KEGG   Mustela nigripes (black-footed ferret): 132004772
Entry
132004772         CDS       T09425                                 
Symbol
XRCC1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
mnp  Mustela nigripes (black-footed ferret)
Pathway
mnp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mnp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    132004772 (XRCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mnp03400]
    132004772 (XRCC1)
DNA repair and recombination proteins [BR:mnp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     132004772 (XRCC1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 132004772
NCBI-ProteinID: XP_059237247
LinkDB
Position
17:9552137..9573931
AA seq 646 aa
MPEIRLRHVVSCSSQDLVRSWLGGGWKTSGNPCGTHCAENLLKADTYRKWRAAKAGEKTI
SVVLQLEKEEQIHSVDIGNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSGS
NPNRVRIFGPDKLVRAAAEKRWDRVKIVCSQPYSKDSPYGLSFIRFHSPPDKEEAEASPQ
KVTKLGQFRVKEEDEGANSLRPGALFFSRINKTPPATASDPAGPSYAAATLQASSAASSA
SPVSRAVGSTSKPQESPRGKRKLDLNQEERKTPSKPSAQPSPPAVKRPKLPAPTRTLATT
PVPAPARGTVPGKSREGTEPRGPRAGPQELGKILQGVVVVLSGFQNPFRSELRDKALELG
AKYRPDWTPDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSRRYLMAGP
SSSSEDEGGSHSNSSGDEAPKLPRKRPQTKTKPPQAAGPSSPQRPKTPEEAKPASPGPQE
DTDTDGEQSERGNAAEDSGDTEDELRRVAEQREQKQPPDQGENGEDPYAGSTDENTDNEG
PPESPELPVPELPDFFQGKHFFLYGEFPGDERRKLSRYVTAFNGELEDYMSDRVQFVITA
QEWDPSFEEALMDNPSLVFVRPRWIYSCNEKQKLLPHQLYGVVPQA
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgccggagatccgtctccgccatgtggtgtcctgcagtagccaggacttggtgaggagc
tggcttgggggaggttggaagacgtcagggaatccatgcgggacccactgtgcagaaaac
cttctcaaggcggacacttaccgaaaatggcgagcagccaaggcaggcgagaagaccatc
tcggtggtgctccagttggagaaggaggaacagatacacagcgtggacattggcaatgat
ggctcggcctttgtggaggtgctggtgggcagctcagccggaggtgctggggagcaagac
tacgaggtcctgctggtcacctcgtctttcatgtccccttctgagagccgcagtggctca
aaccccaaccgcgttcgcatttttgggcccgacaagttggtccgggcagcagcggagaag
cgctgggaccgtgtcaaaatcgtttgcagccagccttacagcaaggactccccctatggc
ctgagttttatacggtttcacagccccccagacaaagaggaggcagaggcctcaccccag
aaggtgaccaagcttggccagttccgcgtgaaggaggaggatgagggtgccaactccctg
agacccggcgccctcttcttcagccggatcaataagacgcccccagccacagccagtgac
ccggcaggacccagctacgcagctgccaccctgcaggcctctagtgccgcctcttcagcc
tctcccgtctccagggcagtaggcagcacctccaagcctcaggagtcccctagagggaag
agaaagttggatttgaaccaagaagaaaggaagacacccagcaaaccatcagcccagccc
tcaccacccgctgtcaagagacccaaattgccagctcccacccgcaccctggccaccacc
ccagtccctgccccagcacgaggcacagtgccaggaaagtcccgagaaggcaccgagccc
aggggaccccgagctggcccgcaggagctggggaagatccttcagggtgtggtggtggtg
ctgagtggcttccagaaccccttccgctcggagctccgggacaaggccctagagctgggg
gccaagtatcggccggactggactccagacagcacccacctcatctgcgcctttgccaac
acccccaagtacagccaggtcctaggcctcggaggccgcatcgtgcggaaagagtgggtg
ctggactgtcaccggatgcggcggcgactgccctcccggaggtacctcatggcaggacca
agctccagcagcgaggacgaagggggctctcacagcaacagcagcggggatgaagccccc
aagcttccccggaagcgcccccagaccaaaaccaagccccctcaggcagcaggacccagc
tcacctcagagacccaaaaccccagaagaggccaaaccagcctcaccaggaccccaggaa
gacactgacactgatggggagcagtcagaacggggtaatgcggcagaggattctggggat
actgaggatgagctgagaagagtagccgagcagagggagcaaaagcagccccctgaccag
ggggagaatggcgaggacccatatgcaggatccacagatgagaacacagacaatgagggt
cccccagagtctcccgaactgccggttcccgagctcccagacttcttccagggcaaacac
ttctttctgtacggagagttccctggggatgagcggcggaagctcagccgctatgtcaca
gccttcaacggggagcttgaggactacatgagcgaccgggtccagtttgtgatcacagca
caggagtgggaccccagttttgaggaggccctgatggacaatccctccttggtgtttgtc
cgcccccggtggatctacagttgcaacgagaagcagaagttgcttccacaccagctgtat
ggggtggtgccccaggcctga

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