KEGG   Mustela nigripes (black-footed ferret): 132003926
Entry
132003926         CDS       T09425                                 
Symbol
CASC3
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
mnp  Mustela nigripes (black-footed ferret)
Pathway
mnp03013  Nucleocytoplasmic transport
mnp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mnp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    132003926 (CASC3)
   03015 mRNA surveillance pathway
    132003926 (CASC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mnp03019]
    132003926 (CASC3)
Messenger RNA biogenesis [BR:mnp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     132003926 (CASC3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 132003926
NCBI-ProteinID: XP_059235819
LinkDB
Position
16:complement(21424603..21445377)
AA seq 701 aa
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHDPDDIKPRRIRKPRFGSPPQRDPNWIVERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSTPRNYSRSGGFKEGRAGFRPMEAGGQHGGRSGETVKHESSYRSRRLEQTPAR
DPSPEADAQVLGSPEKEEATSEIPAAAPDTVPPAPDRPVEKKSYSRARRTRIKAGDAVKI
AEEVPPPPEGLNPAPQVPETTPPPPAKTGNWEAPVDSTTSGLEQDVAQLNITEQNWSPGQ
PSFLQPRELRGMPNHIHMGAGPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHISI
MEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTAAPLPNPGLYPP
PVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVYG
GVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq 2106 nt   +upstreamnt  +downstreamnt
atggcggatcggcggcggcagcgggcttcgcaggacacggaggacgaggagtctggtgct
tcgggctcggacagcggcggctccccggcgcggggcggcgggagctgtagcggtagtgct
ggaggcggtggcagcggctctctgccttcccagcgcggaggccgagcgggggcccttcat
ctgcggcgggtggagagcgggggcgccaagagcgctgaggagtcggaatgtgagagtgaa
gatggcatcgagggcgatgctgtgctgtcggattatgaaagtgcagaagactctgaaggt
gaagaaggggaatacagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgctgctaattcttcagcaaaagaagagaaaggagaggaaaagcctgacaccaaaggc
actgtgactggagagaggcagagtggggatggacaggagagcacagaacctgtggagaac
aaagtgggtaaaaagggccctaagcatttggatgatgatgaagaccggaagaacccagca
tacataccccggaaagggcttttctttgagcatgatcttcgaggacaaacgcaggaggag
gaagtcagacccaaggggcgtcagcgaaagctctggaaggatgagggtcgttgggaacat
gacaaattccgggaagatgaacaagctccaaagtcccgacaggagctcattgccctttat
ggctatgatatccgctcagctcacgatcccgatgacatcaaaccccgaagaatccggaag
cctaggtttgggagtcctccgcaaagagatccaaactggattgttgagcgaccaaacaag
tcccatcgccatcagggtcctgggggcaccctaccaccaaggacatttatcaataggaat
gctgcagggactggccgaatgtctactcccaggaattactctcgatctgggggcttcaag
gaaggccgtgctggttttaggcctatggaggctggtgggcagcatggtggtcggtctggt
gagactgttaaacatgaaagcagttaccgatcacggcgcctagagcagactcctgcacgg
gacccatctccagaagctgatgctcaagtgcttggcagtccggagaaggaagaggcgacc
tcagagataccagctgctgctcccgacactgtaccaccagcccctgacaggcctgttgag
aagaaatcctactcccgggcaagaagaaccagaatcaaagctggagatgcagtcaagatt
gcagaagaggtgccccctccacccgaagggctaaacccagcacctcaagtcccagaaacg
acccctcctccacctgctaagactggaaactgggaggctccagtggattctacaacaagt
ggacttgagcaagatgtggcacaactaaatataacagaacagaattggagtcccgggcag
ccttcattcctgcaaccacgtgagcttcgtggtatgcccaaccacatacatatgggagca
ggacctcagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaacgctat
tcatctcagcggcaaagacctgtgccagagccccctgctcctcctgtgcacatcagtatc
atggagggacattactatgatccactgcagttccagggaccaatctatacccatggtgac
agccctgccccactgcctccccagggcatgattgtgcagccagaaatgcaccttccccac
ccaggtttacatccccaccagactgcggcacctctgcctaatccaggcctctatccccca
ccagtgtccatgtctccagggcagccaccacctcagcagttgcttgctcctacttacttt
tctgctccaggcgtcatgaactttggtaatcccagttacccttatgctccaggggcactg
cctcccccaccaccacctcatctgtatcctaatacgcaggccccatcacaggtatatgga
ggagtgacatactataaccccgcccagcagcaggtgcagccaaagccctccccaccccgg
aggactcctcagccagttaccatcaagcccccaccacctgaggttgtaagcaggggttcc
agttaa

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