Mustela nigripes (black-footed ferret): 132004285
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Entry
132004285 CDS
T09425
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04142
Lysosome
mnp04144
Endocytosis
mnp04721
Synaptic vesicle cycle
mnp04961
Endocrine and other factor-regulated calcium reabsorption
mnp05016
Huntington disease
mnp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132004285 (CLTC)
04142 Lysosome
132004285 (CLTC)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
132004285 (CLTC)
09156 Nervous system
04721 Synaptic vesicle cycle
132004285 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
132004285 (CLTC)
09164 Neurodegenerative disease
05016 Huntington disease
132004285 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnp04131
]
132004285 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mnp04147
]
132004285 (CLTC)
Membrane trafficking [BR:
mnp04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
132004285 (CLTC)
Exosome [BR:
mnp04147
]
Exosomal proteins
Proteins found in most exosomes
132004285 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_1
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
132004285
NCBI-ProteinID:
XP_059236537
LinkDB
All DBs
Position
16:33241597..33306504
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAICNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgccaattcgttttcaggagcatctccagctccagaacctgggtata
aatccagcaaacattggcttcagtaccctaactatggagtcagacaaattcatctgcatt
cgagagaaagtaggagagcaggctcaggtggtaatcattgatatgaatgacccaagcaat
ccaattcgaaggccaatttctgcagacagcgccatcatgaatccagctagcaaagtaatt
gcactgaaagctgggaaaactcttcagatatttaacattgaaatgaaaagtaaaatgaag
gcccataccatgactgatgatgtcaccttttggaaatggatctctttgaatacggttgct
cttgttacggataatgcagtttatcattggagtatggaaggagagtctcagccagtgaaa
atgtttgatcgccattctagccttgcagggtgtcagattatcaattatcgtacagatgca
aagcaaaagtggttacttctgactggcatatctgcacagcaaaatcgtgtggtgggagct
atgcagctgtattctgtagataggaaagtgtctcagcccattgaaggacatgcggctagc
tttgcgcagtttaaaatggaaggaaatgcagaagaatctacgttattttgttttgcagta
cggggtcaagctggagggaagttacatatcattgaagttggcacaccacctacaggaaac
cagccctttccaaagaaggcagtggatgttttcttccctccagaagcacaaaatgacttt
cctgttgcaatgcagattagtgaaaagcatgatgtagtattcttgattactaagtatggt
tatatccacctctatgatcttgagactggtacctgtatctacatgaatagaatcagtgga
gaaacaatctttgttactgcaccgcatgaagctacagctggaataattggagtcaacaga
aagggacaagttctgtcagtatgtgtggaagaagaaaacataattccttatatcaccaat
gtcctacaaaatcctgatttggctctgagaatggctgtacgtaacaacttagctggtgct
gaagaactctttgcccggaaatttaatgctctttttgcccagggaaattactcagaggca
gcaaaggtagctgccaatgcaccaaagggaatccttcgtaccccagacactatccgtcgg
ttccagagtgtcccagcccagcctggtcaaacttctcctctacttcaatattttggaatt
cttttggaccagggtcagctaaacaagtacgaatccttagaactgtgtagacctgtactt
cagcaaggacggaaacagcttttggagaaatggttaaaagaagataagctggaatgttca
gaagaactgggtgaccttgtgaaatctgtggaccctacattggcacttagtgtgtatctg
cgggctaatgtcccaaataaagtcattcagtgctttgcagaaacaggtcaagtccagaag
attgttttatatgcgaaaaaagttggatatactccagactggatattcttgctgaggaat
gtcatgcgtatcagtccagatcagggacagcagtttgcccaaatgttagttcaggatgaa
gaacctcttgctgatatcacacagattgtggatgtctttatggaatacaatctaattcag
cagtgtacagcattcttgcttgatgccctgaagaataaccgcccatctgaaggtccttta
cagacacggttgcttgagatgaaccttatgcatgcgcctcaagttgcagatgctattcta
gggaatcagatgttcacgcattatgaccgggctcatattgctcagctgtgtgaaaaggct
ggtctgctgcagcgtgcattagaacacttcactgatttatatgacataaagcgtgcggtt
gttcacactcatcttcttaaccctgagtggttagtgaattactttgggtccttatcagtg
gaagactccctagaatgcctcagggccatgctgtctgccaatattcgtcaaaatctgcag
atttgtgttcaggtggcttcgaaatatcatgagcaactgtcaactcaatctctgattgaa
ctttttgaatctttcaagagttttgaaggtctcttttattttctgggatccattgttaac
tttagtcaggacccagatgtgcactttaagtatattcaggcagcttgcaagactgggcaa
atcaaagaagtagaaagaatctgcagagaaagcaactgctatgatcctgagcgagtcaag
aattttctcaaggaagcaaagctaacagatcagttaccacttatcattgtatgtgatcga
tttgactttgtccatgatttggtgctctatttatatagaaataatcttcaaaagtatata
gagatatatgtacagaaggtgaatccaagtcgacttcccgtggttataggaggattgctt
gatgttgattgctctgaagatgtcattaaaaatttaattcttgttgtaagaggtcaattc
tctactgatgagcttgttgctgaggttgaaaaaagaaacagattgaaactgcttctgcct
tggctagaggccagaattcatgagggctgtgaggagcctgctactcacaatgcattagcc
aaaatctacatagacagtaataacaacccagagagatttcttcgtgaaaatccttattat
gacagtcgcgttgttggaaagtattgtgagaagagagatccacatctggcctgtgttgct
tatgaacgtggccagtgtgatctggaacttattaatgtttgcaatgagaattccctcttc
aaaagtctttcccgctatttggtacgccgaaaggatccagaattatggggtagtgtgctg
ctggaaagcaatccttacaggagacccctaattgaccaggttgtacagacagccttgtct
gagactcaggaccctgaagaagtgtcagtaactgtcaaggcttttatgactgcagacctt
cctaatgaactcattgaactgctggagaaaattgtccttgataactctgtattcagtgaa
cacaggaatctgcaaaacctcctcatcctcactgcaatcaaggctgaccgtacacgtgtt
atggagtatattaaccgcctggataattatgatgccccagatattgccaatattgccatc
tgcaatgagttgtttgaagaagcatttgccattttccggaaatttgatgtcaatacttca
gcagttcaggtcttgattgaacatattggaaatttggatcgggcatatgagtttgctgaa
cgctgcaatgaacctgcagtctggagtcagcttgcaaaagcccagttgcagaaaggaatg
gtgaaagaagccattgattcatatatcaaagcagatgatccttcatcctacatggaagtt
gttcaagctgccaatactagtggaaactgggaagaactagtgaagtacttgcagatggcc
cgtaagaaggctcgtgagtcctatgtggagacagaattgatatttgccctggctaaaaca
aatcgcctggcagagttagaagaattcatcaatgggccaaataatgctcatatccaacaa
gttggtgaccgttgttatgatgaaaagatgtatgatgctgctaaactattgtataataat
gtttccaattttggacgcttggcatctaccctggttcatctgggtgaatatcaggcagct
gttgatggagctaggaaagctaacagtactcgaacatggaaagaggtctgcttcgcctgt
gtagatggcaaggagtttcgtcttgctcagatgtgtgggcttcatatagtagtacatgca
gatgaattggaggaacttatcaactactatcaggatcgaggctactttgaagaactgata
accatgttggaagcagcgctgggacttgagcgagctcatatgggaatgtttaccgaatta
gctattctatattctaaatttaagccacagaaaatgagggagcacctggaactgttctgg
tccagagtgaatattcctaaggtgcttagagctgcagaacaagctcatctttgggcagaa
ttggtgtttttgtatgacaagtacgaagaatatgataatgccataattactatgatgaat
catccaactgatgcatggaaagaagggcagttcaaagatatcattaccaaggttgccaat
gtagaactatattacagagcaatacagttctacttagaattcaagcctctgttgttaaat
gatttgctgatggtgctgtctccacggttggatcatactcgtgctgtcaattatttcagc
aaggttaaacagctaccgctggtgaaaccatatttgcgttcagttcaaaaccacaataat
aaatctgtgaacgaatcactgaacaacctcttcattacagaagaagattatcaggctctg
cgaacatcaatagatgcttatgacaactttgacaatatctcacttgctcaacgtttggaa
aaacatgaactcattgagttcagaagaattgctgcttatctcttcaaaggcaacaatcgc
tggaaacagagtgtagagctgtgcaagaaagatagcctgtacaaggatgcaatgcagtat
gcctctgaatctaaagatactgagttggctgaagaacttctacagtggtttttgcaggaa
gaaaaaagagagtgctttggagcttgtctttttacctgttatgatcttttaaggccagat
gttgtcctggaaactgcatggaggcacaatatcatggattttgccatgccctatttcatc
caggtcatgaaggaatacttgacaaaggttgatgcaataaaggaaaaggtggataaatta
gatgcttcagagtcactgagaaaagaagaagaacaagctacagagacgcaacctattgtt
tatggtcagccccagttgatgctgacagcaggacccagtgttgcagtccctccccaggca
ccttttggctatggttatactgcaccaccctatgggcagccacagcctggctttgggtac
agcatgtga
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integrated database retrieval system
