Mustela nigripes (black-footed ferret): 132004183
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Entry
132004183 CDS
T09425
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132004183 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mnp02000
]
132004183 (ABCA5)
Transporters [BR:
mnp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
132004183 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_29
AAA_23
AAA_15
Motif
Other DBs
NCBI-GeneID:
132004183
NCBI-ProteinID:
XP_059236321
LinkDB
All DBs
Position
16:10574951..10644760
Genome browser
AA seq
1687 aa
AA seq
DB search
MLTQEGCRTPNSGAFSTHHVGCLPKRTGWVPSGRTPRRRSLTDSENMATAIREVGVWRQT
RTLLLKNYLIKCRTKKSSVQEILFPLFFLFWLILISMMHPNKKYEEVPDIELNPMDKSIL
SNLILGYTPVTNTTRNIMQKVSTDHLPEVIITEEYANEKELLVSSLSKPNNFVGVVFKDF
MSYELRFFPDMIPVSSIYMDSRAGCSTSCEAAQYWTSGFTVLQASIDAAIIQLKTNVSFW
KELESTRAVIMGETSVVEIDTFPRGVILIYLVIAFSPFGYFLAIHIVAEKEKKLKEFLKI
MGLHDTAFWLSWVLLYTSLIFLMSLLMAVIATASSLFPQSSCVVIFLLFFLYGLSSIFFA
LMLTPLFKKSKHVGIVEFLVTVAFGFVGLLIVFMESFPKSLVWLFSPFCQCTFLIGIAQV
MHLEDFNEGALFSNLAEGPYPLIITIVILSLNSVFYVLLAIYLDQVIPGEFGLRRSSFYF
LKPSYWSKSKRNYKELSEGNVNGNISFSEIVEPVSSEFMGKEAIRISGIQKTYRKKGENV
EALRNLSFDIYEGQITALLGHSGTGKSTLMNILCGLCPPSDGFASIYGHRVSEIDEMFEA
RKMIGICPQLDIHFDVLTVEENLSILASIKGIPANNIIQEVQKVLLDLDMQAIKDNQAKK
LSGGQKRKLSLGIAVLGNPKILLLDEPTAGMDPCSRHIVWNLLKYGKSNRVTVFSTHFMD
EADILADRKAVISQGMLKCVGSSIFLKSKWGIGYRLSMCIDRYCATESLSSLVKQHIPGA
TLLQQNDQQLVYSLPFKDMDKFAGLFSALDTHSNLGVISYGVSMTTLEDVFLKLEVEAEI
DQADYSVFTQQPPEEEMDSKSFDEMEQSLLILSETKASLMSTMSLWKQQVYTIAKFHLLT
LKRESKSVRSVLLLLLIFFAIQIFMFLVHRSFKNAVVPIKLVPDLYFLKPGDKPHKYRTS
LLLQNSTDSDISDLTSFFTSQNIMVTMFNDSDYVSAAPHSAALNVMYSEKDYVFTAVFNS
TMVCSLPVLMNIISNYYLYHLNVTESIQVWNTPFFQEITDIVFKIELYFQAALLGIIVTA
MPPYFAMENAENHKIKAYTQLKLSGLLPSAYWIGQAIVDIPLFFLVLILMLGSLFAFHYG
LYFYAIKFLSVVFCLIGYVPSVILFTYVISFTFKKILNTKEFWSFIYSVTALACIAITEI
TFFMGYTVTAVLHYTFSIVIPIYPLLGCLICFIKISWKNIRKNEDTYNPWDRLLVAVVSP
YLQCVLWIFLLQYYEKKYGGRSIRKDPFFRTLSTKSKNRKYPEPPSNEDEDEDVKAERLK
VKELMSCQCCEEKPAIMVSNLHKEYDDKKDFLLTRKVKKVATKYVSFCVKKGEILGLLGP
NGAGKSTIINILVGDIEPTSGQVFLGDYSEPTDGDDSVKYMGYCPQINPLWPDITLQEHF
EIYGAVKGMSSSDMKEVITRITNALDLKEHLQKTIKKLPAGIKRKLCFALSMLGNPHITL
LDEPSTGMDPKAKQHMWRAIRTAFKNKKRAAILTTHYMEEAEAVCDRVAIMVSGQLRCIG
TVQHLKSKFGKGYFLEIKLKDWIENLEVDRLQREIQYIFPNASRQESFSSILAYKIPKED
VPSLSQSFSKLEEAKHTFAIEEYSFSQATLEQVFVELTKEQEEEDNSCGTLNSTLWWERT
QEDRVVF
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgctaacccaggagggatgccggactccaaattctggtgctttctctacccaccatgtt
gggtgtctgcccaagaggacgggatgggtgccttcggggaggactccgcgccggagatcg
ctgactgattcagaaaacatggctactgcaattagggaggtgggagtttggagacagacc
agaacactcctgctgaagaattacctaatcaaatgcaggactaaaaaaagtagtgttcag
gaaattctttttccattattttttttattttggttaatattaattagtatgatgcatccg
aataagaaatacgaagaagtgcctgacatagaacttaaccctatggacaaatctattctg
tctaacctaattctgggatatactccagtgactaatactacaagaaacatcatgcaaaaa
gtttctactgaccaccttcctgaggtcataattactgaagaatatgcaaatgaaaaagaa
ttgttagtatccagtctttctaaacccaacaactttgtgggtgtggttttcaaagacttc
atgtcctatgaacttcgtttttttcctgatatgattccagtgtcttctatttatatggat
tcaagagctggctgttcaacatcgtgtgaggctgctcagtactggacctcagggttcaca
gttttacaagcatccatagatgcagccattatacagctgaagaccaatgtttctttttgg
aaggaactggagtcaactagagctgtcattatgggagaaacttctgtggttgagatagat
acatttccccgaggagtgattttaatatacctagttatagcattttcaccttttggatac
tttttggcaattcatatcgtagcagaaaaagagaaaaagttaaaggagtttttaaagata
atgggacttcatgacactgccttttggctttcctgggttcttctgtatacaagtttgatt
tttcttatgtcccttcttatggcagtcattgcaacagcttcttcgctattccctcaaagt
agctgtgttgtgatatttctactttttttcctgtatgggttatcgtctatattttttgct
ttaatgctgacacctctttttaaaaaatcaaaacacgtgggaatagttgaatttttagtc
actgtggctttcggatttgttggccttttgatagtcttcatggaaagttttcccaaatca
ttagtgtggcttttcagtcctttctgtcagtgtacttttttgattggtattgcacaggtc
atgcacttagaagattttaatgaaggtgctttattttctaatttggctgaaggcccatat
cctctaattattactattgtcattctatcacttaatagtgtattctatgtcctcttggct
atctatcttgatcaagtcattccaggggaatttggcttacggagatcatctttttatttt
ctaaagccatcatattggtcaaagagcaaaagaaattataaggagctatcagaaggcaat
gttaatgggaatattagttttagtgaaattgttgagcctgtttcttcagaatttatgggg
aaagaagccataagaatcagtggtattcagaagacttacagaaagaaaggtgaaaatgtg
gaggctttgagaaatttgtcatttgacatatacgagggtcagattactgcattacttggc
cacagtggaacaggaaagagtacattgatgaatattctttgtggactatgcccgccttct
gatggatttgcatctatatatggacacagagtctcagaaatagatgagatgttcgaagca
agaaaaatgattggcatttgtccacagttagatatacattttgatgttttgacagtagaa
gaaaacttatccattttggcttcaatcaaaggaataccagccaataatataatccaagag
gtgcagaaggttttactggatttagacatgcaggctatcaaagataatcaagctaaaaag
ttaagtggtggtcaaaaaagaaaactgtctttaggaattgctgttcttgggaatccaaag
atattgttgctagatgaaccaacagctggaatggacccctgttctcgtcatattgtttgg
aatcttctgaaatatggaaaatctaatcgggtaacagtgtttagtactcatttcatggat
gaagctgatattcttgctgataggaaagctgtcatatcacaaggaatgttgaaatgtgtt
ggttcttcaatttttctcaaaagtaaatgggggattggctaccgcctaagcatgtgcata
gaccgatactgtgccactgaatctctttcttccctggttaaacaacatatacctggagct
accttattacaacagaatgaccaacaacttgtgtatagtttaccttttaaggacatggac
aaatttgcaggtttattttctgctctagacactcattcaaatttgggtgtaatttcttac
ggtgtttcaatgacgactttggaagatgtgttcttaaagctggaagttgaagcagaaatt
gaccaagcagattatagtgtatttactcagcagccaccagaggaagaaatggattcaaaa
tcttttgatgaaatggagcagagcttacttattctttctgaaaccaaggcttctcttatg
agcaccatgagcctttggaaacaacaggtgtatacaatagcaaagtttcatttgctgacc
ttgaaaagggaaagtaaatcagtaagatcagtgttgcttctgcttttaattttttttgca
attcagatttttatgtttttggtgcaccgctcttttaaaaatgctgtggttcccatcaaa
cttgttccagacttatatttcctaaaacctggagataaacctcataaatacagaacaagt
ctgcttcttcaaaattctactgactctgatatcagtgatcttaccagctttttcacaagc
cagaacataatggtgacaatgtttaatgacagtgactatgtgtctgctgctccccatagt
gcagctttaaatgtgatgtattctgaaaaggactatgtttttacagctgttttcaacagt
actatggtttgttctttacctgtattgatgaatattatcagtaattattatctttatcat
ttaaatgtgactgaaagcatccaggtctggaataccccattctttcaagaaattacagat
atagtttttaaaattgagctgtattttcaagcagctcttctgggaatcattgttactgca
atgccgccttactttgccatggaaaatgcagagaatcataagatcaaagcttatacccag
cttaaactttcaggacttttgccatctgcgtattggattggacaagctattgttgatatc
cccttattttttcttgttcttattttgatgctaggaagtttatttgcgtttcattatgga
ttatatttttatgctataaagttcctttctgtggttttttgccttattggttatgttcca
tcagtcattctgtttacctatgttatctccttcacttttaaaaaaattttgaataccaaa
gagttttggtcatttatctattctgtgacagcattggcttgcattgcaatcaccgaaata
acgttctttatgggatacacagttacggctgttcttcattataccttttccatagtcatt
ccaatctatccacttctaggttgtctgatttgtttcataaagatttcttggaagaatatt
cgaaaaaatgaagacacctataatccatgggataggcttttggtggctgttgtatcgcct
tacctgcagtgtgtactctggattttcctcttacagtactatgagaaaaaatacggaggc
aggtcaataagaaaggatccttttttcaggactctttcaacaaagtccaaaaataggaag
tatccagaaccaccaagcaatgaggatgaagatgaagatgtcaaagctgaaagactaaag
gtcaaagagctaatgagttgccagtgttgtgaggagaagccagccattatggtcagcaat
ttgcataaagaatatgatgacaagaaagattttcttcttacaagaaaagtaaagaaagtg
gcaactaaatatgtctctttctgtgtgaaaaaaggagagatcttggggctactgggtcca
aatggtgcaggcaaaagcacaattatcaatattctggttggtgatattgaaccaacttca
ggccaggtatttcttggagattattcagagccaactgatggtgatgattccgttaagtat
atgggatactgtcctcagataaacccactgtggccggatattacattgcaggaacatttt
gaaatttatggagctgtgaaaggaatgagctcaagtgacatgaaagaagtcataactcgg
ataacaaatgcacttgatttaaaagaacaccttcagaaaactataaagaaactacctgca
ggaatcaagcgaaagttgtgttttgccctgagtatgctggggaatcctcacattaccctg
ttagatgagccatctacaggtatggatcctaaagcgaaacagcacatgtggcgagcaatt
cgaactgcatttaaaaataaaaagcgggctgctattctgaccactcattatatggaggaa
gcagaggctgtctgtgaccgggtggccatcatggtatctgggcagttaagatgtattggg
actgtccagcatctgaagagtaaatttggaaaaggctactttttggaaataaagttaaag
gactggatagaaaacctagaagtagaccgccttcaaagagaaatacagtatattttccca
aatgcaagccgtcaagagagtttttcttctattttggcttataagattcctaaggaagat
gttccatccctttcacaatctttttctaagctggaagaagctaaacatacttttgccatt
gaagaatacagcttttctcaagcaacattggaacaggtttttgtagaactcactaaagaa
caagaggaagaagataacagttgtggaaccttaaacagcacgctttggtgggaaagaaca
caggaagacagagtagtgttctga
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integrated database retrieval system
