Mustela nigripes (black-footed ferret): 132004432
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Entry
132004432 CDS
T09425
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03013
Nucleocytoplasmic transport
mnp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132004432
03015 mRNA surveillance pathway
132004432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132004432
03041 Spliceosome [BR:
mnp03041
]
132004432
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132004432
Spliceosome [BR:
mnp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
132004432
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
132004432
NCBI-ProteinID:
XP_059236840
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All DBs
Position
16:complement(48550980..48553820)
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AA seq
897 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEIIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNSREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSRENRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSDSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRFPSHTRPRR
RHRSRSRSYSPRRRPSLRRRPSPGRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSWSPPKRPPKRTSSPPRKTCRLSPSASPPRRRHRPSPPAIPLPKTRHSPTPQQS
NRTRKSRVSVSPGRPSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRWRHSPSRSASPSPXKRQKET
SPRGRWRRSPSPPPTRRQCSPSPASPPPRRRRSPTPPPRRRTPPPPRQHSPSPRRYSPPI
QRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRQVSHSPPPKQRSSSVTKRRSPSLSSKH
RKGSSPSRSAREPRSPQPNKRHSPSPRPRAPQTSSSHPPVRRGASSSPQRRQSPSPSIRP
IRRVSRTLEPQKTKKAASLSPQSVRRVSSSRSVSGSPEPAAKKPPASQSPVQSQSPSTNW
SPAVPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKHKKEKAVAAAAAAAAAITP
VAPTAPTTTSAQEELEAEPEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPQS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagagcaggataatcggttcagcaataaa
cagaagaagctactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggagattataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaattctagagaa
tttatgggagaactgtggcccctcctcttaagtgcgcaagaaaacatcgctggaatccct
tctgcttttctagaactgaagaaagaagaaataaaacagagacaaattgaacaagaaaag
ttggcttctatgaaaaagcaagatgaagacaaggataagagggataaggaagaaaaagaa
agcagcagagaaaacagggagaggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtgattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgctccagaaaagaaggaaaaaact
ccagagctcccagaaccatcagtgaaagtaaaagaaccttcagtacaagaggccacttct
actagtgacatcctgaaagttcctaaacctgaacctgtaccagagcctaaagaaccttct
ccagagaaaaattccaaaaaagaaaaggagaaggagaagacccgaccaagatctcggtca
cgttccaaatcaagatcccggacacggtctcgctttccttctcatactcgacctagacga
cgtcatagatcccgatcaagatcatactcacctagaaggaggccaagtctgagaaggcgg
ccatctcctggaagaagaaccccaccaagacgaatgccacctccacccaggcatagaagg
agtagatctccagtgagacgaagaaggcgttcatcagcatccttgtctggaagtagctca
tcatcctcttcgtctcgttcctggtcaccgccaaagaggcctcctaagaggacatccagc
ccccctcgaaaaacttgtaggttatctccttcagcgagtcctcccaggcgaaggcatagg
ccatcacctccagcaattccactgccaaaaactcgtcattccccaacaccccagcagtca
aaccgtacaagaaaaagtcgtgtttctgtctctccagggagaccttcaggtaaagtgaca
aaacataaaggtactgagaaaagagagtccccttcaccagcacctaagcctagaaaagta
gagttatctgaatcggaagaagataaaggtggcaaaatggctgcagcagattctgtgcag
cagagacgtcagtacagacgacagaaccagcagtcttcatctgattctggctcctcttct
tcctcagaagatgagcgacccaagaggtcccatgtgaagaatggtgaggtaggcaggcgg
tggagacattccccttcccggagtgcctctccatcaccttgaaagcgccagaaggagact
tcccctcgcggtagatggaggaggagtccctccccaccacccaccagaaggcaatgttct
ccttctcctgcctctcctcctcctcgtaggcgcagatctcccacaccgccaccacgtcga
aggactcctccaccaccccgccagcactcaccttctccaagaagatactctcctccaata
cagaggagatactctccttccccgcctccaaagagaagaacagcttctccccctccccct
cctaaacgaagggcatcaccatctccaccaccaaagcgtcaggtctcccattctccacct
cccaaacaaagaagctcctcagtcaccaagagacgttcgccttcattatcatcaaagcat
aggaaagggtcttccccgagccggtctgcgcgtgagccccggtcaccacaaccaaacaaa
aggcattcgccctcaccacggcctcgagctcctcaaacctcctcaagccatccacctgtt
cgaagaggagcgtcgtcatcaccccaaagaaggcagtccccttctccaagtattaggccc
attaggagagtctccaggactctggaaccccaaaagacaaaaaaggctgcctcactaagc
cctcagtctgtaaggagggtctcatcctcccgatctgtctcaggatctcctgagccagca
gctaaaaagcccccagcatctcagtctcctgtccagtcccagtccccctcaaccaactgg
tcaccagcggtaccagtcaaaaaggctaaaagcccaacaccaagcccatctccagcgagg
aactcagacccagaaggaggtggaaagaagaagaagaaaaagaaggacaagaaacacaaa
aaacacaagaaggaaaaggccgtggcggcagccgcagcagcagcagcagctatcacccct
gtggcccccactgcccccacgaccacatcagcacaggaggaactggaggcagagcccgag
cctaagaaggagaccgaaagcgagcctgaagacaacctcgacgacttagaaaagcacctg
cgtgaaaaggcgctgagatcgatgcggaaggctcaagtgtccccacagtcttag
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