Mustela nigripes (black-footed ferret): 132003406
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Entry
132003406 CDS
T09425
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04082
Neuroactive ligand signaling
mnp04721
Synaptic vesicle cycle
mnp04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
132003406 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
132003406 (SLC6A4)
04721 Synaptic vesicle cycle
132003406 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mnp02000
]
132003406 (SLC6A4)
Transporters [BR:
mnp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
132003406 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
132003406
NCBI-ProteinID:
XP_059234823
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Position
16:complement(43211761..43245238)
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AA seq
630 aa
AA seq
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METTPLNSQKELPACKDKDDCQENGVLQKGVPVPEDKVESGHISNGYSAVPSPGAADDTQ
HALPAATTALVAEPHQGERETWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCTNSWNTGNCTNYFSGNNVTWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLTLCIMGIFAVIYFSIWKGVKMSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLGVVITCFFGSLAT
LTFGGAYVVKLLEEYATGPAVLTVVLIEAVAVYWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPTYIAYRLIVT
PGTFKERIIKGITPETATEIPYGDIHLNAI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacgcccttaaattcccagaaggagctgcccgcgtgtaaggataaagacgat
tgtcaggaaaatggggttctacagaagggggtccccgttcctgaggacaaggtggagtct
ggccacatctccaatgggtactcggcggtgccgagccctggtgccgcagacgacactcag
cacgcccttccagctgccaccactgctctagtcgccgagcctcaccaaggggagcgggag
acctggggcaagaagatggatttcctcctgtcggttattggctatgcggtggacctgggc
aacgtctggcgctttccctacatctgctaccagaatggagggggggctttcctcctgccc
tacacgatcatggccattttcggggggatcccactgttctacatggagcttgcactgggc
cagtaccaccgaaacggatgcatttccatatggaggaaaatctgcccgattttcaaaggg
atcggctacgccatctgcatcatcgccttctacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctccttcaccgaccagctgccctggaccagctgc
accaactcctggaacaccggcaactgcaccaactatttctcggggaacaacgtcacctgg
acgctgcactcgacgtcccccgctgaagaattttacacgcgccatgtcctgcagatccat
cggtctaagggacttcaggacctggggggcatcagctggcagctcaccctctgcatcatg
ggcatctttgctgttatctacttcagcatctggaaaggtgtcaaaatgtctggcaaggtg
gtatgggtgacagccaccttcccttatatcatcctttctgtcctgctggtaaggggggcc
accctccccggagcctggaggggtgttctcttctacttgaagcccaactggcagaaactg
ctggagacgggggtgtgggtcgatgctgccgctcagatcttcttctctcttggtcctggc
tttggggtcctgttggctttcgctagctacaacaagttcaacaacaactgttaccaagac
gccctggtgaccagcgtggtgaactgcatgacgagctttgtttcgggatttgtcatcttc
acggtgctcgggtatatggccgagatgcggaatgaggatgtgtccgaggtggccaaagat
gcaggccccagcctcctcttcatcacgtatgcagaagccatagccaacatgccagcatcc
actttctttgccatcatcttcttcctgatgttaatcacgctgggcctggacagcaccttt
gcaggcttggagggggtgatcacagctgtgcttgacgagtttccgcacatctgggccaag
cgccgggagtggtttgtgcttggtgtcgtcattacgtgcttctttggctccctggccacc
ctgactttcggaggggcctacgtggtgaagctgctagaggagtacgccacgggccctgcg
gtgctcaccgttgtcctcatagaggctgtggctgtgtactggttttatggcatcactcag
ttctgcagtgacgtgaaggaaatgctcggcttcagccctgggtggttttggaggatctgc
tgggtcgccatcagccctctctttctcctgttcatcatctgcagttttttgatgagcccg
ccccagctccgacttttccagtataactaccctcagtggagtatcatcctgggttactgc
atagggacctcgtctttcatctgcatccccacatacatagcgtaccggctgatcgtcact
ccagggacatttaaagagcgtattattaaaggtatcactccagaaacagcgacagaaatt
ccctatggggacatccacttgaatgccatataa
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