Mustela nigripes (black-footed ferret): 132004506
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Entry
132004506 CDS
T09425
Symbol
RAI1
Name
(RefSeq) LOW QUALITY PROTEIN: retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnp03000
]
132004506 (RAI1)
Transcription factors [BR:
mnp03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
132004506 (RAI1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
132004506
NCBI-ProteinID:
XP_059236985
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All DBs
Position
16:complement(48132493..48250437)
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AA seq
1901 aa
AA seq
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MQSFRERCGFHGKQQNYQQTSQETSRLENYRQPGQAGLSCDRQRLLAKDYYNPQPYPAYE
GGAGAPAGSARGSKGLASQPSLQGRPAFSGYSVPDSSPYPGRYSGEESLQAWGAPQPPPP
QPQPLPGGVGKYDDSLMKKAAVPPGRQYPEQGAQLPFRTHSLHVQPQLPQPQQPLAYPKL
QRQKLQNDMASPLPFPQGGHFPQHSQSFPPSSTYSTGGQGTQGGGGGGGGQGAHSYKSCT
APSAPPHDRPLAANASLAPGQRVQNLHAYQSGRMGYEQQKQQQQQQQQQQAALQSRHHAQ
ETLHYQNLAKYQHYGQQGAGYCQQDAAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTP
SPLMPNLENFPYNQQPLATGAFPAGITDHSHFMPLLNPSPTDAAGTVDTQPGNCKAPPKD
KLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKAAVPQKKGGKNLVSRTPEQHRSQH
CSPEGSGYSAEPAGTPLSEPLSSTPQSTHAEPPEADYLSGSEDPLERSFLYCNQARGSPA
RVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSLHGSLPLDSFSKFVAGERDCPRLLLS
ALAQEDLASEILGLQEAIGEKAEKTWAEAPGLAKDASKPPPFSLENHSACLDSVAKNAWP
RPGEPEALPESLQLDKGGSAKDFSPGLFEDPSVAFAAPDPKKTTGPLSFSTKATLGAATS
DPAAAAFDCFPDASTASSTDGANPFAWPEENLGDACPRWGLHPSELTKGLEQGGKASDGV
GKENAHEASACPGFQEEAPPGEKATVPRDSVQEEAGGVKEEVGGLLQCPEVGKADRWLED
SRHCCSAADFGDLPLLPPPGRKEDLEAEEEYSSLCELLGSPEQRPGLPDPLSPKAPLLCT
KEEVEEVLDSKTGWGSPCHLSGDSVILLGPTVGAESKVQSWFESSLSHMKPGEEGPDGVL
APGDTTTLAPEASLAQKPSKPAVPEAPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRAP
VLPKDLLLPESCTGPPQGQMEGAGTPGRGASEGLPRMCTRSFTALSEPRTPGPPGLTTTP
APPDKLGGKQRAAFKSGKRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSPSTPG
KDQRSMILRSRTKTQEAFHSKRRRPSESRLPSCRATKKLLANNHLPAPFKVSGSPQKEGR
ASQRARVAKPGAGSKLSDRPLHALKRKSAFLAPVPTKKRNLVLRSGSGGDVKEEGAEDPS
PLFKRMASPKKAKPAKGNGEPAVKPLPPETPDTCLKLASRAAFQGAMKTKVLPPRKGRGL
KLEAIVQKITSPSLKKFACKVPGAPPGTPLSPSLPEKDRGLKSAGGSPVGAGEGLLNVGP
GQKLPAAPGTDSLCRNPTNRSLKGKLLNSKKLSSTDCFKTEAFTSPEALLPGGTALAPKK
RSRKGRAGALGLPKGPLEKRPHLGPALLLTPRDRANGTQGGSEDSSGGAGKKPKTEELGL
ASQSPEGRPCQPQTRAQKQPGHANYSSYSKRKRLTRGRAKNTTSSPCKGRAKRRRQQQVL
PLDPAEPEIRLKYISSCKRLRADSRTPAFSPFVRVEKRDAFTTICTVVNSPGEEPKPHRK
PSSSASSSSSSCSFSLDATGASLATLPGGSVLQPRPSLPLSSTMHLGPVVSKALSTSCLV
CCLCQNPANFKDLGDLCGPYYPEHCLPKKKPKLKEKVRPEGACEEASLPLERTLKDLECA
ATAAAGKPPRPEGPADPAKQGSLRTSARGLSRRLQSCYCCDGRGDGGEEAAPTDKSRKHE
CSKEPPAEPGGDTQEHWVHEACAVWTGGIYLVAGKLFGLQEAMKVAVDMTCSNCQEAGAT
IGCGHKGCSHTYHYPCASDAGCIFIEENFSLKCPKHKRLPL
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacaacagaactaccagcagacc
tcacaggagacatctcgcctggagaattacagacagccgggccaggccgggctgagctgc
gaccggcagcggctgctggccaaggactattataacccgcagccctacccggcctacgag
ggtggcgccggcgcacccgccggctcagcgcggggcagcaagggcctggcctcccagccg
tccctgcagggccggccggccttctcgggctatagtgtgccggacagcagcccgtacccc
ggccgctactcgggcgaggagagcctgcaggcctggggggcccctcagccgccgcccccg
cagccgcagcccctgccagggggcgtgggcaaatatgacgacagcttgatgaaaaaggca
gcggtgcccccgggcaggcagtacccagagcagggtgcccagctgcccttccggactcac
tctctgcacgtccagccgcagctgccgcagccccagcagcccctggcataccccaaactc
caaaggcagaaactgcagaacgacatggcctcacccctgcccttcccccagggtggccat
ttcccccagcactcacagtctttccccccttcctccacctactccaccgggggccagggc
acgcaggggggcgggggcggcgggggcgggcagggggcccactcctacaagagctgcacc
gcgccgtccgcaccgccccacgacaggccactggccgccaacgccagcctggccccgggg
cagcgggtccagaaccttcacgcctaccagtccggccgcatgggctacgagcagcagaag
cagcagcagcagcagcaacagcagcagcaggcggccctccagagccggcaccatgcccag
gaaaccctccattaccaaaaccttgccaagtaccaacactatgggcagcagggcgcgggc
tactgccagcaggacgcggccgtgcggactccggagcagtactaccagaccttcagcccc
agctccagccactcgcccgcacgctccgtgggccgctcaccctcctacagctccacccca
tcgccgctgatgccaaacctggagaactttccctacaaccagcagccgctcgccaccggc
gccttccccgcgggcatcacggaccacagccacttcatgcccctgctcaacccctccccg
actgatgccgccggcacggtggacacccagcctggcaactgcaaggcgccgcccaaggac
aagctgcccgagaacctgctgtcggacctcagcctgcagagcctcacggccttgacctcc
caggtggagaacatctccaacacggtccagcagctgctgctctccaaggctgccgtgccg
cagaagaagggcggcaagaacctggtgtccaggaccccggagcagcaccggagccagcac
tgcagccccgagggcagcggctactcggccgagccagcaggcacgccgctatctgagccg
ctgagcagcacgccgcagtccacgcacgctgagccacctgaggccgactacctgagcggc
tccgaggacccgctggagcgcagcttcctctactgcaaccaggcccgtggcagccccgcc
agggtcaacagcaactcgaaggccaagcctgagtcggtgtccacctgttcagtgacctcg
cccgacgacatgtccaccaagtccgacgactccttccagagcctacatggcagcctgccg
ctcgacagcttctccaagttcgtggcgggcgagcgggactgcccgcggctgctgctcagc
gccctggcgcaggaggacctggcctccgagatcctcgggctgcaggaggccatcggcgag
aaggctgagaagacctgggccgaggcgcccggcctggccaaggacgccagcaagcctcct
cccttctcgctggagaaccacagcgcctgcctggactctgtggccaagaacgcttggcca
cggccaggggagccagaggccctgcccgagtccttgcagctggacaagggtggcagtgcc
aaggacttcagcccggggctgttcgaagacccttctgtggccttcgccgccccggacccc
aagaagacgaccggtcccctctcctttagcaccaaggccacgcttggggccgccacatcg
gaccccgctgcggccgcctttgactgcttcccggacgcgagcaccgccagctcgacagac
ggcgccaacccctttgcctggcctgaagagaacctgggggatgcttgtccccggtggggc
ctgcaccccagcgagctcaccaagggcctggagcagggcgggaaggcctctgacggcgtg
ggcaaggagaatgcccacgaggcttcggcctgcccaggcttccaggaggaggcgccgcct
ggggagaaggccaccgtgcctcgggactccgtgcaggaagaggcgggcggggtgaaggag
gaggtgggcgggctgctgcagtgccccgaggtgggcaaggccgaccgctggctagaggac
agccggcactgctgctcggccgccgactttggggacctgcccctgctgccgccacccggc
aggaaggaggacctggaggcggaggaggagtactcctccctgtgcgagctcctgggcagc
cctgagcagaggccgggcctgccggacccgctgtcgccgaaggcccccctgctgtgcacc
aaggaggaggtggaggaggtgctggactccaaaaccggttggggctccccgtgccacctg
tccggcgactctgtcattttgctgggccccactgtgggtgccgagtccaaggtccagagc
tggtttgagtcctccctgtcgcacatgaagccgggcgaagagggccccgacggggtgctg
gcacccggtgacaccaccaccctggccccagaggcctccctggcccagaagcccagcaag
ccggccgtgcccgaggcgcccattgctaagaaagagcccgtgccacgcggcaaaagctta
cggagccggcgggtgcaccgggggttgccggaggccgaggactccccatgccgggcgccc
gtgctgcctaaggacctcttgctcccagaatcctgcaccggccccccacagggacagatg
gaaggagcgggaaccccgggccggggggcctcggaagggctcccgaggatgtgcacacgc
tccttcacggccctgagtgagccccgcacgcctggacccccaggcctgaccaccaccccc
gcccccccggacaaactagggggcaagcagcgagccgccttcaagtccggcaagcgggtg
ggtaagccgtcccccaaggcggcctccagccccagtaacccagctgccctgcccgtggcc
tcagacagcagccccatgggctccaagaccaaggagacagactcgcccagcaccccaggc
aaggaccagcgttccatgatcctgcggtcacgcacgaaaacccaggaggcgttccactcc
aagaggcggcggccctccgagagccgtctccccagctgccgggccaccaagaaactgctg
gctaacaaccacttgcctgccccgttcaaggtctccggcagcccccagaaggagggcagg
gccagccagcgggcccgggtggccaagcctggcgcaggcagcaagctctccgaccggccc
ctccatgcgctcaagaggaagtcggccttcctggcgcctgttcccaccaagaagcggaac
ctggttctgcggagcggcagcgggggggacgtgaaggaggagggggctgaggacccctcc
cccctcttcaagaggatggcttcgcccaagaaggccaagcccgccaagggcaatggtgag
cctgccgtgaagcccctacccccggagacccccgacacctgcctgaagctcgcctcgcgg
gcggccttccagggggccatgaagaccaaggtgcttccgccccggaaaggcaggggcctc
aagctggaggccatcgtgcagaagatcacgtcacccagcctgaagaagtttgcgtgcaag
gtgccaggggcccctcccggaacccccctgagcccttctctccctgagaaggaccgtggg
ctcaagagtgcggggggaagcccagttggggcaggagaaggtctcttaaatgtgggccct
gggcagaagctcccggcagctccggggaccgactcgttatgcagaaatccaaccaacaga
tccttaaaaggcaaactcctaaacagtaagaaactgtcctcgactgactgtttcaaaact
gaggccttcacatccccagaggccctgctgcccggggggactgccctggcacctaagaag
agaagccggaaaggcagggctggagcccttggactccccaaaggtcccctggagaagcgg
ccccatctaggaccggctctgctcctgaccccccgagacagggccaatggcactcagggg
ggcagtgaggacagctctggtggtgcaggcaagaagccaaagacggaggagctgggcctg
gcctcccagtcccctgagggccggccctgccagccccagacaagggcgcagaagcagccg
ggccacgccaactacagcagctattccaagcgaaagcgtctcactcggggccgggccaag
aacaccacctcctcaccctgtaaaggacgtgccaagcggcggcggcagcagcaggtgctg
cccctagaccccgctgagcctgaaatccgcctcaagtacatttcctcgtgcaagcggctt
cgagcagacagccgcaccccggccttctcgccctttgtgcgggtagagaagcgagacgcg
ttcaccaccatatgcactgtggtcaactcccctggggaggagcccaagccccacaggaag
ccttcctcctccgcctcctcttcctcatcctcatgctcgttctccttggatgcgaccggg
gcctccttggccacgctccctggaggctctgtcctgcagccacggccctccctgcccctc
tcctccaccatgcatctggggcccgtggtctccaaggccctgagtacctcttgccttgtt
tgctgcctctgccaaaacccggccaacttcaaggacctcggggacctctgtgggccctac
taccccgaacactgcctccccaaaaagaagccaaaactcaaggagaaggtgcggccggag
ggcgcctgcgaggaggcctcgctaccccttgagagaacactcaaagaccttgagtgcgcg
gccacagccgccgctggaaagcccccgcggcccgagggcccggctgaccccgccaagcag
ggctcgctgcgcaccagcgctcggggcctgtcccggcggctacagagttgctactgctgt
gacggccggggggacggtggtgaggaggcggcccccaccgacaagagccgtaagcacgag
tgcagcaaggagccaccagccgagcctggcggggacacccaggaacactgggtgcacgag
gcctgcgccgtgtggacgggcgggatctacctggtagccgggaagctctttgggctacag
gaggccatgaaggtggccgtggacatgacctgttccaactgccaagaagccggggccacc
atcgggtgcggtcacaaagggtgcagccatacctaccattacccgtgtgccagcgatgcg
ggttgcatattcatcgaagagaacttttctttgaagtgtcccaaacataagaggctgccg
ctgtaa
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