Mustela nigripes (black-footed ferret): 132003123
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Entry
132003123 CDS
T09425
Symbol
PCDH18
Name
(RefSeq) protocadherin-18
KO
K16499
protocadherin delta 2
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mnp04515
]
132003123 (PCDH18)
Cell adhesion molecules [BR:
mnp04515
]
Cadherins
Protocadherins
132003123 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
PAH
Syndecan
Cadherin_C_2
MPS-4
DUF3418
Motif
Other DBs
NCBI-GeneID:
132003123
NCBI-ProteinID:
XP_059234403
LinkDB
All DBs
Position
1:complement(197019278..197033355)
Genome browser
AA seq
1134 aa
AA seq
DB search
MCQMNAKMHFRFGFALLMLSFSYDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLVKLPN
PSTVRFRAMQRGNSPLLVVNEDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRSVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
FFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSN
DNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKID
SERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLMS
PGKEEISYIFEGDPIDTFVALVGVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTIIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFAISENNSP
GAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQ
ITFVVEARDGGSPKQLASNTTVVLTIIDENDNVPVVIGPALRNNTAEISIPKGAESGFHV
TRIRAIDRDSGVNAELSCSILAGNEENIFLMDPRSCDIHTNVSMESVSYTEWELSVIIQD
KGNPQLHTKVLLKCVIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTMNGTLPIRSHHRSSPS
SSPTLERGQMGSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQG
QYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGF
SDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQQ
HPHQSLEDDTQPADSGEKKKSFSTFGKDSPNDEDSGDTSTSSLLSEMSSVFQRLLPPSLD
TYAECGEGDRSNSLERRKGALPAKTAGYPQGVAAWAASTHFQNPTNSSGPPLGTHSSVQP
SSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgtgccaaatgaatgctaaaatgcactttagatttggttttgcactcctgatgctatct
ttcagctacgatgtactgggcaagaatctgaaatacaggatttatgaggagcagagggtt
ggatcagtaattgcaagactatcagaggatgtggctgatgttttagttaagctacctaat
ccttccactgttcgttttcgagccatgcaaaggggaaattctcctctccttgtggtcaat
gaggataatggagaaatcagcataggggctaaaatcgaccgtgaacaactatgccagaaa
aacttgaactgttccatagagtttgatgtgatcactctacccacggagcatctgcagctt
ttccatattgaagtcgaagtgctggatattaatgacaattctccccagttttcaagatct
gtcatacctattgagatatctgagagtgcagcagtcgggactcggatccccttggacagt
gcatttgatccagatgtgggggaaaattccctccacacatactctctctctgccaatgat
ttctttaatattgaggtccggaccaggactgatggcgccaagtatgcagaactcatagtg
gtgagagagctcgatcgggagctgaagtcaagctatgagcttcagctcactgcctcagac
atgggggtgcctcagaggtccggctcatccatcctaaaaataagcatttcagactccaat
gacaacagccctgcttttgagcagcagtcttatataatacaactcttagaaaactccccc
gttggcactttgctccttgatctgaatgccactgatccagatgagggcgctaatgggaag
attgtatattccttcagcagtcatgtgtctcccaaaattatagagacttttaaaatcgat
tcagaaagaggacatttgactcttttcaagcaagtggactatgaaatcaccaaatcctat
gagattgatgttcaggctcaagatttgggtccgaattcaatcccagctcattgcaaaatt
ataattaaggttgtggatgttaatgacaataagcctgaaattaacataaacctcatgtcc
cctggaaaagaagaaatatcttatatctttgaaggggatcctattgacacgtttgtggct
ttggtcggggttcaggacaaggattctgggctgaatggagaaatagtttgtaagcttcac
ggacatggtcactttaaacttcagaagacttacgaaaacaattatttaatcttgacgaat
gccacactggatagagaaaagagatctgaatacagtttgaccataatcgctgaggacaag
gggacacccagtctttctacagtaaaacattttactgttcagattaatgatataaatgac
aatccaccccacttccagagaagtcgctatgaatttgcaatctcagagaataactcgcca
ggggcctatatcaccactgttacagccacagatcctgatcttggagaaaacgggcaagtt
acatacacaattttggagagttttatcctgggaagttccataactacatatgtaaccatt
gacccatcgaatggagccatctatgccctcagaatctttgatcatgaggaagtgagtcag
atcacttttgtggtggaagcaagagatggaggaagtccaaagcaactcgcaagcaatacc
acagttgtgctcaccatcattgatgaaaatgacaacgtccctgtggttatagggcctgcg
ctgcgcaataatactgcagaaatctccatacccaaaggggctgaaagtggctttcatgtc
acgagaataagggcaattgacagagactctggtgtgaatgctgaactcagttgctccatc
ctagcagggaatgaggagaatatctttttaatggatccacgatcatgtgacatccatacc
aatgtgagcatggaatctgtttcctacacagaatgggagctctcggttatcatccaggac
aaaggcaatcctcagctgcataccaaagtcctcctgaagtgtgtgatctttgaatatgca
gagtcagtgacaagtacagccatgacctcagtaagccaggcatctttggatgtctccatg
attataattatttccttaggagcaatttgtgcagtgttgttggttattatggtgctgttt
gccacgaggtgtaaccgagaaaagaaggacactagatcctacaactgcagggtagcggaa
tccacttaccagcaccacccaaaacggccatccaggcagattcacaaaggggacattacc
ttggtgccaaccatgaacggcactctgcccatcagatctcatcacaggtcatctccatct
tcgtctccaaccttggaaagagggcagatgggcagccggcagagtcaccacagtcaccag
tccctcaacagtttggtgacaatctcatccaaccacgtgccagagaatttctcattagaa
ctcacccatgccactcctgctgttgaggtctcccagcttctttcaatgcttcaccagggg
cagtatcagccaagaccaagttttcgaggaaacaaatattccaggagctatagatatgcc
ctccaagacatggacaaatttagcttgaaagacagtggccgtggtgacagtgaagcagga
gacagtgattacgatttggggcgagattcaccaatagataggctgctgggtgaaggattc
agcgacctgtttcttacagatggaagaattccagcagctatgcggctttgcacggaggag
tgcagggtcctggggcactccgaccagtgctggatgccaccgctgccctcgccgtcctcc
gactatcggagtaacatgttcattccgggggaggagttcccagcacaaccgcagcagcag
catccgcatcagagtcttgaggacgacacccagcccgcggattctggggagaaaaagaag
agtttctccacctttgggaaggactccccgaacgacgaggactccggggataccagcaca
tcctctctgctctcggaaatgagcagcgtcttccagcgcctcttgcccccttccctggac
acctacgcggagtgcggcgagggggatcggtccaactctctggagcgccgcaagggggcg
ctgcccgccaagactgcgggttatccgcaaggcgtggccgcctgggccgccagtacgcat
tttcaaaaccccaccaacagctcgggtccccctcttggaactcactccagtgtgcagcct
tcctccaaatggctgccggccatggaggagatccctgaaaactatgaagaagatgatttt
gacaatgtgctcaaccacctcaacgacgggaaacacgaactcatggatgccagtgagcta
gtggcggagattaacaaactgcttcaagatgtccgccagagctag
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