Mustela nigripes (black-footed ferret): 132004724
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Entry
132004724 CDS
T09425
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132004724 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnp03021
]
132004724 (SF3B3)
03041 Spliceosome [BR:
mnp03041
]
132004724 (SF3B3)
03036 Chromosome and associated proteins [BR:
mnp03036
]
132004724 (SF3B3)
Transcription machinery [BR:
mnp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
132004724 (SF3B3)
Spliceosome [BR:
mnp03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
132004724 (SF3B3)
Complex B
132004724 (SF3B3)
Complex C
U2 SnRNP specific factors
132004724 (SF3B3)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
132004724 (SF3B3)
TFTC complex
132004724 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
132004724
NCBI-ProteinID:
XP_059237155
LinkDB
All DBs
Position
17:complement(47233889..47276355)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctatacaacttgaccttgcagcgggccacaggcatcagctttgccattcatggc
aacttctctggaaccaaacagcaggaaattgttgtttcccgtgggaagatactggagctg
cttcgccctgaccccaacactggcaaagtacacactctactaactgtggaagtatttggt
gttatccggtcactcatggcctttaggctgactggtggcaccaaagactacattgtggtt
ggcagtgactcgggtcggattgttatcttggaataccagccatctaagaatatgtttgag
aaaattcaccaagaaacctttggcaagagtggatgtcgccgcattgttcctggccagttc
ttagctgtggatcccaaagggcgagctgttatgattagtgccattgaaaaacagaaattg
gtatatatcttaaacagagatgctgcagcccggcttaccatttcatctcccctagaggcc
cacaaagcgaacactctagtatatcatgtggttggagtagatgtgggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacaggggaagca
gcggccaatactcagcagactcttaccttctatgaattagaccttggtttaaatcatgtg
gtccgaaaatacagtgaacctttggaggaacatggcaactttcttattacagttcccgga
gggtcagatggtccaagtggagtgttaatctgctctgaaaactatatcacttacaagaac
ttcggtgaccaaccagatatccgctgtccaattcccaggagacggaatgacctggatgat
cctgaaagaggaatgatttttgtctgctctgctacccataagaccaaatcgatgttcttc
tttttggcccaaactgagcaaggagatatcttcaagatcactttggagacagatgaagat
atggttactgagatccggctcaagtattttgatactgtgcctgttgctgctgccatgtgt
gtgcttaaaacaggcttcctttttgtagcatcagaatttggaaaccattacttatatcaa
attgcacatcttggagacgatgatgaagaacctgagttttcatctgccatgcctctggaa
gaaggagacacattcttcttccaaccaagaccactcaagaaccttgtgctggttgatgaa
ttggacagtctatctcccattttgttttgccagatagctgatctggccaatgaagacaca
ccacagctctatgtggcatgtggtaggggaccgcgatcatctcttagagtcctaaggcat
ggacttgaggtatcagaaatggctgtctctgagttacccggtaatcccaatgctgtctgg
acagtgcgtcggcatattgaagatgagtttgatgcctacatcattgtgtctttcgtgaat
gccacactggtgttatccatcggagagactgtggaagaagtgactgactctgggtttctg
ggtaccaccccaaccttgtcctgctcgttgttaggagatgacgccttggtgcaggtgtat
cctgatggtattcggcacataagagcagacaaacgagtcaatgaatggaagacccctgga
aagaaaacgattgtaaaatgtgcagtgaaccagcgacaggtggtgatcgccctgacagga
ggagagctggtctattttgagatggatccttcaggacagctgaacgagtacacagagcgg
aaggagatgtcggcagatgtggtgtgcatgagtctggccaacgtgcctcctggagagcag
cggtctcgctttctggctgtggggctagtggacaatactgttagaatcatctctttggat
ccatcagactgtttgcagcctctgagcatgcaggcgctcccagctcagcccgaatccttg
tgtattgtggagatgggtggtactgagaaacaagatgagctgggggagaggggctctatt
ggcttcctatacctgaatattgggttacagaatggtgtgctgctgagaactgtcttggac
cctgtgactggggatctgtctgacacacgtactaggtacctggggtctcgtcctgtgaaa
ctctttcgtgtccggatgcaaggccaggaagcagtgttggccatgtcaagccggtcatgg
ttgagctattcctaccagtctcgtttccatctcacccccttgtcttacgagaccctggag
tttgcatctggctttgcctctgaacagtgtcctgagggtattgttgccatctccaccaat
actctgaggattttagcattggagaagctaggtgctgtcttcaatcaggtggcctttcca
ctgcagtacacacccaggaaatttgttattcaccctgagagtaacaaccttatcatcatt
gagacggaccacaatgcctacactgaggcaacaaaagctcagaggaagcagcaaatggcc
gaggaaatggtagaagcagcaggggaggatgagcgggagcttgctgcagagatggcagca
gcattcctcaatgaaaaccttcctgagtccatttttggagctcctaaagctggcaatggg
cagtgggcctctgtgatccgagtgatgaatcctattcaagggaacacgctggatcttgtc
cagctagaacagaatgaggccgcttttagtgtggctgtatgcaggttttccaacactggt
gatgattggtatgtgttggtgggcgtggccaaagacctgattctcaatcccaggtctgta
gctgggggctttgtctatacctacaagctcgtgaataatggggaaaaactggagtttttg
cacaagactccagtggaagaggtccctgctgccattgctccattccaggggagggtcttg
attggtgtggggaagcttctgcgagtttatgacctggggaagaagaagttactccgaaag
tgtgagaacaagcatattgccaattacatctctgggatccagactattggacacagggta
attgtgtctgatgtccaagaaagtttcatctgggttcgatacaagcgtaatgagaaccag
cttatcattttcgctgatgatacttacccacgatgggtcactacagctagcctcctggac
tatgacactgtggcgggggcagacaaatttggcaacatttgtgtggtgaggctcccacct
aacaccaatgatgaagtggatgaggatcccacaggaaacaaagccctgtgggaccggggc
ttgctcaacggggcctctcagaaggcggaggtgatcatgaactaccatgtgggcgagacc
gtcctgtcattacagaagaccacactgatccctggaggctcagaatcgcttgtctatacc
accttgtcaggaggaattggcatccttgtcccattcacatcccatgaggaccatgacttt
ttccaacacgtagaaatgcatctacggtctgagcatcctcctctctgtggacgagaccac
ctcagttttcgttcctattactttcctgttaagaatgtgatagatggagatctctgtgag
cagttcaactccatggagcccaacaaacagaagaacgtctctgaagaactggaccgaacc
ccacctgaggtgtccaagaagcttgaggacatccggacccgctatgccttctga
DBGET
integrated database retrieval system
