Mustela nigripes (black-footed ferret): 132004147
Help
Entry
132004147 CDS
T09425
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp00260
Glycine, serine and threonine metabolism
mnp00630
Glyoxylate and dicarboxylate metabolism
mnp00670
One carbon pool by folate
mnp01100
Metabolic pathways
mnp01200
Carbon metabolism
mnp01230
Biosynthesis of amino acids
mnp01240
Biosynthesis of cofactors
mnp01523
Antifolate resistance
mnp04981
Folate transport and metabolism
Module
mnp_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
132004147 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
132004147 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
132004147 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
132004147 (SHMT1)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
132004147 (SHMT1)
Enzymes [BR:
mnp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
132004147 (SHMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
132004147
NCBI-ProteinID:
XP_059236256
LinkDB
All DBs
Position
16:47674158..47698904
Genome browser
AA seq
483 aa
AA seq
DB search
MAEVNGTHKDADLWSSHNKMLAQPLKDGDTEVYDIIKKESNRQRVGLELIASENFASRAV
LEALGSCLNNKYSEGYPGQRYYGGTEFIDELEILCQKRALQVYGLDPKSWGVNVQPYSGS
PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYI
NYDQLEENARLFHPKLIIAGTSCYSRNLDYARLRKIADENGAYLMADMAHISGLVAAGVV
PSPFEHCHVVSTTTHKTLRGCRAGMIFYRKGVRSVDPKTGKETLYNLESLINSAVFPGLQ
GGPHNHAIAGVAVALKQALTPEFRLYQRQVVANCQVLAQTLMELGYKVVTGGSDNHLILV
DLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKEFQKV
AQFIHRGIELTLQIQNDIGAKATLKEFREKLAGDEKHQRAIRVLREEVESFASLFPLPGL
PEF
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtcaatgggactcacaaggatgctgacctgtggtcctcgcataataaaatg
ctggcgcagcccctgaaagacggcgacactgaggtttacgacatcatcaagaaagagagt
aaccggcagagggtcgggctggagctgatcgcctcagagaatttcgccagccgggcagtt
ttggaggccctaggctcttgcttaaataacaagtactctgaggggtacccaggccagagg
tattatggcgggaccgagttcatcgatgagctggaaatcctctgtcaaaagcgagcgctg
caggtctatggtctggatcccaagagctggggggtcaatgtccagccctactcaggctcc
cctgccaacttcgcggtgtacaccgccctagtggagccgcacgggcgtatcatgggcctg
gacctgcccgacggtggccacctgacccacgggttcatgacagacaagaagaaaatctct
gccacgtccatcttttttgagtctatgccctataaggtgaacccagacactggctacatc
aactatgaccaactggaggaaaacgcccgcctcttccacccgaagctcattatcgcagga
accagctgctattcccgaaacctggactacgctcgactgaggaagattgcagacgagaat
ggggcgtatctcatggcggacatggcgcacattagcgggctggtggcagctggtgtggtg
ccctcaccctttgagcactgccacgtggtgtccaccaccacccacaaaaccctgagaggc
tgccgagccggcatgatcttctacaggaaaggagtgcgcagcgtggatcccaagacgggt
aaagagactctgtacaacctagagtcgctcatcaactctgccgtgttcccaggcctgcag
ggtggtccccacaaccacgccattgctggggtcgctgtggccctgaagcaggctctgact
cccgagttcagactttaccagcgacaggtggtggccaactgccaggtgctggcgcagacc
ctgatggagctgggctacaaagtggtaacaggtggttctgacaaccatttgatcctcgtg
gatctccgttccaaaggcacagatggcggaagggctgagaaggttctagaagcctgttct
attgcctgtaataagaacacctgtccaggtgacaaaagtgcactgcggcccagtggactg
cgtctggggactccagccctgacatcgagaggactattggaaaaagagttccagaaagta
gcccagtttattcaccgaggaatagaactgactctgcagatacagaatgacattggggcc
aaggccaccctgaaggagttcagagagaaactggcaggggacgagaaacaccaacgggcc
atcagggtgcttagggaggaagtggagagctttgcgtctctattccctctgcctggcctg
cctgagttctag
DBGET
integrated database retrieval system
