Mustela nigripes (black-footed ferret): 132004835
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Entry
132004835 CDS
T09425
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mnp03036
]
132004835 (TDRD12)
Enzymes [BR:
mnp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
132004835 (TDRD12)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Gene silencing
piRNA pathway
132004835 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
132004835
NCBI-ProteinID:
XP_059237387
LinkDB
All DBs
Position
17:complement(19580403..19646586)
Genome browser
AA seq
1266 aa
AA seq
DB search
MNDFYNNMCQDIEIKPLMLEEGQVCVVYCQELRCWCRAVIKSIVSSADHYLAECFLVDFA
KYIPVKSKNIRVAVETFMQLPYRAKKFRLYCTKPVTLHIDFCEDSAEIVPTKKWDSAATQ
YFQNILKATTQVEAKLCAVEEDAFEVYLYATIKNEKVCVNDDLVAKNFARYISPKENKNM
DSVEKSSLSTKSASFSRRLSPALTLWPMFLQGKDHQGMENSHGLTFLAQSLQHPWPKGVG
DLGPTAMILDSTIKCRDSLRGSPKKKSEKKQEHILKDVNKCVKSSVYWPTKRGITIYAEP
DVPATSALCQKPNEKPLRLAEKKEHNEKNGCVKLLQFLNPDPLRADGIFDLQQLQRLRSG
SQQPLAVLRNKIEPCLTVDTAPLSADLRKALQRNRFPGPSHTESYSWPPIARGCDVVVIS
HCGKSPLLYLPPVLTILQTGGCYKSLPSRNGPLAVIVCPGWKKAQFIFELLEDYSTSSRP
LHPMLLTIGLHKDEAKNMKLPRGCEVIVTTPHSLLRFLRYQSLLFLRLCHLILDEVEVLF
SEASKEMFAILDNFKKNIDIEERESAPHHIVAVGVHWSGHIEQLVKEFMNDPYIVVTAME
EAALYGSVQQVVHLCLECEKTSTLLQTLDFIPSQAQKTLIFTGSVAETETVCKVIESSSV
FCLKMHKEVVFNLKSVLEQWKKKLSSGSHIVLALTDDCIPPLAITDATCVIHFSFPSSPK
IFGGRLYCMSDHFQSSIEQGSPAEQAEKKTKSILLLTEKNACHVVGVLRYLERADAKIPS
ELYEFTAGVLEAKEDKKARRPLCPYLKAFGFCKDKRICPDRHHVNLEIDMPRKLSNQALP
TFGYIKIIPFYILNATHYFGRIVDKQMDLYASLNAEMNEYFKGNSNKMTVEKVEKLGLYG
LAEKTLFHRVQVLEMSQKEDTWAADNVLVKFIDEGRTGLVTRGQLLHLPENFHTLPPQAV
EFIVCRVKPADNEVEWNPKVTRYIHHKIIGKLHDAKVILALGNTVWIDPMVHITKLSNLK
TSVIDYNVRTEILSMGMGIDNSEHIEQLKTFREGAKMPPGEEGPSQALAPSPADDAARLQ
SPQREDSGPEGGADSETKPENQKHETLPENTSDSSLPRTTEPLKSFHPQIKWFQKDDVVI
LKIRIRNVKDYKCKYFQDRVVFSGWAGEKFYLADMELQANVVKDACRCTIVNEEPVITLA
KETRGPWCGLLKQKNPNVAFDFDHWEECEEDSQLPQVVNSKNLPCTVAEVAESSGQPSED
DGSESE
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacttctataataacatgtgtcaagatatagaaataaaaccgttaatgttggaa
gaagggcaggtttgtgtggtgtattgtcaggaactgaggtgttggtgcagggctgttatt
aagtccattgtgtcttcggccgaccattacctggcagaatgtttccttgtggattttgcc
aagtacatccctgtgaaatctaaaaacatcagagtggcagtggaaacctttatgcagctt
ccctaccgagcgaagaaattcaggctgtactgcaccaagcctgtcacgttgcacattgac
ttctgtgaagacagcgctgaaatcgtacctaccaagaagtgggacagcgcagcgactcag
tacttccagaacatcctaaaagcaaccacccaggtggaagccaaattatgtgctgtggaa
gaagatgcttttgaggtctacctttatgcaactataaaaaatgaaaaagtctgtgttaat
gacgatctggttgcgaagaactttgctcgttacatatcacccaaggagaataaaaacatg
gattctgtagagaaatcaagcttgagtacgaagtcagcatccttctccaggagactcagt
ccagcactcactctctggccaatgttcttacaaggaaaagatcatcaaggaatggaaaat
tcacatggtttaacttttctggctcagtccctccagcatccgtggcccaagggtgttggt
gaccttgggccgactgctatgatcctggatagcactataaaatgtagggattcattgaga
ggttcacctaaaaaaaagtctgaaaagaagcaagagcacatcttgaaagatgtaaataag
tgtgttaaatcctccgtgtactggccaacaaagaggggaataaccatatatgctgagcca
gatgtacctgccacgagtgctttatgtcagaagccaaatgagaagccacttaggttggcc
gagaagaaagaacacaatgagaagaatggctgtgtgaaattgttgcagtttttaaatcct
gatcctttgagagctgatgggatctttgatctgcagcagctgcagaggctgcgatctggc
tcccagcagcccttggccgtgctccggaacaagatcgagccttgtttgaccgtggacaca
gcgccgctttcggcagacctgagaaaggctcttcagagaaataggttcccgggacccagc
cacacggaatcctactcttggccacccatcgcccggggctgtgacgtggtggtcatctct
cactgtggaaaaagtcccctgctctacctcccaccagtgcttacaattctgcagacgggg
ggctgctacaagtctttaccaagcagaaacggacctctggcagtcatcgtgtgtcctggg
tggaaaaaggctcagtttatttttgaattactggaagactatagcacgtcctccaggcct
cttcatcccatgttgttaacaatcggactccacaaagatgaagccaaaaacatgaagctt
ccaagggggtgtgaggtcatcgttacgacaccccacagcctcctgagatttctcagatac
cagagcttgttatttcttagactctgtcatctcatcttggatgaggtagaggtgctgttc
tctgaagctagcaaggagatgtttgctatactagataactttaaaaaaaatattgacatt
gaagaaagggaatctgcaccacatcacattgttgctgtgggcgttcactggagcggacac
atagaacagttggtcaaggagttcatgaatgacccctacattgtagtcacagccatggaa
gaggctgctctctacggcagcgtccagcaggtagtgcacctttgcctagaatgtgaaaaa
acctctactttactccagactctagatttcattccaagtcaagcacaaaagaccttgatc
ttcactggttctgtagcagaaacagaaaccgtgtgtaaggtaatagaaagcagttcagta
ttttgcttgaaaatgcataaagaagtggtttttaatttaaaaagtgttttagaacagtgg
aagaagaagttaagttctggctctcacattgtcttagccttgacggatgactgcatacca
cccttggccatcaccgacgccacgtgtgtgattcacttcagctttccttcctcccccaaa
atttttggtggacgcctgtactgcatgtcggatcattttcagagttccatcgagcagggt
tctcccgcagaacaggcggagaagaagaccaaatccatcttgctgttgacagagaagaac
gcgtgccacgtggtcggcgtcctgcgctacttggagcgggcagatgccaagattccgtcg
gagctgtatgagtttactgcgggggttctggaagccaaggaagataaaaaagccagaagg
cctctctgtccatatcttaaggcatttggtttttgcaaagacaaaaggatttgtcctgat
agacaccacgttaatctagaaatagacatgccaaggaagttatccaaccaagccctacca
acatttggatacatcaaaataatacccttttatattttgaatgcaacacattactttggt
cgtatagttgacaaacagatggatctttatgcaagtcttaatgctgaaatgaatgagtat
tttaagggtaacagcaacaaaatgactgttgaaaaggtggagaaacttggattatatgga
ttagcagaaaaaacactatttcacagggtgcaggtgctggagatgagccaaaaagaagat
acctgggctgcggacaatgtcctggtgaagttcatagatgaaggccggaccggactcgtc
acgagaggccaactgctgcatctcccggaaaatttccacactctgcccccccaggcggtg
gagtttattgtttgcagagtgaaacctgcggacaatgaagtagaatggaatccaaaggtt
actaggtacattcatcataaaataattggaaaattgcatgatgccaaagtgatactggct
ttagggaacacagtgtggatcgacccaatggtgcacattacaaaactttccaatttgaag
acctctgttattgattataacgttcgtactgaaattctgtcgatgggaatgggcatcgac
aactccgagcacatagaacagctgaagacgttccgtgagggagctaagatgccgcccggt
gaagaaggcccgagccaggccctcgctccttctccagcagatgatgctgctcgtttgcag
agcccacagcgagaggacagcggcccagaaggaggggctgactccgagacgaagccagaa
aaccaaaagcatgaaactttacctgaaaacacgagcgattcttcccttcccagaaccaca
gagcctctgaaaagcttccacccacagataaagtggttccagaaagatgatgtggtcatc
ctgaagataagaataaggaatgtaaaagattacaaatgtaaatatttccaggatagagtt
gttttcagtggctgggcaggagagaagttttacttggctgacatggagctgcaggccaac
gtagtaaaagatgcctgcagatgcacgatcgtgaatgaggagcctgtgatcactcttgca
aaagaaaccaggggaccttggtgtggcttactcaaacagaaaaatcctaatgtggctttt
gatttcgatcactgggaagaatgtgaagaggacagccagctcccacaggttgtgaattct
aaaaacctgccatgcacggtggcagaggtggctgagagcagcgggcagccgtcggaggat
gacggaagtgagagcgaatga
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