Mustela nigripes (black-footed ferret): 132003926
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Entry
132003926 CDS
T09425
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03013
Nucleocytoplasmic transport
mnp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132003926 (CASC3)
03015 mRNA surveillance pathway
132003926 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132003926 (CASC3)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132003926 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
132003926
NCBI-ProteinID:
XP_059235819
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All DBs
Position
16:complement(21424603..21445377)
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AA seq
701 aa
AA seq
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MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHDPDDIKPRRIRKPRFGSPPQRDPNWIVERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSTPRNYSRSGGFKEGRAGFRPMEAGGQHGGRSGETVKHESSYRSRRLEQTPAR
DPSPEADAQVLGSPEKEEATSEIPAAAPDTVPPAPDRPVEKKSYSRARRTRIKAGDAVKI
AEEVPPPPEGLNPAPQVPETTPPPPAKTGNWEAPVDSTTSGLEQDVAQLNITEQNWSPGQ
PSFLQPRELRGMPNHIHMGAGPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHISI
MEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTAAPLPNPGLYPP
PVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVYG
GVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcggcggcggcagcgggcttcgcaggacacggaggacgaggagtctggtgct
tcgggctcggacagcggcggctccccggcgcggggcggcgggagctgtagcggtagtgct
ggaggcggtggcagcggctctctgccttcccagcgcggaggccgagcgggggcccttcat
ctgcggcgggtggagagcgggggcgccaagagcgctgaggagtcggaatgtgagagtgaa
gatggcatcgagggcgatgctgtgctgtcggattatgaaagtgcagaagactctgaaggt
gaagaaggggaatacagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgctgctaattcttcagcaaaagaagagaaaggagaggaaaagcctgacaccaaaggc
actgtgactggagagaggcagagtggggatggacaggagagcacagaacctgtggagaac
aaagtgggtaaaaagggccctaagcatttggatgatgatgaagaccggaagaacccagca
tacataccccggaaagggcttttctttgagcatgatcttcgaggacaaacgcaggaggag
gaagtcagacccaaggggcgtcagcgaaagctctggaaggatgagggtcgttgggaacat
gacaaattccgggaagatgaacaagctccaaagtcccgacaggagctcattgccctttat
ggctatgatatccgctcagctcacgatcccgatgacatcaaaccccgaagaatccggaag
cctaggtttgggagtcctccgcaaagagatccaaactggattgttgagcgaccaaacaag
tcccatcgccatcagggtcctgggggcaccctaccaccaaggacatttatcaataggaat
gctgcagggactggccgaatgtctactcccaggaattactctcgatctgggggcttcaag
gaaggccgtgctggttttaggcctatggaggctggtgggcagcatggtggtcggtctggt
gagactgttaaacatgaaagcagttaccgatcacggcgcctagagcagactcctgcacgg
gacccatctccagaagctgatgctcaagtgcttggcagtccggagaaggaagaggcgacc
tcagagataccagctgctgctcccgacactgtaccaccagcccctgacaggcctgttgag
aagaaatcctactcccgggcaagaagaaccagaatcaaagctggagatgcagtcaagatt
gcagaagaggtgccccctccacccgaagggctaaacccagcacctcaagtcccagaaacg
acccctcctccacctgctaagactggaaactgggaggctccagtggattctacaacaagt
ggacttgagcaagatgtggcacaactaaatataacagaacagaattggagtcccgggcag
ccttcattcctgcaaccacgtgagcttcgtggtatgcccaaccacatacatatgggagca
ggacctcagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaacgctat
tcatctcagcggcaaagacctgtgccagagccccctgctcctcctgtgcacatcagtatc
atggagggacattactatgatccactgcagttccagggaccaatctatacccatggtgac
agccctgccccactgcctccccagggcatgattgtgcagccagaaatgcaccttccccac
ccaggtttacatccccaccagactgcggcacctctgcctaatccaggcctctatccccca
ccagtgtccatgtctccagggcagccaccacctcagcagttgcttgctcctacttacttt
tctgctccaggcgtcatgaactttggtaatcccagttacccttatgctccaggggcactg
cctcccccaccaccacctcatctgtatcctaatacgcaggccccatcacaggtatatgga
ggagtgacatactataaccccgcccagcagcaggtgcagccaaagccctccccaccccgg
aggactcctcagccagttaccatcaagcccccaccacctgaggttgtaagcaggggttcc
agttaa
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