgacccggggaaacccatctca
aacggtgctgcaatcggaatgcaaaccagcaggtgccccaactcgggaccagcaagtgat
gccccgaaggcagggccagggggcgtgtcggactgctccgaccccgaggaggccgacgat
gccttccagaggagcacccatcggtcccgaagcatccgccgtgcctatggcctgggccgc
atcagcctcctggatggtgacaagcatccagggtcccagaaccacgtccggccgctggcc
cccggcccccaggagcccaccgtgtgtgagatcctcgtgaaagactccgagaacaacagc
atcatctacaggaaaagcaagagcacggataacttgaactttctgaagaagagctccttc
aagcggaagtccacctcaaatctcatggacctcaagggggcgcaggaaaagcccgcgccc
cgacggacgctaagcagttcatcagccgactcggagaagttcggtggctccgagaggagg
acgaagcgctggaagagcccactgcgggccaaggactttgaccgcgtcctgaggtttgtg
agcagcgccacggacgcggcctggaggaaagagagtccccggagcggggcgccctcgccg
ggcgaggcgagccagaggctgcaggtgcacagccggctgcacgacgcttactcccgccgc
gtgtccaccagcgcggagcgcgagtggaggaggtgcgcgggcgcgcacgccggctccggc
tgcggctcgcccggggccccgagcccccgggtggacgtggacaccgccgtctttcctctg
gaagccccaggctcctgggcggcagagagtgcccgtccttgcgccgccagcgcctcgtcg
agtccggttgcccaggactccgaggaacgccgagctggcggccggtttacgttcgaagcc
gagcagccgctcatccctccaaggcctaccacgcccaagccccccagcccccacagcccc
ggcgcgggaagtgccgcgtgtcccaacagcctcagcgcgctgtccctcagctcagtggac
agtgaagaaagggcagaggggcctgtgacctcccgggattctgtgcaagccgcatatgac
aaaggccgtgaggacagcgccggcagccaccctcagctgagcccccacctggcgtcaggt
gcagaagaaaggagggaggaggttgtgacagaggaatcctggaggcgggactcatcccgg
gatgaagaaaggaccgagtctcagaggatcaccaggaggaaatggggttctgggagaaga
gcaaggcctcgacctctctccgactatggacagctggccaaccggagtctgtccattcct
gaagactcagttgctgtagacccccagaaagaagacactgtggagggagaccacctgccc
aacatggcctccacagacactacagaccagagcgacactgcagaccagagcgctgctgtg
ggctgccccaaaggaagctggagaagacgccccatctctgtgataggcggtgtcagcttc
tatgggaacagcccgacagaggaaatcgagagtcttctaacccaaccagcagccaggcct
cccgtgccagcccaccgggtgctgccctacaaggcggtttcggcccgtttccggcccttc
accttctcccagagcacccccattgggctggaccgcgtgggacgccggcggcagatgcga
gcttccaatgtctcttcagatggaggtactgagtccgcggccttagtggatgacaacggc
agtgaggaggactatagctatgaagacctgtgtcaggccaaccccagatacctacagcca
ggcggggagcagctggccatcaacgagctgatcagcgatggcagtgtggtctgtgcagaa
gccttatgggaccacgtgaccatggatgaccaggaactgggcttcaaggcaggagatgtc
atccaggtcctggaagcctctaacaaggactggtggtggggccggaatgaggacaaggag
gcctggttccccgcaagctttgtcagattgcgtgtcaatcaggaggagctgtcggagaat
tccagcagcacccagggcgaggagcatgaggaagatgccggtaagaaccaccacaaacac
tcggagagcaagcaccagatgaggaccaatgtcatccaggagatcatgaacactgagcgc
gtgtacatcaagcacctcaaggacatctgtgagggctatattcgacagtgtcgcaagcac
accggaatgttcactgttgcacaactagccaccatttttggaaacattgaagatatttac
aaattccaaagaaagttcctgaaagaccttgagaagcagtacaataaagaggaacctcat
ttaagtgaaataggatcctgctttcttcaacatcaagagggcttcgccatctattccgag
tactgtaacaaccacccaggcgcctgcgcggagctgtccaacctgatgaagcagggcaga
taccgacacttcttcgaggcttgccgcctgctccagcagatgatcgacatcgccatcgac
ggcttcctcctcacgccagtgcagaagatctgcaagtaccctctgcagctggccgagctg
ctcaagtacaccacgcctgagcacagtgattacaacaacataaaggcagcctacgaagcc
atgaagaacgtggcgtgtctgatcaatgagcgcaagcgcaggctggaaagcatagacaag
atagcgcggtggcaggtgtccatcgtaggctgggaggggctggatatcctagatcgcagc
tctgagctgatccattccggggagctgaccaaggtcaccaggcatggcaagagccagcag
cggacgttcttcctattcgaccaccagctggtgtcctgcaagaaggacctgctgcgcagg
gacgtgctctactacaggggccgcacagacatggatgacgtggagctagtggacctggag
gacggccgggacaaggactggaacctcagcgtgaagaacgccttcaagctcgtcagcaga
accacggacgaggttcatctgttctgtgccagaaagcaagaggacaaagtgcggtggcta
caggcctgcgaggacgagaggcggcgcgtgcgggaggaccgcgagatgggaatggaaatt
tcagaaaatcaaaagaaactcgccatgttaaatgctcaaaaggcgggacatggaaagtca
aaaggctacagcggatgccccgtggccccgccgcaccagaacctgcacccccttcaccag
cgccacgtcaccgtgcccaccagcgtcccccagcagcaggtgtttgccctggcagagccc
aagaggaagccgtcgctcttctggcacacgttcaacaaactcacgcctttcaagaaatga
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integrated database retrieval system
